BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00027914
         (1312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [S...   334   6e-89
ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containi...   331   4e-88
gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indi...   325   4e-86
gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japo...   317   1e-83
gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]        310   7e-82
ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containi...   271   4e-70
ref|XP_004237758.1| PREDICTED: pentatricopeptide repeat-containi...   268   3e-69
ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group] g...   263   2e-67
gb|EXB90556.1| hypothetical protein L484_001710 [Morus notabilis]     261   4e-67
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   260   8e-67
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   259   2e-66
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-64
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   253   1e-64
ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi...   251   4e-64
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     251   6e-64
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...   251   6e-64
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   246   2e-62
emb|CBI19955.3| unnamed protein product [Vitis vinifera]              246   2e-62
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...   244   6e-62
gb|AER41579.1| CRR4 [Oryza brachyantha]                               244   8e-62

>ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
            gi|241942283|gb|EES15428.1| hypothetical protein
            SORBIDRAFT_07g028280 [Sorghum bicolor]
          Length = 498

 Score =  334 bits (856), Expect = 6e-89
 Identities = 171/333 (51%), Positives = 229/333 (68%), Gaps = 4/333 (1%)
 Frame = -2

Query: 990  LSGLKDQAFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVS 811
            LS L    F S+ TFLHN LI   + S  PR     +S LL +   PD FTFP L+K  S
Sbjct: 44   LSSLYFPLFPSSATFLHNLLIHASAASPSPRLSFAAFSSLLRSGYLPDHFTFPPLVK--S 101

Query: 810  ASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNL-DI 634
            AS++     R G QV+AQ    GF +D FVVN+L+++Y+AF+D  S + +F+    + D+
Sbjct: 102  ASRLS-SFPRTGAQVYAQAARRGFLADTFVVNSLLAMYAAFRDTASMRAVFESCAEVADV 160

Query: 633  VSWNTLIDGYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMP-I 457
            VSWNT++ GYAK G I  ARR FD+MP  N +SW+VM+  Y   GELD A+ +FDRMP I
Sbjct: 161  VSWNTVVFGYAKCGEIGNARRVFDEMPHRNGVSWSVMVGAYAAAGELDVAREMFDRMPAI 220

Query: 456  CRNIATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDE 277
             RNI TWN +++GF + G L LA+ +FDEMP RNI+SWN+M+  YA  G++ +AR +FD 
Sbjct: 221  GRNIITWNLMVTGFGRHGLLPLARKMFDEMPIRNIVSWNAMLRGYAMNGEMDVARELFDV 280

Query: 276  MPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQ 97
            MPE+DV SW+CMISGYAQ  +    L+LF+ M   G++RPNEVT+++VL+ CAHLTAL++
Sbjct: 281  MPEKDVVSWTCMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTALEE 340

Query: 96   GCWIHAYIQRNGMRLSD--NLGAALIDMYAKCG 4
            G W H +I ++ M L +  NLGAALIDMYAKCG
Sbjct: 341  GRWAHVFIDKHKMVLDNEFNLGAALIDMYAKCG 373


>ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Brachypodium distachyon]
          Length = 555

 Score =  331 bits (849), Expect = 4e-88
 Identities = 168/325 (51%), Positives = 225/325 (69%), Gaps = 4/325 (1%)
 Frame = -2

Query: 966  FSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDT 787
            F S+ TFLHN LIR  + S  PR     +S +L +   PD FTFP LLK  SAS++    
Sbjct: 38   FPSSCTFLHNLLIRASATSPSPRLAFAAFSSILRSGDTPDRFTFPSLLK--SASRLA-SF 94

Query: 786  VREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNL-DIVSWNTLID 610
             R G QVHAQ V  G   DVFVVNTL+++Y+AF+D  S + +FD    + D+V+WNT++ 
Sbjct: 95   PRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLG 154

Query: 609  GYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMP-ICRNIATWN 433
            GY K G I  ARR F+QMP+ N +SW+ M+  Y   GELD A+ +FD MP I RN+ +WN
Sbjct: 155  GYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAIGRNVVSWN 214

Query: 432  SLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFS 253
            S+I+GF++ G L LA+ +FDEMP RN++SWN+M+  YA  G++  AR +FD MPE+DV S
Sbjct: 215  SMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVS 274

Query: 252  WSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYI 73
            W+CMISGYAQ     + L+LF+ M  + NV PNEVT+++VL+ CAHLTAL++G W HA+I
Sbjct: 275  WTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFI 334

Query: 72   QRNGMRLSD--NLGAALIDMYAKCG 4
             ++ M L    NLGAALIDMY+KCG
Sbjct: 335  DKHKMVLDSEFNLGAALIDMYSKCG 359



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 87/383 (22%), Positives = 154/383 (40%), Gaps = 41/383 (10%)
 Frame = -2

Query: 1119 LARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQAFSSTTTFLH 940
            LA    TG   H+ ++ + +   VF  NT   +YA    + R +  + D           
Sbjct: 91   LASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFR-DTRSMREVFDSCAGVADLVTW 149

Query: 939  NTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVHA 760
            NT++ GY +     +   V+  +     + +  ++  ++ A + +  ELD  RE      
Sbjct: 150  NTMLGGYVKCGEIGEARRVFEQM----PQRNGVSWSAMVGAYAGAG-ELDVAREMFDEMP 204

Query: 759  QIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIHL 580
             I  N     V   N++++ ++    +  A+ +FD     ++VSWNT++ GYA +G ++ 
Sbjct: 205  AIGRN-----VVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMND 259

Query: 579  ARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNI--------------- 445
            AR  FD+MPE + +SWT MISGY +         LF  M    N+               
Sbjct: 260  ARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACA 319

Query: 444  -------ATWN-------------------SLISGFSKSGFLSLAQNLFDEMPSRNIISW 343
                     W                    +LI  +SK G   LA  +F  +  +N+ +W
Sbjct: 320  HLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAW 379

Query: 342  NSMISAYAQRGQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNV 163
            N++I+  A  G ++ +  +F++M                   + G+              
Sbjct: 380  NALITGLAVNGDVRSSIDVFEQM------------------RRSGE-------------- 407

Query: 162  RPNEVTLMNVLAVCAHLTALDQG 94
            +PN +T + VL  CAH   +D+G
Sbjct: 408  KPNGITFVGVLTACAHGGLVDEG 430


>gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
          Length = 567

 Score =  325 bits (832), Expect = 4e-86
 Identities = 163/324 (50%), Positives = 220/324 (67%), Gaps = 4/324 (1%)
 Frame = -2

Query: 963  SSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDTV 784
            SS+ TFLHN LIR  + S  PR     +S LL     PD FT P LL +           
Sbjct: 55   SSSATFLHNILIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPA---FP 111

Query: 783  REGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNL-DIVSWNTLIDG 607
            R G QVHAQ V  GF +DVFVVN L+++Y A +D  S + +F     + D+VSWNT+I G
Sbjct: 112  RTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGG 171

