BLASTX nr result

ID: Sinomenium22_contig00028108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00028108
         (526 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    69   9e-10
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    62   6e-08
gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     61   1e-07
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]        60   2e-07
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             59   9e-07
gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]     55   8e-06

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +3

Query: 381 RGALEQR*ELSPCDFEVTGSSHGNSLLL-CKVRLRTIDPKWSDPSPGP 521
           +G+L    +L PCD EVTGSS GNSLLL C+ RLRTIDPKWSDPSP P
Sbjct: 3   KGSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDP 50


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/40 (77%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
 Frame = +3

Query: 405 ELSPCDFEVTGSSHGNSLLL-CKVRLRTIDPKWSDPSPGP 521
           EL PCD EVTGSS GNSLL  C+ RLRTID KWSDPSP P
Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673


>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +3

Query: 381 RGALEQR*ELSPCDFEVTGSSHGNSLLLCKVRLRTIDPKWSDPSPGP 521
           +G+L    +L PCD EV GSS GNSLL    RLRTIDPKWSDPSP P
Sbjct: 352 KGSLGAVVKLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDP 398


>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
          Length = 1176

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +3

Query: 363 GEFLG*RGALEQR*ELSPCDFEVTGSSHGNSLLL-CKVRLRTIDPKWSDPSPGP 521
           GE  G  GA+ +   L PCD EVTGSS GNSLL  C+  LRTIDPKWSDP P P
Sbjct: 523 GEMNGSLGAVVK---LLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDP 573


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = -1

Query: 520 GPGEGSDHFGSIVRNLTLH-SKRLFP*LEPVTSKSHGDNSYRCSKAP 383
           G GEGSDHFGSIVR+L LH  KRLFP LEPVTS S G+N     + P
Sbjct: 63  GSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLP 109


>gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]
          Length = 181

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = -1

Query: 505 SDHFGSIVRNLTLH-SKRLFP*LEPVTSKSHGDNSYRCSKAPL 380
           SDHFGSIVR L+LH  KRLFP LEPVTS       YRC++APL
Sbjct: 102 SDHFGSIVRTLSLHFCKRLFPGLEPVTSLVTRQQLYRCARAPL 144


Top