BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00027709
         (1360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   548   e-153
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]     533   e-149
ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prun...   530   e-148
ref|XP_002308333.2| pentatricopeptide repeat-containing family p...   520   e-145
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat...   518   e-144
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat...   516   e-143
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   510   e-142
ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily p...   510   e-142
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat...   502   e-139
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr...   500   e-139
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   498   e-138
ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [A...   494   e-137
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat...   494   e-137
ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phas...   489   e-136
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat...   472   e-130
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat...   463   e-128
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr...   460   e-127
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ...   455   e-125
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps...   452   e-124
ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat...   452   e-124

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  548 bits (1411), Expect = e-153
 Identities = 270/432 (62%), Positives = 326/432 (75%)
 Frame = +1

Query: 4    RADVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQC 183
            R D+  ++ +PK YNE DLQ IC+IL +SMDW  ++EAL KCTV FT +L +E+LR+C  
Sbjct: 616  RMDLHLVEHLPKTYNEQDLQEICRILSTSMDWCLIEEALEKCTVQFTSQLVVEILRSCSL 675

Query: 184  HGHAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETW 363
            HGHAAL FFSWV +R GY +TTETYNM IKISGC+K+F  MR L+ EM+RK   +T +TW
Sbjct: 676  HGHAALLFFSWVGKRDGYSHTTETYNMGIKISGCSKNFRSMRNLFFEMRRKGHPVTPDTW 735

Query: 364  SIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEM 543
            +IMIMQYGRAGLTEIAL  F EMKA  CKP+GSTYKYL++ LCGRKGRK+DEAI+ F EM
Sbjct: 736  TIMIMQYGRAGLTEIALRNFAEMKANDCKPNGSTYKYLIICLCGRKGRKVDEAIKTFLEM 795

Query: 544  INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXX 723
            I AG+VPDKEL E YL+ LCE  K  DARRC ++L K GFT PLSYSL I          
Sbjct: 796  IRAGYVPDKELVESYLKCLCEVGKLLDARRCTEALCKLGFTIPLSYSLYIRALCRAGRLE 855

Query: 724  XXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFI 903
                        R TLDQYI+GSLVH             KVD+MKQ G++PTVHVYTS I
Sbjct: 856  EALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYTSLI 915

Query: 904  VHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPS 1083
            VHFFKEKQ+ KAL+TF+KM+EEGCEPTIVTYS+LIRG+M MG F DA N+F  ++LKGP 
Sbjct: 916  VHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGHMAMGNFVDARNVFGLLQLKGPF 975

Query: 1084 PDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTV 1263
            PDFKTYSMFI  LCK G+SEE+L+L+ EM+D+GI+PST+NFRTV  GLNREGK  LA+ V
Sbjct: 976  PDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIPSTINFRTVMFGLNREGKHSLANIV 1035

Query: 1264 LQRKWSLRSKRR 1299
            LQ+K +L+SKR+
Sbjct: 1036 LQKKLALKSKRK 1047



 Score =  172 bits (437), Expect = 2e-40
 Identities = 112/439 (25%), Positives = 196/439 (44%), Gaps = 35/439 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I KI+ + +   +M+E L K   +F  E+  +VL+ C    H ALRFF+WV  R G 
Sbjct: 142  VDEITKIVRADIGTGSMEEKLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVKFRNGG 201

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT TYN  + I+G AK+F  + KL  EM+ K      +TW+I+I  YG+A L   AL 
Sbjct: 202  CHTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALL 261

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEM------------------ 543
              ++M   GC+P  + Y  L+  LC    +K D A+  + EM                  
Sbjct: 262  ILEKMWKSGCEPDVAAYMILIRSLCN--AQKADIALEFYKEMVQKEMGLDMSLYELLLTC 319

Query: 544  -----------------INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTP 672
                             I    +P++++    L+S C   +  +A   I+ L+    T  
Sbjct: 320  LAGSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLE 379

Query: 673  LSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDA 852
             +    +                      R  +D  ++G ++               +  
Sbjct: 380  PNDFETLVKGLCRADRITDAAEIVDIMKKRKVVDAKVYGIIISGYLRRNDIPKAFDVLQT 439

