BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00027765
         (255 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prun...   114   2e-23
ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Caps...   113   3e-23
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   113   3e-23
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   112   4e-23
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   112   4e-23
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        112   4e-23
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   112   4e-23
ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phas...   112   5e-23
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   112   7e-23
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   111   9e-23
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   111   9e-23
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              111   9e-23
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   111   1e-22
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   111   1e-22
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit...   110   2e-22
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   110   2e-22
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   110   2e-22
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   110   2e-22
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   110   3e-22
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   109   3e-22

>ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
           gi|462405724|gb|EMJ11188.1| hypothetical protein
           PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  114 bits (284), Expect = 2e-23
 Identities = 59/75 (78%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEG-PVKNSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL +L +     + +V+SK D+LRFVA MP
Sbjct: 397 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLHPAVSSKPDILRFVASMP 456

Query: 76  SHMKISWNLMSSYLV 32
           SHMKISWNLMSSYLV
Sbjct: 457 SHMKISWNLMSSYLV 471


>ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Capsella rubella]
           gi|482569081|gb|EOA33269.1| hypothetical protein
           CARUB_v10022381mg [Capsella rubella]
          Length = 478

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/76 (75%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL VL +   +   + +  K D+LRFVA M
Sbjct: 403 GLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQEAEPIRTGIIDKPDLLRFVASM 462

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWNLMSSYLV
Sbjct: 463 PSHMKISWNLMSSYLV 478


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/76 (75%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL VL +   +   + +  K D+LRFVA M
Sbjct: 402 GLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQETEPLRTGIIDKPDLLRFVASM 461

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWNLMSSYLV
Sbjct: 462 PSHMKISWNLMSSYLV 477


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
           gi|557086377|gb|ESQ27229.1| hypothetical protein
           EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/76 (73%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLD+QKGSVLSKVPLLHLHCRE+VLPNIAKFL VL    +   +  + SK D+LRFVA M
Sbjct: 403 GLDIQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNNQEIDSLHPGIISKPDLLRFVASM 462

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWN+MSSYLV
Sbjct: 463 PSHMKISWNIMSSYLV 478


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/76 (73%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL V+ +   +  ++ +  K D+LRFVA M
Sbjct: 416 GLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASM 475

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWNLMSSYLV
Sbjct: 476 PSHMKISWNLMSSYLV 491


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/76 (73%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL V+ +   +  ++ +  K D+LRFVA M
Sbjct: 251 GLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASM 310

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWNLMSSYLV
Sbjct: 311 PSHMKISWNLMSSYLV 326


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/76 (73%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NSSVASKRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL V+ +   +  ++ +  K D+LRFVA M
Sbjct: 403 GLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASM 462

Query: 79  PSHMKISWNLMSSYLV 32
           PSHMKISWNLMSSYLV
Sbjct: 463 PSHMKISWNLMSSYLV 478


>ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
           gi|561034434|gb|ESW32964.1| hypothetical protein
           PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/75 (77%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL VL     + +SS+  + +VLRFVA MP
Sbjct: 406 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVLNNSSEELHSSLNQQPEVLRFVATMP 465

Query: 76  SHMKISWNLMSSYLV 32
           SHM+ISWNLMSSYLV
Sbjct: 466 SHMRISWNLMSSYLV 480


>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
           lycopersicum]
          Length = 475

 Score =  112 bits (279), Expect = 7e-23
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSVASKRDVLRFVAPMPS 74
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+E+      KN+  +SK D+LRFVAPMPS
Sbjct: 402 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTRKNTDYSSKPDLLRFVAPMPS 461

Query: 73  HMKISWNLMSSYLV 32
            MKISW LMSS L+
Sbjct: 462 PMKISWKLMSSCLI 475


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSVASKRDVLRFVAPMPS 74
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+E+      K+S  +SK D+LRFVAPMPS
Sbjct: 402 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTKKHSDYSSKPDLLRFVAPMPS 461

Query: 73  HMKISWNLMSSYLV 32
            MKISW LMSS L+
Sbjct: 462 PMKISWKLMSSCLI 475


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/77 (72%), Positives = 63/77 (81%), Gaps = 3/77 (3%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNS---SVASKRDVLRFVAP 83
           GLDVQKGSVLSKVPLLHLHCREL+LPNIAKFL +L   P   +    ++ K D+LRFVA 
Sbjct: 403 GLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVAS 462

