BLASTX nr result
ID: Sinomenium22_contig00028021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028021
(657 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-16
emb|CBI15289.3| unnamed protein product [Vitis vinifera] 57 1e-15
ref|XP_003525037.2| PREDICTED: pentatricopeptide repeat-containi... 53 1e-14
ref|XP_007157658.1| hypothetical protein PHAVU_002G087700g [Phas... 58 3e-14
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,... 55 1e-13
ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi... 57 7e-13
ref|XP_002321537.1| pentatricopeptide repeat-containing family p... 57 3e-12
ref|XP_006578589.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-11
ref|XP_003523047.2| PREDICTED: pentatricopeptide repeat-containi... 54 3e-11
ref|XP_006578590.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-11
gb|EXC34220.1| hypothetical protein L484_010090 [Morus notabilis] 54 1e-10
gb|EYU35898.1| hypothetical protein MIMGU_mgv1a019674mg [Mimulus... 57 1e-09
ref|XP_006306742.1| hypothetical protein CARUB_v10008274mg [Caps... 46 3e-09
ref|XP_006416553.1| hypothetical protein EUTSA_v10009547mg [Eutr... 45 4e-09
ref|XP_006390391.1| hypothetical protein EUTSA_v10018113mg [Eutr... 45 5e-09
gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana] 46 5e-08
ref|NP_001185030.1| pentatricopeptide repeat-containing protein ... 46 5e-08
ref|NP_173324.1| pentatricopeptide repeat-containing protein [Ar... 46 5e-08
ref|NP_177613.1| pentatricopeptide repeat-containing protein [Ar... 44 5e-08
ref|XP_002890305.1| pentatricopeptide repeat-containing protein ... 46 8e-08
>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 57.0 bits (136), Expect(2) = 2e-16
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -3
Query: 124 GSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
G +AL NLNC + YQANQ+LKQ+QD+ VA GFFYW+K
Sbjct: 330 GPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLK 370
Score = 55.5 bits (132), Expect(2) = 2e-16
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 13/196 (6%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVK 478
G+ Q+ VD ++ + + S+N K R FSKV+A S N+A S + H + K
Sbjct: 159 GMLKLPQNCMVDPTKPLSKIKSTNIKPIRKGKFSKVRAESSANIAAASNSTSSYHSTRGK 218
Query: 477 SEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSD 298
+K GSV+ +W + S+S N
Sbjct: 219 GDKSGSVKGCSHVGD--------TWTRNTVDTRSLSSDTHNKRSMPQKSKAYSNYS---- 266
Query: 297 RLTPGCEVTDDIRYVSNIQKP-PKFTGEIS---TKP---------APLAKQSNNDRQVVE 157
T + + SN++ P+F G I+ +KP AP+++Q + VVE
Sbjct: 267 --------TSNSNFNSNVRNSEPRFVGGIAGGFSKPLRDTKMIGIAPVSRQFGSSGHVVE 318
Query: 156 SVFHTLKHLKWGPAAE 109
+V L+ L WGPAAE
Sbjct: 319 NVSRILRQLSWGPAAE 334
>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 57.0 bits (136), Expect(2) = 1e-15
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -3
Query: 124 GSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
G +AL NLNC + YQANQ+LKQ+QD+ VA GFFYW+K
Sbjct: 339 GPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLK 379
Score = 52.4 bits (124), Expect(2) = 1e-15
Identities = 47/183 (25%), Positives = 72/183 (39%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVK 478