Query: 606  YAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMP-ICRNIATWNS 430
            Y K G +  A+R FD+MP  N +SW+ M+ GY   GELD A+ +FDRMP I RN+ TWNS
Sbjct: 172  YVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTWNS 231

Query: 429  LISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +++GF++ G L LA+ +FDEMP RN++SWN+M+  Y+    +  AR +FD MPE+DV SW
Sbjct: 232  MVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSW 291

Query: 249  SCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQ 70
            +CMISGYAQ  +  D L+LF+ M  + NV+PNEVT+++VL+ CA+LTAL++G W+HA+I 
Sbjct: 292  TCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFID 351

Query: 69   RNGMRLSD--NLGAALIDMYAKCG 4
            ++ M L++  NLGAALIDMYAKCG
Sbjct: 352  KHKMVLNNEYNLGAALIDMYAKCG 375


>gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
          Length = 567

 Score =  317 bits (811), Expect = 1e-83
 Identities = 160/324 (49%), Positives = 217/324 (66%), Gaps = 4/324 (1%)
 Frame = -2

Query: 963  SSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDTV 784
            SS+ TFL   LIR  + S  P      +S LL     PD FT P LL +           
Sbjct: 55   SSSATFLQKILIRASASSASPGLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPA---FP 111

Query: 783  REGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNL-DIVSWNTLIDG 607
            R G QVHAQ V  GF +DVFVVN L+++Y A +D  S + +F     + D+VSWNT+I G
Sbjct: 112  RTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGG 171

Query: 606  YAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMP-ICRNIATWNS 430
            Y K G +  A+R FD+MP  N +SW+ M+ GY   GELD A+ +FDRMP I RN+ TWNS
Sbjct: 172  YVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTWNS 231

Query: 429  LISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +++GF++ G L LA+ +FDEMP RN++SWN+M+  Y+    +  AR +FD MPE+DV SW
Sbjct: 232  MVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSW 291

Query: 249  SCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQ 70
            +CMISGYAQ  +  D L+LF+ M  + NV+PNEVT+++VL+ CA+LTAL++G W+HA+I 
Sbjct: 292  TCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFID 351

Query: 69   RNGMRLSD--NLGAALIDMYAKCG 4
            ++ M L++  NLGAALIDMYAKCG
Sbjct: 352  KHKMVLNNEYNLGAALIDMYAKCG 375


>gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
          Length = 572

 Score =  310 bits (795), Expect = 7e-82
 Identities = 169/382 (44%), Positives = 232/382 (60%), Gaps = 5/382 (1%)
 Frame = -2

Query: 1134 QLNPVLARLLVTGHTHHSLS-LCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQAFSS 958
            +L P+L RLLV G    S   L +++  L             H      +S L    F S
Sbjct: 6    RLLPLLGRLLVVGEIRRSPDYLRRIIPHL-----------PSHPKLAAAVSSLYFPLFPS 54

Query: 957  TTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDTVRE 778
            + TFLHN LIR  + S  PR     +S LL +   PD FTFP L K+ S         R 
Sbjct: 55   SATFLHNLLIRASAASPSPRLSFAAFSSLLRSGHLPDHFTFPPLAKSASKFP---SFPRT 111

Query: 777  GKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFD-LTQNLDIVSWNTLIDGYA 601
            G QVHAQ    G  +D F VN+L+++Y+A +D  S + + +   +  D+VSWNT++ GYA
Sbjct: 112  GAQVHAQAARRGLLADAFAVNSLLAMYAALRDAASMRGVLESCAEAADVVSWNTVVAGYA 171

Query: 600  KSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPIC-RNIATWNSLI 424
            + G +  ARR FD MP  N  SW+ M+  Y   G+LD A+ +FDR P   R++ TWNS++
Sbjct: 172  RCGELGNARRAFDGMPRRNGASWSAMVGAYAAAGQLDVARDMFDRAPAAGRSVVTWNSMV 231

Query: 423  SGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSWSC 244
            +G ++ G L LA+ +FDEMP+RN++SWN+M+  YA  G +  AR +FD MPE+DV SW+C
Sbjct: 232  AGLARHGLLPLARKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTC 291

Query: 243  MISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQRN 64
            M+SGYA+  +   AL+LF+ M   G+VRPNEVT+++V + CA L AL +G W HA+I + 
Sbjct: 292  MVSGYARAGRHAQALELFRTM-QSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKR 350

Query: 63   GMRLSD--NLGAALIDMYAKCG 4
            GM L D  NLGAALIDMYAKCG
Sbjct: 351  GMVLDDGFNLGAALIDMYAKCG 372


>ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score =  271 bits (694), Expect = 4e-70
 Identities = 150/382 (39%), Positives = 230/382 (60%), Gaps = 1/382 (0%)
 Frame = -2

Query: 1146 KTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQA 967
            KT +QL     +++V G  +++  + KL+    FS N   L Y  H+ E           
Sbjct: 13   KTSKQLKETHLQIIVNGLMNNNFIVPKLI---TFSSNFISLDYGLHVFE----------N 59

Query: 966  FSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDT 787
              + T   +NTLI+ +      +  L  Y+H+  ++  P+ FTF FLL+   +     D 
Sbjct: 60   LQNPTLISYNTLIQCFIGKTL-KYALYTYNHMRVSNITPNSFTFTFLLRCFES----FDA 114

Query: 786  VREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQ-DMDSAQNLFDLTQNLDIVSWNTLID 610
            ++ G+ VH+QI   GFES VF  NTLM  Y+    ++ SA+ +FD   + D+VSWNT+I 
Sbjct: 115  LQAGEVVHSQIAKMGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMSDRDVVSWNTMIG 174

Query: 609  GYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNIATWNS 430
             Y   G    A   F+ MPE N ISW  +I+G +K G ++ A+S+F+RMP  +N  +WN+
Sbjct: 175  AYMIHGNQEYALCLFEAMPERNLISWNSVIAGLLKVGNMEMARSVFNRMPE-KNDVSWNT 233

Query: 429  LISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +ISG+ K G +  A+ +FDEMP ++IISW +M+S YA  G ++ AR MFD +PE++V SW
Sbjct: 234  MISGYVKLGDVETARAIFDEMPEKSIISWTAMVSGYATSGDVQSARKMFDRIPEKNVVSW 293

Query: 249  SCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQ 70
            + MI+GY  N+   +AL +F+ ML+ GN +PN+ TL++VL+ C+HL + + G WI ++I+
Sbjct: 294  NAMIAGYVNNHMFDEALSVFQHMLIDGNCKPNQTTLISVLSACSHLGSHEHGKWIDSFIR 353

Query: 69   RNGMRLSDNLGAALIDMYAKCG 4
            +N   LS  LG ALID +AKCG
Sbjct: 354  KNKFDLSVPLGNALIDTFAKCG 375


>ref|XP_004237758.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Solanum lycopersicum]
          Length = 616

 Score =  268 bits (686), Expect = 3e-69
 Identities = 150/382 (39%), Positives = 228/382 (59%), Gaps = 1/382 (0%)
 Frame = -2