Query: 853  MKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGM 1032
            M + G  PT+  YT  + H F+  + +K    + +M E G EP  V  ++++ G++    
Sbjct: 440  MTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHVRQNH 499

Query: 1033 FSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRT 1212
              +AW +F+ M+ +G    +K+YS+FI  LCK  R++E +++++EM  + I+     F  
Sbjct: 500  IFEAWKVFNSMQERGIRATWKSYSVFIKELCKISRTDEVIKVLNEMQASKIIIGDEVFNW 559

Query: 1213 VFHGLNREGKQDLAHTVLQ 1269
            V   L ++G+ ++   V+Q
Sbjct: 560  VISYLEKKGETEMVKKVMQ 578


>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
          Length = 1039

 Score =  533 bits (1372), Expect = e-149
 Identities = 256/426 (60%), Positives = 318/426 (74%)
 Frame = +1

Query: 22   MQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAAL 201
            ++ +PK YNE DLQ IC+IL  S DW  +QEAL KCTV FTPEL +EVLRNC  +G+ A 
Sbjct: 611  LEPLPKAYNERDLQEICRILSLSRDWFLIQEALEKCTVEFTPELVVEVLRNCNTNGYPAF 670

Query: 202  RFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQ 381
            +FFSWV ++  Y +T ETYN AIK++G  KDF+HMR L++EM+RK   ITS+TW+IMIM 
Sbjct: 671  QFFSWVGKQTDYSHTVETYNTAIKLAGRGKDFKHMRNLFYEMRRKGHSITSDTWTIMIML 730

Query: 382  YGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHV 561
            YGR GLTEIALN F EMKA  C PS STYKYL+V LCG+KGRK+DEAIR+F EMI+AGH+
Sbjct: 731  YGRTGLTEIALNTFGEMKANNCNPSASTYKYLIVSLCGKKGRKVDEAIRLFQEMISAGHI 790

Query: 562  PDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXX 741
            PDKEL E YL  +CE  K SDAR+C+ SL K GFT PLS+SL +                
Sbjct: 791  PDKELIETYLACVCEVDKLSDARKCVDSLQKLGFTVPLSHSLYVRSLCRAGRLEEALALA 850

Query: 742  XXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKE 921
                  ++TLDQ  +GS+ H             K+D+MK  G+NPTVHVYTS IVHF KE
Sbjct: 851  DEIGEEKTTLDQSTYGSIFHGLLRKGRVEEALAKMDSMKATGINPTVHVYTSLIVHFLKE 910

Query: 922  KQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTY 1101
            KQI+KAL+T +KMREEGCEPTIVTYS+ I+GY++MG   +AWN+F+ MK+KGP PDF+TY
Sbjct: 911  KQIQKALETLQKMREEGCEPTIVTYSAFIKGYVNMGNIGEAWNVFYLMKVKGPLPDFRTY 970

Query: 1102 SMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWS 1281
            SMFI  LC  G+SEE++RLIDEM+++GI+PSTVNFRTVFHGLNREGKQ LA +V+Q+K +
Sbjct: 971  SMFISCLCNVGKSEEAVRLIDEMLNSGIVPSTVNFRTVFHGLNREGKQSLARSVMQKKLA 1030

Query: 1282 LRSKRR 1299
            L  KR+
Sbjct: 1031 LIRKRK 1036



 Score =  154 bits (388), Expect = 1e-34
 Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 33/437 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  + +I+ +     +M+E L K       E+  +VL+ C    H A+RFF+WV  R  +
Sbjct: 133  VHEVARIVRAEFGSVSMEERLEKSGFELDSEIVDKVLKRCFKVPHLAMRFFNWVKLRDWF 192

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
              TT  YN  + I+G AK+F  M KL  EM++       +TW+I+I  YG+A L   AL 
Sbjct: 193  DPTTRVYNTMLYIAGEAKEFRLMEKLEEEMEKASCEKDVKTWTILISSYGKAKLIGKALL 252