G+ Q+ VD ++ + + S+N K R FSKV+A S N+A S + H + K
Sbjct: 186 GMLKLPQNCMVDPTKPLSKIKSTNIKPIRKGKFSKVRAESSANIAAASNSTSSYHSTRGK 245
Query: 477 SEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSD 298
+K GSV+ +W + S+S N
Sbjct: 246 GDKSGSVKGCSHVGD--------TWTRNTVDTRSLSSDTHNKRSMPQKSKAYSNYS---- 293
Query: 297 RLTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGP 118
T + + SN + K G AP+++Q + VVE+V L+ L WGP
Sbjct: 294 --------TSNSNFNSNPLRDTKMIGI-----APVSRQFGSSGHVVENVSRILRQLSWGP 340
Query: 117 AAE 109
AAE
Sbjct: 341 AAE 343
>ref|XP_003525037.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 876
Score = 53.1 bits (126), Expect(2) = 1e-14
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 15/199 (7%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVK 478
G+ S +++ VD++R+ PN+ SSN K + ENF+ V R SV+ + H K K
Sbjct: 164 GILSYSKNCMVDTARTPPNIRSSNVKQIKRENFTSVHPRPSVSTNSRSKRAGHHHSGKCK 223
Query: 477 SEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSD 298
+K + + PS + K++ +P I
Sbjct: 224 GDKSNLGKGFKHIPS-----------------SGMEKSVVSPNI---------PLNNHEH 257
Query: 297 RLTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNN---------------DRQV 163
R P T V+N + + + P K+S N +R++
Sbjct: 258 RAFPQRTTTKSNHIVTNFGSYMRASNTQMVEVVPTIKESFNKHPRDLKMSARTAPMNRRI 317
Query: 162 VESVFHTLKHLKWGPAAER 106
VE V L+ L+WGP AE+
Sbjct: 318 VEVVSDILRQLRWGPTAEK 336
Score = 53.1 bits (126), Expect(2) = 1e-14
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G KAL NLN S+ YQANQILKQLQD SVA GFF W++
Sbjct: 329 RWGPTAEKALYNLNFSMDAYQANQILKQLQDPSVALGFFDWLR 371
>ref|XP_007157658.1| hypothetical protein PHAVU_002G087700g [Phaseolus vulgaris]
gi|561031073|gb|ESW29652.1| hypothetical protein
PHAVU_002G087700g [Phaseolus vulgaris]
Length = 881
Score = 58.2 bits (139), Expect(2) = 3e-14
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
K G KAL NLN S+ YQANQILKQLQD+SVA FFYW+K
Sbjct: 334 KWGPATEKALCNLNFSIDAYQANQILKQLQDHSVALSFFYWLK 376
Score = 46.6 bits (109), Expect(2) = 3e-14
Identities = 45/203 (22%), Positives = 73/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNV-AGGLESKNRSHDLKV 481
G+ + ++++ VD R++P++ SSN K R E+F+ V + V+ G + N H K
Sbjct: 165 GILNYSKNYMVDPGRALPSIRSSNVKQIRKESFTAVHPKPPVSTHPGPSKPTNNHHGAKG 224
Query: 480 KSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXS 301
K +K + K + +P I
Sbjct: 225 KGDKSNLAKGF--------------------------KPVASPGIEKSGEAPNIPVNSHD 258
Query: 300 DRLTPGCEVTDDIRYVSNI-----QKPPKFTGE-------------ISTKPAPLAKQSNN 175
R P T R+V+N P+ G ++ AP + N
Sbjct: 259 RRALPQRTRTRPNRFVTNFGSNMPSSNPQMAGSFKESFCKYTRNVNMAAGIAPSNRHFTN 318
Query: 174 DRQVVESVFHTLKHLKWGPAAER 106
VV+ V L+ LKWGPA E+
Sbjct: 319 SGHVVDMVKDMLRQLKWGPATEK 341
>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 876
Score = 54.7 bits (130), Expect(2) = 1e-13
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NLN S+ YQANQ+LKQLQD++VA FFYW+K
Sbjct: 329 RWGPAAEEALANLNYSMDPYQANQVLKQLQDHTVALNFFYWLK 371
Score = 47.8 bits (112), Expect(2) = 1e-13
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 5/185 (2%)
Frame = -1