Query: 1146 KTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQA 967
            KT +QL     +++V G  +++  + KL+    FS N   L Y  H+ E          +
Sbjct: 13   KTSKQLKETHLQIIVNGLMNNNFIVPKLI---TFSSNFISLDYGLHVFE----------S 59

Query: 966  FSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDT 787
              + T   +NTLI+ +    F +  L  Y+H+  ++  P+ FTF FLL+   +     D 
Sbjct: 60   LENPTLISYNTLIQCFIGKTF-KYALYTYNHMRVSNITPNSFTFTFLLRCFES----FDV 114

Query: 786  VREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQ-DMDSAQNLFDLTQNLDIVSWNTLID 610
            ++ G+ VH+QI   GFES VF  NTLM  Y+    ++ SA+ +FD     D+VSWNT+I 
Sbjct: 115  LQAGEVVHSQIAKLGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMYERDVVSWNTMIG 174

Query: 609  GYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNIATWNS 430
             Y   G    A   F+ MPE N ISW  +I+G +K G ++ A+S+F RMP  +N  +WN 
Sbjct: 175  AYMIHGNQEYALCLFEAMPERNLISWNSVIAGLLKVGNMEMARSVFKRMPE-KNDVSWNM 233

Query: 429  LISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +ISG+ K G +  A+ +FDEMP ++IISW +++S YA  G +  AR MFD +PE++V SW
Sbjct: 234  MISGYVKLGDVETARAIFDEMPEKSIISWTAVVSGYATSGDVLSARKMFDRIPEKNVVSW 293

Query: 249  SCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQ 70
            + MI+GY  N+   +AL +F+ ML+ GN +PN+ TL++VL+ C+HL + + G WI ++I+
Sbjct: 294  NAMIAGYVNNHMFDEALSVFQLMLIDGNCKPNQTTLISVLSACSHLGSHEHGKWIDSFIR 353

Query: 69   RNGMRLSDNLGAALIDMYAKCG 4
            +N   LS  LG ALID +AKCG
Sbjct: 354  KNKFDLSVPLGNALIDTFAKCG 375



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
 Frame = -2

Query: 939 NTLIRGYSRSQFPRQGLLVYS-HLLHTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
           N +I GY  +    + L V+   L+  + KP+  T   +L A S     L +   GK + 
Sbjct: 294 NAMIAGYVNNHMFDEALSVFQLMLIDGNCKPNQTTLISVLSACS----HLGSHEHGKWID 349

Query: 762 AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
           + I  N F+  V + N L+  ++   DM++A+ +F       I++W T+I G A +G   
Sbjct: 350 SFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRCIITWTTMISGLAVNGHCK 409

Query: 582 LARRFFDQM----PELNDISWTVMISGYVKHGELDAAQSLF----DRMPICRNIATWNSL 427
            A   +++M     E +D+ +  ++S     G L+  + +F    D+  I   I  +  +
Sbjct: 410 DALELYEKMCLEGVEPDDVVFIAVLSACTHGGLLEEGKRVFYHMMDKFGIKPRIEHYGCM 469

Query: 426 ISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISA 325
           +    ++G    A +    M    N++ W +++SA
Sbjct: 470 VDLLGRAGKFEEALSFIKSMHLEPNVVIWATLLSA 504


>ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
           gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|42407750|dbj|BAD08896.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113624127|dbj|BAF24072.1|
           Os08g0500600 [Oryza sativa Japonica Group]
          Length = 429

 Score =  263 bits (671), Expect = 2e-67
 Identities = 123/237 (51%), Positives = 173/237 (72%), Gaps = 4/237 (1%)
 Frame = -2

Query: 702 LYSAFQDMDSAQNLFDLTQNL-DIVSWNTLIDGYAKSGAIHLARRFFDQMPELNDISWTV 526
           +Y A +D  S + +F     + D+VSWNT+I GY K G +  A+R FD+MP  N +SW+ 
Sbjct: 1   MYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWST 60

Query: 525 MISGYVKHGELDAAQSLFDRMP-ICRNIATWNSLISGFSKSGFLSLAQNLFDEMPSRNII 349
           M+ GY   GELD A+ +FDRMP I RN+ TWNS+++GF++ G L LA+ +FDEMP RN++
Sbjct: 61  MVGGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLV 120

Query: 348 SWNSMISAYAQRGQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQG 169
           SWN+M+  Y+    +  AR +FD MPE+DV SW+CMISGYAQ  +  D L+LF+ M  + 
Sbjct: 121 SWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTES 180

Query: 168 NVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQRNGMRLSD--NLGAALIDMYAKCG 4
           NV+PNEVT+++VL+ CA+LTAL++G W+HA+I ++ M L++  NLGAALIDMYAKCG
Sbjct: 181 NVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCG 237



 Score = 97.8 bits (242), Expect = 9e-18
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 10/249 (4%)
 Frame = -2

Query: 810 ASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIV 631
           A+  ELD  RE       I  N     V   N++++ ++    +  A+ +FD     ++V
Sbjct: 66  AAAGELDVAREMFDRMPAIGRN-----VVTWNSMVTGFARHGLLPLARKMFDEMPVRNLV 120

Query: 630 SWNTLIDGYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPICR 451
           SWN ++ GY+ +  +  AR  FD MPE + +SWT MISGY + G       LF  M    
Sbjct: 121 SWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTES 180

Query: 450 NI----ATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWN------SMISAYAQRGQLK 301
           N+     T  S++S  +    L   + +   +    ++  N      ++I  YA+ G+  
Sbjct: 181 NVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTD 240

Query: 300 LARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVC 121
           +A  +F+ +  ++V +W+ +I+  A N    D++  F++M   G  +PN++T + VL  C
Sbjct: 241 IAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGE-KPNDITFVGVLTAC 299

Query: 120 AHLTALDQG 94
           +H   +D+G
Sbjct: 300 SHGGLVDEG 308


>gb|EXB90556.1| hypothetical protein L484_001710 [Morus notabilis]
          Length = 616

 Score =  261 bits (668), Expect = 4e-67
 Identities = 148/388 (38%), Positives = 226/388 (58%), Gaps = 4/388 (1%)
 Frame = -2

Query: 1155 KACKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLK 976
            K CK++ +L     ++LV G  H + +L K++  L       F  YA  L         +
Sbjct: 10   KRCKSLRELKQTHLQILVHGLQHCNFTLPKILSLL---SQLGFTDYAFGL--------FR 58

Query: 975  DQAFSSTTTFLHNTLIRGYSRSQFPR---QGLLVYSHLLHTSSKPDDFTFPFLLKAVSAS 805
               F +  T+  NTLI+  S+ +        L VYS +      P+DFTF  LL+    S
Sbjct: 59   SCRFPNVVTY--NTLIKLCSKEKKKDPFDDALRVYSQMKAFGIAPNDFTFTLLLRCFE-S 115

Query: 804  QVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYS-AFQDMDSAQNLFDLTQNLDIVS 628
             +E + ++ G+ VH  IV  G+ S VFV NTL+ LY+ +   +DSA  +FD     D+VS
Sbjct: 116  FLEEEGLKYGEVVHGDIVKLGYCSSVFVQNTLLDLYAKSGGKLDSACRVFDEMPERDVVS 175

