BLASTX nr result
ID: Sinomenium22_contig00027806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00027806
(421 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_358607.1| hypothetical protein PhapfoPp060 [Phalaenopsis ... 74 2e-11
ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) ... 73 4e-11
gb|AHI87554.1| photosystem II P680 chlorophyll A apoprotein (chl... 73 4e-11
emb|CAA32264.1| chlorophyll a-binding protein [Hordeum vulgare s... 73 4e-11
ref|YP_008994099.1| PSII 47 kDa protein (chloroplast) [Fritillar... 73 4e-11
ref|YP_008993804.1| photosystem II CP47 chlorophyll apoprotein (... 73 4e-11
ref|YP_008993632.1| photosystem II CP47 chlorophyll apoprotein (... 73 4e-11
ref|YP_008993374.1| photosystem II CP47 chlorophyll apoprotein (... 73 4e-11
ref|YP_008815776.1| photosystem II 47 kDa protein [Setaria itali... 73 4e-11
gb|AGQ55783.1| photosystem II CP47 chlorophyll apoprotein (chlor... 73 4e-11
gb|AGQ55700.1| photosystem II CP47 chlorophyll apoprotein (chlor... 73 4e-11
ref|YP_008578311.1| photosystem II p680 chlorophyll A apoprotein... 73 4e-11
ref|YP_008378809.1| photosystem II 47 kDa protein (chloroplast) ... 73 4e-11
ref|XP_004987317.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 73 4e-11
ref|YP_008080521.1| photosystem II protein B (chloroplast) [Phar... 73 4e-11
ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein... 73 4e-11
ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein... 73 4e-11
ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein... 73 4e-11
ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein... 73 4e-11
emb|CCQ48580.1| photosystem II CP47 chlorophyll apoprotein, part... 73 4e-11
>ref|YP_358607.1| hypothetical protein PhapfoPp060 [Phalaenopsis aphrodite subsp.
formosana] gi|58802842|gb|AAW82562.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 81
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1
Query: 1 EGSKTANLYRAIEPAQPDTRAVCIIWTESNRPRSFNT 111
EGSKTAN YRAIEPAQP+TRAVCIIWTESNRP SFNT
Sbjct: 43 EGSKTANSYRAIEPAQPETRAVCIIWTESNRPGSFNT 79
>ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) [Dendrobium officinale]
gi|507474345|gb|AGM48221.1| photosystem II 47 kDa
protein (chloroplast) [Dendrobium officinale]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>gb|AHI87554.1| photosystem II P680 chlorophyll A apoprotein (chloroplast)
[Chionographis japonica]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>emb|CAA32264.1| chlorophyll a-binding protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008994099.1| PSII 47 kDa protein (chloroplast) [Fritillaria taipaiensis]
gi|474452219|gb|AGI51271.1| PSII 47 kDa protein
(chloroplast) [Fritillaria taipaiensis]
gi|500050369|gb|AGL80032.1| PSII 47 kDa protein
(chloroplast) [Fritillaria taipaiensis]
gi|500050459|gb|AGL80117.1| PSII 47 kDa protein
(chloroplast) [Fritillaria taipaiensis]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008993804.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Magnolia
sinica]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008993632.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Magnolia
odora]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008993374.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Magnolia
pyramidata]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008815776.1| photosystem II 47 kDa protein [Setaria italica]
gi|555298068|gb|AGZ13170.1| photosystem II 47 kDa
protein [Setaria italica] gi|605059484|gb|AHV90350.1|
photosystem II CP47 chlorophyll apoprotein (chloroplast)
[Setaria italica]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>gb|AGQ55783.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Lilium
longiflorum]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>gb|AGQ55700.1| photosystem II CP47 chlorophyll apoprotein (chloroplast)
[Alstroemeria aurea]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008578311.1| photosystem II p680 chlorophyll A apoprotein (CP-47) (chloroplast)
[Cocos nucifera] gi|528748801|gb|AGS43491.1| photosystem
II p680 chlorophyll A apoprotein (CP-47) (chloroplast)
[Cocos nucifera]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008378809.1| photosystem II 47 kDa protein (chloroplast) [Najas flexilis]
gi|427920094|gb|AFY64125.1| photosystem II 47 kDa
protein (chloroplast) [Najas flexilis]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|XP_004987317.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II CP47 chlorophyll
apoprotein-like [Setaria italica]
Length = 377
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008080521.1| photosystem II protein B (chloroplast) [Pharus latifolius]
gi|570700338|ref|YP_008993999.1| photosystem II 47 kDa
protein (chloroplast) [Pharus lappulaceus]
gi|336280820|gb|AEI29108.1| photosystem II protein B
(chloroplast) [Pharus latifolius]
gi|449020282|gb|AGE65779.1| photosystem II 47 kDa
protein (chloroplast) [Pharus lappulaceus]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium mannii] gi|482662572|gb|AGK25794.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium mannii]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium tracyanum] gi|482662414|gb|AGK25638.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tracyanum]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium sinense] gi|512721409|ref|YP_008081754.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tortisepalum]
gi|482662098|gb|AGK25326.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
sinense] gi|482662177|gb|AGK25404.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662256|gb|AGK25482.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662335|gb|AGK25560.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
mannii] gi|482662493|gb|AGK25716.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium aloifolium] gi|482662019|gb|AGK25248.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium aloifolium]
Length = 508
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 9 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 47
>emb|CCQ48580.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Dicentra eximia]
Length = 447
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 119 YNIVLNDLGRLLSVHIMHTALVSGWAGSMALYKLAVFDP 3
+ +VLND GRLLSVHIMHTALVSGWAGSMALY+LAVFDP
Sbjct: 2 HTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDP 40