Query: 648 SSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSEK 469
+S ++ VD +R V SSN K R EN SKV + S A + N + KSEK
Sbjct: 162 NSPKNCMVDPTRPQSTVRSSNVKPIRRENCSKVYPKASPEAAVSSSTSNYD-STRDKSEK 220
Query: 468 LGSVEALEFGPSFE*FYREISWDS*SNFR-CSVSKAICNPEIRXXXXXXXXXXXXXSDRL 292
++ + R + + ++ + CS++ C+ I +
Sbjct: 221 SSFIKGSK---------RVSNTPAGNSVKTCSIASDTCDRRIIPQKSKGQSNRSTANFNA 271
Query: 291 TPGCEVTDDIRY----VSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKW 124
T D +Y + +KPP+ T ++ P ++ ++ +VE+V H L+ ++W
Sbjct: 272 NVQTVQTSDTKYGEYVAEDYRKPPRET-KMPVVRVPSTRRFASNGHIVENVAHILRQIRW 330
Query: 123 GPAAE 109
GPAAE
Sbjct: 331 GPAAE 335
>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 57.0 bits (136), Expect(2) = 7e-13
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G KAL NLN S+ YQANQILKQLQD+SVA FFYW+K
Sbjct: 335 RWGPATEKALYNLNFSIDAYQANQILKQLQDHSVALSFFYWLK 377
Score = 43.1 bits (100), Expect(2) = 7e-13
Identities = 44/203 (21%), Positives = 73/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNV-AGGLESKNRSHDLKV 481
G+ + +++ VD +R++P + SSN + R ENF+ V + V G + N +H K
Sbjct: 166 GILNYSKNCMVDPARALPKIRSSNVQQIRTENFTSVHPKPPVPAHPGPSKHTNNNHGAKG 225
Query: 480 KSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXS 301
K+ K + ++ + K+ P I
Sbjct: 226 KANKSNLAKGFKYVAA-----------------SGTEKSGAAPNIPVNNHDR-------- 260
Query: 300 DRLTPGCEVTDDIRYVSNIQKPPKFTGEISTKP------------------APLAKQSNN 175
R P T+ +V+N + + +P AP + N
Sbjct: 261 -RALPQRTRTNSNHFVTNFGSNMQSSNPQMARPFKESFNKHTRDLNMPAGIAPTRRHFTN 319
Query: 174 DRQVVESVFHTLKHLKWGPAAER 106
VVE V LK L+WGPA E+
Sbjct: 320 SGHVVEGVKDILKQLRWGPATEK 342
>ref|XP_002321537.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222868533|gb|EEF05664.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 834
Score = 56.6 bits (135), Expect(2) = 3e-12
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NLNC + YQANQ+LKQLQD++VA GFF+W+K
Sbjct: 287 RWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLK 329
Score = 41.2 bits (95), Expect(2) = 3e-12
Identities = 43/182 (23%), Positives = 69/182 (37%)
Frame = -1
Query: 654 VFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKS 475
V +ST + +D +R + N+ SSN K R ENF+K S + G + + +K +
Sbjct: 144 VINSTINCMIDPTRQLSNIKSSNVKPIRRENFTKAYPNSSAEIPVGSNAAVNYNSMKDRG 203
Query: 474 EKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSDR 295
K V + S + S DS S + K P+
Sbjct: 204 NKSSFVRGFKQVSSIA---ADSSLDSHSLPSDAFDKRRTIPQ------------------ 242
Query: 294 LTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
R + + P ++ A A+Q + VVE+V L+ L+WGP+
Sbjct: 243 -----------RLKAQPNRRPSRDTKMPAVVARSARQFVSTGHVVENVSQILRQLRWGPS 291
Query: 114 AE 109
AE
Sbjct: 292 AE 293
>ref|XP_006578589.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like isoform X2 [Glycine max]
Length = 898
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G K L NLN S+ YQANQILKQLQD+SVA GFF W+K
Sbjct: 351 RWGPATEKTLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLK 393
Score = 40.4 bits (93), Expect(2) = 3e-11
Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNV-AGGLESKNRSHDLKV 481