Query: 627  WNTLIDGYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPICRN 448
            WN++I  Y   G + LA R F+ M E + ++W  ++SG  K G ++ A S+F RMP  RN
Sbjct: 176  WNSIITSYMARGEVELALRLFESMTEKSIVTWNSVVSGLSKAGNMELALSVFQRMPE-RN 234

Query: 447  IATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPE 268
              +WNSLISG+ + G +  AQ +FD++P + +++W +M+S Y   G L  AR +FD MP 
Sbjct: 235  KVSWNSLISGYIRLGDMKSAQRVFDDVPEKTVVAWTAMVSGYTTIGDLAFARNIFDRMPV 294

Query: 267  RDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCW 88
            ++V SW+ MI+GY  N+    AL +F +ML+ G  +P+E TL+++L+ C+HL +L+ G W
Sbjct: 295  KNVVSWNVMIAGYVHNHMFDQALHMFSQMLIDGKCKPDETTLVSILSACSHLGSLEHGKW 354

Query: 87   IHAYIQRNGMRLSDNLGAALIDMYAKCG 4
            + +YI+RN   LS  LG AL+DM+AKCG
Sbjct: 355  VDSYIKRNNFGLSIPLGNALMDMFAKCG 382



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 10/236 (4%)
 Frame = -2

Query: 939 NTLIRGYSRSQFPRQGLLVYSHLLHTSS-KPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
           N +I GY  +    Q L ++S +L     KPD+ T   +L A S     L ++  GK V 
Sbjct: 301 NVMIAGYVHNHMFDQALHMFSQMLIDGKCKPDETTLVSILSACS----HLGSLEHGKWVD 356

Query: 762 AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
           + I  N F   + + N LM +++   DM++A+ +F    N  I++W T++ G A +G   
Sbjct: 357 SYIKRNNFGLSIPLGNALMDMFAKCGDMENAKTVFHNMPNRCIITWTTMVSGLAVNGECR 416

Query: 582 LARRFFDQM----PELNDISWTVMISGYVKHGELDAAQSLFDRM----PICRNIATWNSL 427
            A   F  M     + +D+ +  ++S  +  G ++  + +F RM     I   I  +  +
Sbjct: 417 EALNLFGAMCSKGVKPDDVIFIAVLSACMHGGLVEDGKRIFFRMVHKFGIEPRIEHYGCM 476

Query: 426 ISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISAYAQRGQLKLARFMFDEMPERD 262
           +    +SG L  A    + M    N + W +++++    G   L   +   + E++
Sbjct: 477 VDLLGRSGKLEEAVGFVESMHLEPNAVIWATLLASCKIHGNENLLESITKRIIEQE 532


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  260 bits (665), Expect = 8e-67
 Identities = 148/384 (38%), Positives = 221/384 (57%), Gaps = 3/384 (0%)
 Frame = -2

Query: 1146 KTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQA 967
            KT+  +N + +RL+ TG  ++     +++     S +   + +A +L   RH  G K + 
Sbjct: 25   KTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHF-GRKHR- 82

Query: 966  FSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDT 787
                  FL N +I+ +S  + PR+  ++++ +L      D F+F  +LKA S     L  
Sbjct: 83   -KQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACS----RLGL 137

Query: 786  VREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDG 607
            ++EG Q+H  +      SDVF+ N LM LY     +  A+ LFD     D VS+N++IDG
Sbjct: 138  IKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDG 197

Query: 606  YAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGE-LDAAQSLFDRMPICRNIATW 436
            Y K G +  AR  FD MP  + N ISW  MISGY +  E L  A  LF+ MP  R++ +W
Sbjct: 198  YVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPK-RDLISW 256

Query: 435  NSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVF 256
            NS+I G  K G +  A +LF++MP R+++SW +M+  YA+ G++ +AR +FDEMPERDV 
Sbjct: 257  NSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVI 316

Query: 255  SWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAY 76
            S + M++GY QN    +AL  F +ML +  + P+  TL+  L+  A L   D+G  +H Y
Sbjct: 317  SCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCY 376

Query: 75   IQRNGMRLSDNLGAALIDMYAKCG 4
            I+ NG  LS+ LG ALIDMYAKCG
Sbjct: 377  IEDNGFSLSEKLGVALIDMYAKCG 400



 Score =  112 bits (280), Expect = 4e-22
 Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 41/258 (15%)
 Frame = -2

Query: 717 NTLMSLYSAFQD-MDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQMPELND 541
           N+++S Y+  ++ +  A  LF+     D++SWN++IDG  K G +  A   F+QMP+ + 
Sbjct: 225 NSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDV 284

Query: 540 ISWTVMISGYVKHGELDAAQSLFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMPS 361
           +SW  M+ GY K GE+D A+ LFD MP  R++ + N++++G+ ++G L  A N F +M S
Sbjct: 285 VSWANMVDGYAKLGEIDIARGLFDEMPE-RDVISCNAMMAGYVQNGHLMEALNFFHDMLS 343

Query: 360 RN---------IISWNS-------------------------------MISAYAQRGQLK 301
           R          +I+ ++                               +I  YA+ G + 
Sbjct: 344 RKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSID 403

Query: 300 LARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVC 121
            A  +F+++ ++ +  W+ +I G A +  G  A +LF EM  +  V+P+++T + VL  C
Sbjct: 404 NALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEM-EKLFVKPDDITFIGVLNAC 462

Query: 120 AHLTALDQGCWIHAYIQR 67
            H   + +G      ++R
Sbjct: 463 NHAGLVKEGLMCFELMRR 480


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  259 bits (662), Expect = 2e-66
 Identities = 150/387 (38%), Positives = 222/387 (57%), Gaps = 3/387 (0%)
 Frame = -2

Query: 1155 KACKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLK 976
            + CKT   +N V AR++ TG   ++    K++  L  S N     +A +    RH   + 
Sbjct: 23   RKCKTASDINQVHARMITTGFIKNTSLTTKIILSLSSSPNVALHEFARYFFFTRHAYIIG 82

Query: 975  DQAFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVE 796
             Q       FL N +I+ +S    P+Q L+++S +L      D F+   +LKA S     
Sbjct: 83   AQ--EKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACS----R 136

Query: 795  LDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTL 616
            L  V+EG Q+H  +    F SDVF+ N L+ LY   + +D A+ +FD     D VS+N++
Sbjct: 137  LGLVKEGMQIHGLLRKLKFGSDVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSM 196

Query: 615  IDGYAKSGAIHLARRFFDQMPE--LNDISWTVMISGYVKHGE-LDAAQSLFDRMPICRNI 445
            I GY K G I LAR+ +D MP    N +SW  ++SGY++     + A +LF++MP  R++
Sbjct: 197  IAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNGFELAWNLFEKMPE-RDL 255

Query: 444  ATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPER 265
             +WNS+I G +K G +  AQ LFD MP R IISW +M+  YA+ G + +AR  FD MP+R
Sbjct: 256  ISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDNMPDR 315

Query: 264  DVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWI 85
            DV + + M+SGY QN    +AL +F +M  + N+ P+  TL+ VL+  A L  +++G  I
Sbjct: 316  DVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVEI 375

Query: 84   HAYIQRNGMRLSDNLGAALIDMYAKCG 4
            H YIQ NG  L + LG ALIDMY+KCG
Sbjct: 376  HCYIQENGFSLEEKLGVALIDMYSKCG 402


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
            gi|449480068|ref|XP_004155790.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  253 bits (646), Expect = 1e-64
 Identities = 136/385 (35%), Positives = 230/385 (59%), Gaps = 3/385 (0%)
 Frame = -2

Query: 1149 CKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQ 970
            C+T   +N V AR++ TG+  +S    K++   + S +   + +A ++   R+      +
Sbjct: 24   CETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRR 83

Query: 969  AFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELD 790
                   FL N +I+ YS    P + L+++  +L      D F+F  +LKA +     + 
Sbjct: 84   NHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACA----RVC 139

Query: 789  TVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLID 610
             V EGKQ+H  ++     S++F++N L+++Y    D++ A+ +FD     D VS+N++ID
Sbjct: 140  LVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMID 199

Query: 609  GYAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGE-LDAAQSLFDRMPICRNIAT 439
            GY KSG I LAR  FD MP  + N ISW  M+ G+ +  + +  A  LF++MP  R++ +
Sbjct: 200  GYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPE-RDLVS 258

Query: 438  WNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDV 259
            WN++I GF+K G +  A +LF+ MP R++ISW++MI  YA+ G +K+AR +FDEMP++DV
Sbjct: 259  WNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDV 318

Query: 258  FSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHA 79
             +++ +++GYAQN    +AL++F EM  Q N+ P+E TL+  L+  + L  +++   +H 
Sbjct: 319  VAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHN 378

Query: 78   YIQRNGMRLSDNLGAALIDMYAKCG 4
            Y   NG+ ++  +  ALIDMY+KCG
Sbjct: 379  YFLENGISVTGKVAVALIDMYSKCG 403



 Score = 81.6 bits (200), Expect = 7e-13
 Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
 Frame = -2

Query: 738  ESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQ 559
            E D+   NT++  ++    ++ A +LF+     D++SW+ +IDGYAK G I +AR  FD+
Sbjct: 253  ERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDE 312

Query: 558  MPELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNIATWNS----------------- 430
            MP+ + +++  +++GY ++G    A  +F  M    N++   +                 
Sbjct: 313  MPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEK 372

Query: 429  ----------------------LISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQ 316
                                  LI  +SK G +  A  +FD +  + I  WN+MIS  A+
Sbjct: 373  AASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMAR 432

Query: 315  RGQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMN 136
             G  KLA  M  EM                                   +V+P+ +T + 
Sbjct: 433  NGLGKLAFGMLLEMHRL--------------------------------SVKPDGITFIG 460

Query: 135  VLAVCAHLTALDQGCWIHAYIQRNGMRLSDNLG--AALIDMYAKCG 4
            VL  CAH   + +G  I   + R   +L   L     ++D+  K G
Sbjct: 461  VLNACAHAGLVKEGL-ICFELMRKVHKLEPKLQHYGCMVDILGKAG 505



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 10/247 (4%)
 Frame = -2

Query: 939  NTLIRGYSRSQFPRQGLLVYSHLLHTSS-KPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
            NT++ GY+++ +  + L ++  +   S+  PD+ T    L A+S    +L  V +   +H
Sbjct: 322  NTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAIS----QLGHVEKAASMH 377

Query: 762  AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
               + NG      V   L+ +YS    +++A  +FD      I  WN +I G A++G   
Sbjct: 378  NYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGK 437

Query: 582  LARRFFDQMPEL----NDISWTVMISGYVKHGELDAAQSLFDRM----PICRNIATWNSL 427
            LA     +M  L    + I++  +++     G +      F+ M     +   +  +  +
Sbjct: 438  LAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCM 497

Query: 426  ISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +    K+G +  A    +EMP   N I W +++SA        +   +   +   D    
Sbjct: 498  VDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMD---- 553

Query: 249  SCMISGY 229
            SC  S Y
Sbjct: 554  SCNSSSY 560


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  253 bits (646), Expect = 1e-64
 Identities = 147/384 (38%), Positives = 216/384 (56%), Gaps = 3/384 (0%)
 Frame = -2

Query: 1146 KTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQA 967
            KT+  +N + +RL+ TG  ++     +++     S +   + +A +L   RH  G K + 
Sbjct: 81   KTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHF-GRKHR- 138

Query: 966  FSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDT 787
                  FL N +I+ +S  + P +   +++ +L      D F+F  +LKA S     L  
Sbjct: 139  -KQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACS----RLGL 193

Query: 786  VREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDG 607
            ++EG Q+H  +      SDVF+ N LM LY     +  A+ LFD     D VS+N++IDG
Sbjct: 194  IKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDG 253

Query: 606  YAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGE-LDAAQSLFDRMPICRNIATW 436
            Y K G +  AR  FD MP  + N ISW  MISGY +  E L  A  LF+ MP  R++ +W
Sbjct: 254  YVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPK-RDLISW 312

Query: 435  NSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVF 256
            NS+I G  K G +  A +LF+ MP R+++SW +M+  YA+ G++ +AR +FDEMPERDV 
Sbjct: 313  NSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVI 372

Query: 255  SWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAY 76
            S + M++GY QN    +AL  F +ML    + P   TL+  L+  A L   D+G  +H Y
Sbjct: 373  SCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCY 432

Query: 75   IQRNGMRLSDNLGAALIDMYAKCG 4
            I+ NG  LS+ LG ALIDMYAKCG
Sbjct: 433  IEDNGFSLSEKLGXALIDMYAKCG 456


>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 658

 Score =  251 bits (642), Expect = 4e-64
 Identities = 123/300 (41%), Positives = 192/300 (64%), Gaps = 1/300 (0%)
 Frame = -2

Query: 900 RQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVHAQIVTNGFESDVFV 721
           ++ L VYS +     + + FTF FLLK    SQ     + +G+ +H +I+  GF S VFV
Sbjct: 56  KEALRVYSRMKALMVEANSFTFTFLLKCFETSQA----LEDGRVIHGEILKLGFGSSVFV 111

Query: 720 VNTLMSLYS-AFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQMPELN 544
            N+L+  Y+   +++ SA  +F+     D++SWN++I  Y   G I  A    D+MPE N
Sbjct: 112 QNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERN 171

Query: 543 DISWTVMISGYVKHGELDAAQSLFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMP 364
            ++W  ++ G  K G ++ A S+F++MP+ RN  +WNS+ISG+ + G +  AQ++F +MP
Sbjct: 172 IVTWNSVVCGLSKAGNMELAHSVFEQMPL-RNEVSWNSMISGYVRIGDVRAAQSIFYQMP 230