Query: 82  MPSHMKISWNLMSSYLV 32
           MP+HMKISWNLMSSYLV
Sbjct: 463 MPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/77 (72%), Positives = 63/77 (81%), Gaps = 3/77 (3%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNS---SVASKRDVLRFVAP 83
           GLDVQKGSVLSKVPLLHLHCREL+LPNIAKFL +L   P   +    ++ K D+LRFVA 
Sbjct: 405 GLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVAS 464

Query: 82  MPSHMKISWNLMSSYLV 32
           MP+HMKISWNLMSSYLV
Sbjct: 465 MPNHMKISWNLMSSYLV 481


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  111 bits (277), Expect = 1e-22
 Identities = 61/76 (80%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVL-GEGPVKNSSVAS-KRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL V  G+GP  N  V+S   D+LRFVA M
Sbjct: 398 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGP--NRPVSSFDSDLLRFVARM 455

Query: 79  PSHMKISWNLMSSYLV 32
           PSHM+ISWNLMSSYLV
Sbjct: 456 PSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  111 bits (277), Expect = 1e-22
 Identities = 61/76 (80%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVL-GEGPVKNSSVAS-KRDVLRFVAPM 80
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL V  G+GP  N  V+S   D+LRFVA M
Sbjct: 398 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGP--NRPVSSFDSDLLRFVARM 455

Query: 79  PSHMKISWNLMSSYLV 32
           PSHM+ISWNLMSSYLV
Sbjct: 456 PSHMRISWNLMSSYLV 471


>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 449

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/75 (74%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRELVLPNI KF+ VL     +  +S+  + DVLRFVA MP
Sbjct: 375 GLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMP 434

Query: 76  SHMKISWNLMSSYLV 32
           SHM+ISWNLMSSYLV
Sbjct: 435 SHMRISWNLMSSYLV 449


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 476

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/75 (74%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRELVLPNI KF+ VL     +  +S+  + DVLRFVA MP
Sbjct: 402 GLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMP 461

Query: 76  SHMKISWNLMSSYLV 32
           SHM+ISWNLMSSYLV
Sbjct: 462 SHMRISWNLMSSYLV 476


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
           gi|550341843|gb|ERP62872.1| hypothetical protein
           POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  110 bits (275), Expect = 2e-22
 Identities = 54/75 (72%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVL-GEGPVKNSSVASKRDVLRFVAPMP 77
           G+D+QKGSVL+KVPLLHLHCRELVLPNIAKFL+VL G+    + +++++ D+LRFVA MP
Sbjct: 388 GVDIQKGSVLAKVPLLHLHCRELVLPNIAKFLDVLDGKSENVHPALSTRPDLLRFVASMP 447

Query: 76  SHMKISWNLMSSYLV 32
           SHMKISWNLMSS+LV
Sbjct: 448 SHMKISWNLMSSFLV 462


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  110 bits (275), Expect = 2e-22
 Identities = 57/75 (76%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRE VLPNIAKFL VL E     + ++ +K D+LRFVA MP
Sbjct: 394 GLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMP 453

Query: 76  SHMKISWNLMSSYLV 32
           +HMKISWNLMSSYLV
Sbjct: 454 THMKISWNLMSSYLV 468


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508779021|gb|EOY26277.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 471

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEG-PVKNSSVASKRDVLRFVAPMP 77
           GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL VL +       +++ K D+LRFVA MP
Sbjct: 397 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNKNTETLPPALSMKPDLLRFVATMP 456

Query: 76  SHMKISWNLMSSYLV 32
            HMKISWNLMSSYLV
Sbjct: 457 KHMKISWNLMSSYLV 471


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 469

 Score =  109 bits (273), Expect = 3e-22
 Identities = 58/75 (77%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
 Frame = -3

Query: 253 GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSV-ASKRDVLRFVAPMP 77
           GLDVQKGSV+SKVPLLHLHCRELVLPNIAKFL +L +      +V +SK DVLRFVA MP
Sbjct: 395 GLDVQKGSVVSKVPLLHLHCRELVLPNIAKFLCLLDQKLDNRYTVDSSKPDVLRFVASMP 454

Query: 76  SHMKISWNLMSSYLV 32
           +HMKISWNLMSSYLV
Sbjct: 455 THMKISWNLMSSYLV 469