G+ + ++++ VD +R++P + SSN + + ENF+ V + V G + N H K
Sbjct: 182 GILNYSKNYMVDPARALPKIRSSNVQQIKKENFTAVHPKPPVPTHPGPSKHTNNHHGAKG 241
Query: 480 KSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXS 301
K++K + + S K+ P I
Sbjct: 242 KADKSNLAKGFKHVAS-----------------SGTEKSGAAPNIPVNNHDR-------- 276
Query: 300 DRLTPGCEVTDDIRYVSNI-----QKPPKFTGEISTK----------PA---PLAKQSNN 175
R P T +V+N P+ G PA P + N
Sbjct: 277 -RALPQRTRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTRDLNMPAGIVPTKRHFTN 335
Query: 174 DRQVVESVFHTLKHLKWGPAAER 106
VVE V LK L+WGPA E+
Sbjct: 336 SGHVVEVVKDILKQLRWGPATEK 358
>ref|XP_003523047.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like isoform X1 [Glycine max]
Length = 882
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G K L NLN S+ YQANQILKQLQD+SVA GFF W+K
Sbjct: 335 RWGPATEKTLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLK 377
Score = 40.4 bits (93), Expect(2) = 3e-11
Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNV-AGGLESKNRSHDLKV 481
G+ + ++++ VD +R++P + SSN + + ENF+ V + V G + N H K
Sbjct: 166 GILNYSKNYMVDPARALPKIRSSNVQQIKKENFTAVHPKPPVPTHPGPSKHTNNHHGAKG 225
Query: 480 KSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXS 301
K++K + + S K+ P I
Sbjct: 226 KADKSNLAKGFKHVAS-----------------SGTEKSGAAPNIPVNNHDR-------- 260
Query: 300 DRLTPGCEVTDDIRYVSNI-----QKPPKFTGEISTK----------PA---PLAKQSNN 175
R P T +V+N P+ G PA P + N
Sbjct: 261 -RALPQRTRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTRDLNMPAGIVPTKRHFTN 319
Query: 174 DRQVVESVFHTLKHLKWGPAAER 106
VVE V LK L+WGPA E+
Sbjct: 320 SGHVVEVVKDILKQLRWGPATEK 342
>ref|XP_006578590.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like isoform X3 [Glycine max]
Length = 879
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G K L NLN S+ YQANQILKQLQD+SVA GFF W+K
Sbjct: 332 RWGPATEKTLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLK 374
Score = 40.4 bits (93), Expect(2) = 3e-11
Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 657 GVFSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNV-AGGLESKNRSHDLKV 481
G+ + ++++ VD +R++P + SSN + + ENF+ V + V G + N H K
Sbjct: 163 GILNYSKNYMVDPARALPKIRSSNVQQIKKENFTAVHPKPPVPTHPGPSKHTNNHHGAKG 222
Query: 480 KSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXS 301
K++K + + S K+ P I
Sbjct: 223 KADKSNLAKGFKHVAS-----------------SGTEKSGAAPNIPVNNHDR-------- 257
Query: 300 DRLTPGCEVTDDIRYVSNI-----QKPPKFTGEISTK----------PA---PLAKQSNN 175
R P T +V+N P+ G PA P + N
Sbjct: 258 -RALPQRTRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTRDLNMPAGIVPTKRHFTN 316
Query: 174 DRQVVESVFHTLKHLKWGPAAER 106
VVE V LK L+WGPA E+
Sbjct: 317 SGHVVEVVKDILKQLRWGPATEK 339
>gb|EXC34220.1| hypothetical protein L484_010090 [Morus notabilis]
Length = 872
Score = 54.3 bits (129), Expect(2) = 1e-10
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NLN ++ +QANQ+LKQLQD++VA GFFYW+K
Sbjct: 325 RWGRAAEEALENLNYAMDAFQANQVLKQLQDHNVALGFFYWLK 367
Score = 38.1 bits (87), Expect(2) = 1e-10
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
Frame = -1
Query: 657 GVFSST--QSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLK 484