Query: 363 SRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKE 184
            + ++SW +MIS YA  G LK A  +F+ MP ++V SW+ MISGY  N++   AL +F  
Sbjct: 231 EKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHH 290

Query: 183 MLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAYIQRNGMRLSDNLGAALIDMYAKCG 4
           ML+ G  RP++ TL+++L+ CAHL +L+ G WI++YI++N + LS  LG ALIDM+AKCG
Sbjct: 291 MLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCG 350



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 50/236 (21%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
 Frame = -2

Query: 939 NTLIRGYSRSQFPRQGLLVYSHLL-HTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
           N +I GY  +    Q L V+ H+L +   +PD  T   +L A +     L ++  GK ++
Sbjct: 269 NAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACA----HLGSLEHGKWIN 324

Query: 762 AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
           + I  N     + + N L+ +++   D+++A+ +F       I++W T++ G A +G   
Sbjct: 325 SYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCR 384

Query: 582 LARRFFDQM----PELNDISWTVMISGYVKHGELDAAQSLFDRM----PICRNIATWNSL 427
            A   FD+M     + +D+ +  ++S     G ++  + +FD+M     I   I  +  +
Sbjct: 385 EAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCM 444

Query: 426 ISGFSKSGFLSLAQNLFDEMPSR-NIISWNSMISAYAQRGQLKLARFMFDEMPERD 262
           +    ++G L  A      M  + N + W +++      G   L + + +++ +++
Sbjct: 445 VDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQE 500


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  251 bits (640), Expect = 6e-64
 Identities = 143/384 (37%), Positives = 225/384 (58%), Gaps = 2/384 (0%)
 Frame = -2

Query: 1149 CKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQ 970
            CKT+  +N + AR++ TG  ++     K+V   V S +     +A ++   RH  G +D 
Sbjct: 21   CKTLNAVNQIHARMITTGSINNCSLSAKIVLAFVSSPHPPLAEFARYVFFSRHAFGNEDD 80

Query: 969  AFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELD 790
             F      L N +I+ YS    P+Q  +++  +L    + D F+F  +LKA       L 
Sbjct: 81   PF------LWNAVIKSYSHGCDPKQAFVMFCMMLENGVRVDKFSFSLILKACG----RLG 130

Query: 789  TVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLID 610
             V+EG Q+H  +      SD+++ N L+S Y     ++ A+ +FD  Q  D VS+N++ID
Sbjct: 131  LVKEGLQIHGLLKKMEIGSDLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMID 190

Query: 609  GYAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNIATW 436
            GY K G I LAR  FD MP  E N ++W  MISGY +  +L+ A  LF+ MP  R+  +W
Sbjct: 191  GYVKCGMIDLARELFDCMPLEEKNLVTWNSMISGYAQ-SDLEFAWELFETMPE-RDSVSW 248

Query: 435  NSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVF 256
            N++I+G+ K G +  A++LF+ MP R+I+SW ++I  Y++ G++ +AR +F+EMP+RDV 
Sbjct: 249  NTMINGYVKRGKIEDARSLFNRMPKRDIVSWANLIDGYSKLGRIHVARSLFNEMPDRDVV 308

Query: 255  SWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIHAY 76
            + + M++GY  N    + L++F+ M   G+V P+  TL+  L+  A L  +++G  +H Y
Sbjct: 309  ACNAMMAGYVGNGYFMEGLEIFRHM-QNGDVSPDVTTLLIALSAVAQLGHIEKGVALHFY 367

Query: 75   IQRNGMRLSDNLGAALIDMYAKCG 4
            IQ NG+ L   LG ALIDMYAKCG
Sbjct: 368  IQENGVPLGRKLGVALIDMYAKCG 391


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao] gi|508704332|gb|EOX96228.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative [Theobroma cacao]
          Length = 637

 Score =  251 bits (640), Expect = 6e-64
 Identities = 151/386 (39%), Positives = 221/386 (57%), Gaps = 4/386 (1%)
 Frame = -2

Query: 1149 CKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHLVELRHLSGLKDQ 970
            CKT   +N + ARL+ TG         K+V     S     + +A H+    H     +Q
Sbjct: 24   CKTWNDVNQIHARLITTGFIRSLALTTKIVLAFSPSPFCPLVDFARHVFFTHHAFRSPEQ 83

Query: 969  AFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFLLKAVSASQVELD 790
                   FL N  I+ YS  +  +Q  ++   +L    + D F+   +LKA S     L 
Sbjct: 84   EMDP---FLWNAAIKSYSHGRDAKQAFVMLCLMLENGVRFDTFSLSLVLKACS----RLG 136

Query: 789  TVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLID 610
             ++EG QVH  +    F SD+F+ N L+SLY     +  A+ LFD     D VS+N++ID
Sbjct: 137  LMKEGMQVHGLLRKLNFGSDLFLQNCLISLYIRCGFVGYARQLFDRMCRRDSVSYNSMID 196

Query: 609  GYAKSGAIHLARRFFDQMP--ELNDISWTVMISGY--VKHGELDAAQSLFDRMPICRNIA 442
            GY K+G IHLAR  F+ MP  + N I+W  MISGY  +++G + A + LF+ MP  R++ 
Sbjct: 197  GYIKTGMIHLARELFEFMPMEDKNLITWNSMISGYAQLEYGMVMALK-LFEEMPD-RDLI 254

Query: 441  TWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQLKLARFMFDEMPERD 262
            +WNS+I+GF K G +  AQ LF +MP R+++SW +MI+ YA+ G++ LAR +FDEMPERD
Sbjct: 255  SWNSMINGFVKCGNMEDAQALFVKMPKRDVVSWANMINGYAKVGKIDLARRLFDEMPERD 314

Query: 261  VFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVCAHLTALDQGCWIH 82
            V   + M+ GY QN    +AL++F  +    N++P+  TL+ VL+  A L  +D+G  IH
Sbjct: 315  VVVCNAMMGGYVQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIAQLGRIDKGLAIH 374

Query: 81   AYIQRNGMRLSDNLGAALIDMYAKCG 4
             Y++ N   LS  LG ALIDMY+KCG
Sbjct: 375  QYLEENKFSLSGRLGVALIDMYSKCG 400



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 13/250 (5%)
 Frame = -2

Query: 939  NTLIRGYSRSQFPRQGLLVYSHLL-HTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
            N ++ GY ++ +  + L ++ HL  + + +PD+ T   +L A++    +L  + +G  +H
Sbjct: 319  NAMMGGYVQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIA----QLGRIDKGLAIH 374

Query: 762  AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
              +  N F     +   L+ +YS    + +   +F+  ++  +  WN +I G A  G   
Sbjct: 375  QYLEENKFSLSGRLGVALIDMYSKCGSVKNGMLVFESIEDRSVDHWNAMIGGLAIHGLGE 434

Query: 582  LARRFFDQMPEL----NDISWTVMI-----SGYVKHGEL--DAAQSLFDRMPICRNIATW 436
            LA     +M  L    +DI++  ++     +G VK G +  D  + +   +P    +  +
Sbjct: 435  LAFSLLIEMERLSVEPDDITYIGVLNACGHAGLVKEGLICFDIMRRVHKMVP---KLKHY 491

Query: 435  NSLISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISAYAQRGQLKLARFMFDEMPERDV 259
              ++    ++G ++ A+   +EMP   N + W S++SA      + +   + + +   D 
Sbjct: 492  GCIVDILGRAGQIAEARKFIEEMPIEANDVIWRSLLSACKNHENIDVGEPVAEHLISLD- 550

Query: 258  FSWSCMISGY 229
               SC  S Y
Sbjct: 551  ---SCNSSSY 557


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550323642|gb|EEE99034.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 643

 Score =  246 bits (628), Expect = 2e-62
 Identities = 151/405 (37%), Positives = 221/405 (54%), Gaps = 11/405 (2%)
 Frame = -2

Query: 1185 SSRVXXXXXLKACKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKN--------TT 1030
            +S +     LK CK +  +N + ARLL TG   ++    K++  L FS +          
Sbjct: 13   NSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKII--LSFSTSLHAPLIEFAR 70

Query: 1029 FLLYAHHLVELRHLSGLKDQAFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKP 850
            F+ + HH  E       +++       FL N +I+ YS    P++ + + S +L   +  
Sbjct: 71   FIFFRHHAFEFDEKEEEEEK-----DPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFA 125

Query: 849  DDFTFPFLLKAVSASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSA 670
            D FT   +LKA S     +  V+EG Q+H  +    F SD+F+ N L+S Y     +  A
Sbjct: 126  DKFTLSLVLKACS----RVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRA 181

Query: 669  QNLFDLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGE 496
              +FD     D VS+N++IDGY K G I LAR  FD +P  E N ISW  +I GY +  +
Sbjct: 182  SQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSED 241

Query: 495  -LDAAQSLFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYA 319
             +  A  LF +MP  R++ +WNS+I G  K G +  AQ LFD MP+R+I+SW +MI  YA
Sbjct: 242  GILVAWQLFAKMPE-RDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYA 300

Query: 318  QRGQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLM 139
            + G++ +AR +FDEMPERDV +++ M+ GY QN    +AL +F  M   GN   +  TL+
Sbjct: 301  KNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLL 360

Query: 138  NVLAVCAHLTALDQGCWIHAYIQRNGMRLSDNLGAALIDMYAKCG 4
              L+  A L  +D+G  IH +I+  G  L   LG ALIDMY+KCG
Sbjct: 361  IALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCG 405


>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  246 bits (627), Expect = 2e-62
 Identities = 119/283 (42%), Positives = 184/283 (65%), Gaps = 1/283 (0%)
 Frame = -2

Query: 849 DDFTFPFLLKAVSASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYS-AFQDMDS 673
           + FTF FLLK    SQ     + +G+ +H +I+  GF S VFV N+L+  Y+   +++ S
Sbjct: 9   NSFTFTFLLKCFETSQA----LEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGS 64

Query: 672 AQNLFDLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGEL 493
           A  +F+     D++SWN++I  Y   G I  A    D+MPE N ++W  ++ G  K G +
Sbjct: 65  AYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNM 124

Query: 492 DAAQSLFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQR 313
           + A S+F++MP+ RN  +WNS+ISG+ + G +  AQ++F +MP + ++SW +MIS YA  
Sbjct: 125 ELAHSVFEQMPL-RNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATN 183

Query: 312 GQLKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNV 133
           G LK A  +F+ MP ++V SW+ MISGY  N++   AL +F  ML+ G  RP++ TL+++
Sbjct: 184 GDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISI 243

Query: 132 LAVCAHLTALDQGCWIHAYIQRNGMRLSDNLGAALIDMYAKCG 4
           L+ CAHL +L+ G WI++YI++N + LS  LG ALIDM+AKCG
Sbjct: 244 LSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCG 286



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
 Frame = -2

Query: 939 NTLIRGYSRSQFPRQGLLVYSHLL-HTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
           N +I GY  +    Q L V+ H+L +   +PD  T   +L A +     L ++  GK ++
Sbjct: 205 NAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACA----HLGSLEHGKWIN 260

Query: 762 AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
           + I  N     + + N L+ +++   D+++A+ +F       I++W T++ G A +G   
Sbjct: 261 SYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCR 320

Query: 582 LARRFFDQM----PELNDISWTVMISGYVKHGELDAAQSLFDRM----PICRNIATWNSL 427
            A   FD+M     + +D+ +  ++S     G ++  + +FD+M     I   I  +  +
Sbjct: 321 EAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCM 380

Query: 426 ISGFSKSGFLSLAQNLFDEMPS 361
           +    ++G L  A+ + D+ PS
Sbjct: 381 VDLLGRAGKLEEAK-IMDQEPS 401


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cicer arietinum]
          Length = 630

 Score =  244 bits (623), Expect = 6e-62
 Identities = 150/401 (37%), Positives = 214/401 (53%), Gaps = 7/401 (1%)
 Frame = -2

Query: 1185 SSRVXXXXXLKACKTVEQLNPVLARLLVTGHTHHSLSLCKLVEFLVFSKNTTFLLYAHHL 1006
            SS +     L  C T + LN + ARL+ TG    +    KL+   V S N   + +A ++
Sbjct: 14   SSTIPTLILLPKCSTKQHLNQIHARLITTGFIKSTSLTTKLILTFVSSPNKPLIEFARYI 73

Query: 1005 VELRHLSGLKDQAFSSTTTFLHNTLIRGYSRSQFPRQGLLVYSHLLHTSSKPDDFTFPFL 826
                H   + +  +     FL N +IR YS    P+  L +   ++      D +TF   
Sbjct: 74   FFKNHAFRVSNDKYEDP--FLWNAVIRSYSHGSDPKGALFLLCLMIENGFFLDKYTFSLA 131

Query: 825  LKAVSASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQ 646
            LKA S     L  +REG Q+H  +    F  DVF+ N L+ L+     +D A+ +FD   
Sbjct: 132  LKACSM----LGLMREGMQIHGLLCKTDFGCDVFLQNCLIGLFMRCGCVDFAKQVFDRIS 187

Query: 645  NLDIVSWNTLIDGYAKSGAIHLARRFFDQMP--ELNDISWTVMISGYVKHGELDA----- 487
              D VS+N++IDGY K G I  A   F  M   E N I+W  MI GY+++GE D      
Sbjct: 188  ERDSVSYNSMIDGYVKCGLIGRACELFHGMEIKEKNLITWNSMIGGYLRYGEDDDDGLRF 247

Query: 486  AQSLFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMPSRNIISWNSMISAYAQRGQ 307
            A SLF +MP  R++ +WN++I G  K G +  AQ  FD+MP R+++SW +MI  YA+ G 
Sbjct: 248  AWSLFVKMPE-RDLVSWNTMIDGCVKRGNMEDAQAFFDKMPKRDLVSWVTMIDGYAKLGD 306