G+F++ Q+ VD +R ++ SS+ + +NFS V R SV A N + K
Sbjct: 157 GIFNNNLPQNCMVDPARLSTSIRSSHVNHVKRKNFSGVHPRPSVEAA---VQYNSTSSTK 213
Query: 483 VKSEKLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXX 304
K K SV+ + P+ SW + S + + +
Sbjct: 214 SKDSKSSSVKGVNNVPNTR---NGNSWATRSVPAEARDRRAIPNRTKACLNSFKADFSSD 270
Query: 303 SDRLTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKW 124
S++ T G V + +PP+ T AP+ + N VVE V H L L+W
Sbjct: 271 SNQSTDGGNVGFGNK---GFNRPPREMN-FPTGYAPIKRPYANTANVVERVSHMLHGLRW 326
Query: 123 GPAAE 109
G AAE
Sbjct: 327 GRAAE 331
>gb|EYU35898.1| hypothetical protein MIMGU_mgv1a019674mg [Mimulus guttatus]
Length = 846
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = -3
Query: 109 KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+AL LNC+L YQANQILKQLQD +VA GFFYW+K
Sbjct: 306 EALCKLNCTLDAYQANQILKQLQDYTVALGFFYWLK 341
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 240 KPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPAAE 109
K + T + T+PA A+ + +VESV L HL+WGP E
Sbjct: 263 KDIRHTKVVITRPAQ-ARPFSTSSPIVESVSRILHHLQWGPPTE 305
>ref|XP_006306742.1| hypothetical protein CARUB_v10008274mg [Capsella rubella]
gi|482575453|gb|EOA39640.1| hypothetical protein
CARUB_v10008274mg [Capsella rubella]
Length = 878
Score = 46.2 bits (108), Expect(2) = 3e-09
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NL+ + YQANQ+LKQ+ D A GFFYW+K
Sbjct: 331 RWGPAAEEALQNLDFRIDAYQANQVLKQMNDYGNALGFFYWLK 373
Score = 41.6 bits (96), Expect(2) = 3e-09
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F +S+ VD +R I +V SSN K+ R E+F+KV R + + + +N S + +
Sbjct: 182 FGFGKSYMVDPTRPISSVKSSNVKAIRREHFAKVYPRSAAKESSVGKIRNSSSNFR---- 237
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSDRL 292
G+ EA G F ++++S V K + P ++
Sbjct: 238 --GAKEAERTG--FVKGFKQVS-------NSGVGKLL--PTTNNTYGKRTSVLQRPNN-- 282
Query: 291 TPGCEVTDDIRYVSN-IQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
D R+V N T ++ A ++Q N +VE+V LK +WGPA
Sbjct: 283 -------DSNRFVPNGFSNSSMDTVKVPPGAALTSRQYCNSGHIVENVSSVLKRFRWGPA 335
Query: 114 AE 109
AE
Sbjct: 336 AE 337
>ref|XP_006416553.1| hypothetical protein EUTSA_v10009547mg [Eutrema salsugineum]
gi|557094324|gb|ESQ34906.1| hypothetical protein
EUTSA_v10009547mg [Eutrema salsugineum]
Length = 847
Score = 45.4 bits (106), Expect(2) = 4e-09
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -3
Query: 106 ALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
AL NL + YQANQ+LKQ+ D+ A GFFYW+K
Sbjct: 308 ALQNLGLRMDPYQANQVLKQMNDHGNALGFFYWLK 342
Score = 42.0 bits (97), Expect(2) = 4e-09
Identities = 43/181 (23%), Positives = 77/181 (42%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F ++S VD +R I +V SSN K+ R E+F+KV R + + + +N + + +
Sbjct: 161 FGFSKSCMVDPTRPITSVKSSNVKAIRREHFAKVYPRSAAKESSMDKIRNPTSNFR---- 216
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSDRL 292
G+ EA G F ++++S + +N + + P I
Sbjct: 217 --GAKEAERAG--FVKGFKQVSITATNNTYVKRTSMLQRPNI------------------ 254
Query: 291 TPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPAA 112
D R+VSN ++ + + ++Q N +VE+V L+ +WGP A
Sbjct: 255 -------DSNRFVSNGSSTEMM--KVHSGTSLTSRQYCNSGHIVENVSSVLRRFRWGPDA 305