Query: 306  LKLARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLA 127
            +  A  +FD MP RDV   + M++GY QN    +ALKLF +M    ++ P+  TL+ VL 
Sbjct: 307  IVAATSLFDGMPRRDVVCCNSMMAGYVQNGYCIEALKLFHDMRRATDMLPDNTTLLIVLT 366

Query: 126  VCAHLTALDQGCWIHAYIQRNGMRLSDNLGAALIDMYAKCG 4
              A L  ++ G  IH Y+  NG  LSDNLG A+IDMY+KCG
Sbjct: 367  AVAQLGRVEDGVAIHQYLIDNGYSLSDNLGVAVIDMYSKCG 407



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 48/215 (22%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
 Frame = -2

Query: 939 NTLIRGYSRSQFPRQGLLVYSHLLH-TSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
           N+++ GY ++ +  + L ++  +   T   PD+ T   +L AV+    +L  V +G  +H
Sbjct: 326 NSMMAGYVQNGYCIEALKLFHDMRRATDMLPDNTTLLIVLTAVA----QLGRVEDGVAIH 381

Query: 762 AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
             ++ NG+     +   ++ +YS    +++A ++F+      +  WN LI G A  G   
Sbjct: 382 QYLIDNGYSLSDNLGVAVIDMYSKCGSIENAISVFENIDKKCVDHWNALIGGLAVHGMSE 441

Query: 582 LARRFFDQMPEL----NDISWTVMISGYVKHGELDAAQSLFDRM----PICRNIATWNSL 427
           +A  F  +M       +DI++  ++S     G L      F+ M     +   +  +  +
Sbjct: 442 MALDFLMEMFRRCILPDDITFIAVLSACRHAGMLKEGLICFELMQKVYKLKPKLQHYGCM 501

Query: 426 ISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISA 325
           +   S++G +  A  L + MP   N + W +++SA
Sbjct: 502 VDMLSRAGHVEEATKLIENMPIEPNDVIWKTLLSA 536


>gb|AER41579.1| CRR4 [Oryza brachyantha]
          Length = 626

 Score =  244 bits (622), Expect = 8e-62
 Identities = 131/339 (38%), Positives = 211/339 (62%), Gaps = 8/339 (2%)
 Frame = -2

Query: 996  RHLSGLKDQAFSSTTTFLHNTLIRGYSRSQ----FPRQGLLVYSHLLHTSSKPDDFTFPF 829
            RH S     A  + ++  HNTLI   + ++     P   L  Y+ +L     P+ FTF F
Sbjct: 51   RHASAALRAAGPAASSVSHNTLIERLAGARGHRPVPADALAAYTAMLAAGVPPNGFTFTF 110

Query: 828  LLKAVSASQVELDTVREGKQVHAQIVTNGFESDVFVVNTLMSLYSAFQD---MDSAQNLF 658
            LL+A +     L   R  + VH QIV  GF S+VFV NTL+ +Y        + +A+ +F
Sbjct: 111  LLRACAL----LGFPRPCRCVHGQIVRWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVF 166

Query: 657  DLTQNLDIVSWNTLIDGYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQS 478
            D   + D+VSWN++I  Y  SG    A   F+ MPE N +SW  +++G+ + G++  AQ+
Sbjct: 167  DEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQT 226

Query: 477  LFDRMPICRNIATWNSLISGFSKSGFLSLAQNLFDEMPSR-NIISWNSMISAYAQRGQLK 301
            +FDRMP  RN  +WN +ISG++ SG +  A+++FD M  + +++SW +M+SAYA+ G L 
Sbjct: 227  VFDRMP-SRNAISWNLMISGYASSGDVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLD 285

Query: 300  LARFMFDEMPERDVFSWSCMISGYAQNNQGGDALKLFKEMLVQGNVRPNEVTLMNVLAVC 121
             A+ +FD MP +++ SW+ MI+GY  N++ G+AL+ F+ M+++G  RP+E TL++V++ C
Sbjct: 286  TAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSAC 345

Query: 120  AHLTALDQGCWIHAYIQRNGMRLSDNLGAALIDMYAKCG 4
            A L +++   WI ++I+++ + L+  LG ALIDM+AKCG
Sbjct: 346  AQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCG 384



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 45/254 (17%)
 Frame = -2

Query: 783 REGKQVHAQIVTNGFES-DVFVVNTLMSLYSAFQDMDSAQNLFD-LTQNLDIVSWNTLID 610
           R G  V AQ V +   S +    N ++S Y++  D+++A+++FD + Q  D+VSW  ++ 
Sbjct: 217 RVGDMVTAQTVFDRMPSRNAISWNLMISGYASSGDVEAARSMFDRMDQKKDVVSWTAMVS 276

Query: 609 GYAKSGAIHLARRFFDQMPELNDISWTVMISGYVKHGELDAAQSLFDRMPI--------- 457
            YAK G +  A+  FD MP  N +SW  MI+GY  +     A   F  M +         
Sbjct: 277 AYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEA 336

Query: 456 -----------------CR-------------NIATWNSLISGFSKSGFLSLAQNLFDEM 367
                            C               IA  N+LI  F+K G +  AQ++F EM
Sbjct: 337 TLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEM 396

Query: 366 PSRNIISWNSMISAYAQRGQLKLARFMFDEMPERDV-FSWSCMISGYAQNNQGG---DAL 199
            +R II+W +MIS +A  G  + A  +++ M    V       I+  A    GG   +  
Sbjct: 397 KTRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGW 456

Query: 198 KLFKEMLVQGNVRP 157
            +F EM+ Q N++P
Sbjct: 457 SIFNEMVEQYNIQP 470



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
 Frame = -2

Query: 939  NTLIRGYSRSQFPRQGLLVYS-HLLHTSSKPDDFTFPFLLKAVSASQVELDTVREGKQVH 763
            N +I GY+ +    + L  +   +L    +PD+ T   L+  VSA   +L +V     + 
Sbjct: 303  NAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEAT---LVSVVSAC-AQLGSVEYCNWIS 358

Query: 762  AQIVTNGFESDVFVVNTLMSLYSAFQDMDSAQNLFDLTQNLDIVSWNTLIDGYAKSGAIH 583
            + I  +     + + N L+ +++   D+  AQ++F   +   I++W T+I G+A +G   
Sbjct: 359  SFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCR 418

Query: 582  LARRFFDQM----PELNDISWTVMISGYVKHGELDAAQSLFDRMPICRNIAT----WNSL 427
             A   ++ M     EL+D+ +   ++  V  G L    S+F+ M    NI      +  +
Sbjct: 419  EALLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCV 478

Query: 426  ISGFSKSGFLSLAQNLFDEMP-SRNIISWNSMISAYAQRGQLKLARFMFDEMPERDVFSW 250
            +    ++G L  A    + MP   +++ W +++S+    G  +   ++  ++ E + F+ 
Sbjct: 479  VDLLGRAGNLQEAVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYVSKKITELEPFNS 538

Query: 249  SCMI 238
            S  +
Sbjct: 539  SYQV 542