Query: 111 E 109
E
Sbjct: 306 E 306
>ref|XP_006390391.1| hypothetical protein EUTSA_v10018113mg [Eutrema salsugineum]
gi|557086825|gb|ESQ27677.1| hypothetical protein
EUTSA_v10018113mg [Eutrema salsugineum]
Length = 859
Score = 45.1 bits (105), Expect(2) = 5e-09
Identities = 52/183 (28%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Frame = -1
Query: 639 QSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSEKLGS 460
+S VD +R I +V SSN K R E+ +KV R + + N S KV +E+ G
Sbjct: 156 KSRMVDPTRPISSVKSSNVKVIRREHLAKVYPRSASKDSPDQVHVNNSRGTKV-AERSGF 214
Query: 459 VEALEF------GPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSD 298
V+ L G FE + + ++ S R S+ + P I
Sbjct: 215 VKGLNHASNDVAGNPFE--AQGLPTNTASGKRKSMPQ---RPSI--------------DS 255
Query: 297 RLTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGP 118
R G + V KP + ++ AP +Q N VVE+V L+ KWGP
Sbjct: 256 RHASGGYDYNVHSSVEGFSKPSREMVRVTPGTAPTPRQYGNSGYVVENVSSILRRFKWGP 315
Query: 117 AAE 109
AAE
Sbjct: 316 AAE 318
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
K G +AL + + YQANQ+LKQ+ + + A GFFYW+K
Sbjct: 312 KWGPAAEEALQSFGFRMDAYQANQVLKQMDNYANALGFFYWLK 354
>gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 46.2 bits (108), Expect(2) = 5e-08
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NL + YQANQ+LKQ+ D A GFFYW+K
Sbjct: 430 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK 472
Score = 37.4 bits (85), Expect(2) = 5e-08
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F +S VD +R I +V SSN K+ R E+F+K+ R + + ++N S + +
Sbjct: 281 FGLPKSCMVDPTRPISSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFR---- 336
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAI-CNPEIRXXXXXXXXXXXXXSDR 295
G+ EA G F +R++S V K++ S+R
Sbjct: 337 --GAKEAERTG--FVKGFRQVS-------NSVVGKSLPTTNNTYGKRTSVLQRPHIDSNR 385
Query: 294 LTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
P + + K P T A ++Q N +VE+V L+ +WGPA
Sbjct: 386 FVPSGFSNSSVE----MMKGPSGT-------ALTSRQYCNSGHIVENVSSVLRRFRWGPA 434
Query: 114 AE 109
AE
Sbjct: 435 AE 436
>ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 46.2 bits (108), Expect(2) = 5e-08
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NL + YQANQ+LKQ+ D A GFFYW+K
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK 355
Score = 37.4 bits (85), Expect(2) = 5e-08
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F +S VD +R I +V SSN K+ R E+F+K+ R + + ++N S + +
Sbjct: 164 FGLPKSCMVDPTRPISSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFR---- 219
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAI-CNPEIRXXXXXXXXXXXXXSDR 295
G+ EA G F +R++S V K++ S+R
Sbjct: 220 --GAKEAERTG--FVKGFRQVS-------NSVVGKSLPTTNNTYGKRTSVLQRPHIDSNR 268
Query: 294 LTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
P + + K P T A ++Q N +VE+V L+ +WGPA
Sbjct: 269 FVPSGFSNSSVE----MMKGPSGT-------ALTSRQYCNSGHIVENVSSVLRRFRWGPA 317
Query: 114 AE 109
AE
Sbjct: 318 AE 319
>ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g18900 gi|26450017|dbj|BAC42129.1| unknown protein
[Arabidopsis thaliana] gi|28827402|gb|AAO50545.1|
unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 46.2 bits (108), Expect(2) = 5e-08
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NL + YQANQ+LKQ+ D A GFFYW+K
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK 355
Score = 37.4 bits (85), Expect(2) = 5e-08
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F +S VD +R I +V SSN K+ R E+F+K+ R + + ++N S + +
Sbjct: 164 FGLPKSCMVDPTRPISSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFR---- 219
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAI-CNPEIRXXXXXXXXXXXXXSDR 295
G+ EA G F +R++S V K++ S+R
Sbjct: 220 --GAKEAERTG--FVKGFRQVS-------NSVVGKSLPTTNNTYGKRTSVLQRPHIDSNR 268
Query: 294 LTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
P + + K P T A ++Q N +VE+V L+ +WGPA
Sbjct: 269 FVPSGFSNSSVE----MMKGPSGT-------ALTSRQYCNSGHIVENVSSVLRRFRWGPA 317
Query: 114 AE 109
AE
Sbjct: 318 AE 319
>ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74750 gi|5882748|gb|AAD55301.1|AC008263_32 Contains
2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 43.9 bits (102), Expect(2) = 5e-08
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
K G +AL N + YQANQ+LKQ+ + + A GFFYW+K
Sbjct: 308 KWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLK 350
Score = 39.7 bits (91), Expect(2) = 5e-08
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 2/179 (1%)
Frame = -1
Query: 639 QSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQS--VNVAGGLESKNRSHDLKVKSEKL 466
+S VD +R I V SSN K R E+ +KV R + V + +K S+D+
Sbjct: 160 KSCMVDPTRPISGVKSSNVKVIRREHLAKVYPRSADRVPINSSPGTKQASNDVA------ 213
Query: 465 GSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAICNPEIRXXXXXXXXXXXXXSDRLTP 286
G SFE ++ ++ S R + + R DR
Sbjct: 214 --------GKSFE--AHDLLSNNVSGKRKIMPQRPYTDSTRYASGGCDYSVHSSDDRTI- 262
Query: 285 GCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPAAE 109
I V KP + +++ + AP +Q N VVE+V L+ KWG AAE
Sbjct: 263 -------ISSVEGFGKPSREMMKVTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAE 314
>ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336147|gb|EFH66564.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 860
Score = 46.2 bits (108), Expect(2) = 8e-08
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -3
Query: 130 KMGSCC*KALGNLNCSLGVYQANQILKQLQDNSVAHGFFYWVK 2
+ G +AL NL + YQANQ+LKQ+ D A GFFYW+K
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK 355
Score = 36.6 bits (83), Expect(2) = 8e-08
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 1/182 (0%)
Frame = -1
Query: 651 FSSTQSHKVDSSRSIPNVGSSNTKSHRDENFSKVQARQSVNVAGGLESKNRSHDLKVKSE 472
F +S VD +R I +V SS+ K+ R E FSKV R + + +++N S + +
Sbjct: 164 FGLPKSCMVDPTRPISSVKSSSVKAIRREQFSKVYPRSAAKESSIGKTRNPSSNFR---- 219
Query: 471 KLGSVEALEFGPSFE*FYREISWDS*SNFRCSVSKAI-CNPEIRXXXXXXXXXXXXXSDR 295
G+ EA G F +R++S V K++ S+R
Sbjct: 220 --GAKEAERTG--FVKGFRQVS-------NSMVGKSLPTTNNTYGKRTSVLQRPHIDSNR 268
Query: 294 LTPGCEVTDDIRYVSNIQKPPKFTGEISTKPAPLAKQSNNDRQVVESVFHTLKHLKWGPA 115
P + V PP A ++Q N +VE+V L+ +WGPA
Sbjct: 269 FVPSGFSNSSMEMVKG---PPG--------TALTSRQYCNSGYIVENVSSVLRRFRWGPA 317
Query: 114 AE 109
AE
Sbjct: 318 AE 319