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCG---------------RKGRKIDEAIR-------- 528
             +++M   G +P    Y+ ++  LC                RK  ++D ++         
Sbjct: 253  IYEKMIKSGREPDAVVYRMMIRSLCAAGKADIAMEFYTEMARKDIRLDLSLYKMLLSCIA 312

Query: 529  ----------IFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLS 678
                      +  +M+    + D  +    ++S C + +  DA   I+ L     T    
Sbjct: 313  RSGDSAGVHLVADDMVKVSQILDHIVYGCVVKSFCISGRIRDALEFIRDLKDKDVTFGYE 372

Query: 679  YSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMK 858
            Y   +                      R  +D  ++G +++                +MK
Sbjct: 373  YFETLVKGLCRADRIVDALEIFEIMKRRQLVDGNVYGIIINGYLRRNDTSKALDLFQSMK 432

Query: 859  QGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFS 1038
            + G  P    YT  + H F+ KQ EK  + + +M E G E   V  ++++ G++     S
Sbjct: 433  EVGHCPKASTYTELMQHLFRLKQYEKGCELYNEMLERGVERDSVAITAMVAGHVRANRVS 492

Query: 1039 DAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVF 1218
            +AW +F  M+ KG  P +K YS+F+  LC+   ++E L++++EM  + IL        V 
Sbjct: 493  EAWKVFRSMEDKGVWPTWKAYSIFVKELCRISNTDEILKVLNEMRASEILIGDEVIHWVI 552

Query: 1219 HGLNREGKQDLAHTVLQ 1269
              L ++G+ +    V Q
Sbjct: 553  SHLEKKGEIENVEKVKQ 569


>ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
            gi|462400024|gb|EMJ05692.1| hypothetical protein
            PRUPE_ppa019635mg [Prunus persica]
          Length = 893

 Score =  530 bits (1365), Expect = e-148
 Identities = 264/428 (61%), Positives = 316/428 (73%)
 Frame = +1

Query: 16   PSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHA 195
            P ++ + K Y+E DLQ IC+IL SS  W ++QEAL   +V FTP L LE+LR+   HG  
Sbjct: 464  PLLEPLSKAYDEQDLQKICRILSSSTAWCSIQEALENSSVDFTPGLVLEILRSSSMHGLV 523

Query: 196  ALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMI 375
            AL+FF+WV ++ GY  TTETYNMAIKI+G  KDF+HMR L++EM+RK   IT++TW+IMI
Sbjct: 524  ALQFFAWVGKQTGYNQTTETYNMAIKIAGRGKDFKHMRSLFYEMRRKGFSITADTWTIMI 583

Query: 376  MQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAG 555
            MQYGR GLTEIAL  F+EMK+    P+GSTYKYL++ LCGRKGRK DEAIRIF EMI A 
Sbjct: 584  MQYGRTGLTEIALQIFEEMKSNNYSPTGSTYKYLIISLCGRKGRKADEAIRIFQEMIRAN 643

Query: 556  HVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXX 735
            HVPDKEL E YL  LCE  + SDARRCI  LSK GFT PL YSL I              
Sbjct: 644  HVPDKELVESYLGCLCEVGELSDARRCIDLLSKAGFTIPLGYSLYIRALCRAGRLQEAAA 703

Query: 736  XXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFF 915
                    RS LDQY +GSLVH             KVD+MKQ G+NPTVHVYTS IVHFF
Sbjct: 704  LMDDVREDRSKLDQYTYGSLVHGLLRSGQLEAALAKVDSMKQAGINPTVHVYTSLIVHFF 763

Query: 916  KEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFK 1095
            KEKQI KAL+ FK+M++EGCEPTIVTYS+LIRGYM+M MF++AW +FH+MK KGP PDF+
Sbjct: 764  KEKQIGKALEIFKEMQQEGCEPTIVTYSALIRGYMNMEMFAEAWEVFHKMKQKGPLPDFR 823

Query: 1096 TYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRK 1275
            TYSMFI  LCK G+SEE++ LI EM++TGI+PS VNFRTVF+GLNREGKQDLA  V+Q+K
Sbjct: 824  TYSMFISCLCKVGKSEEAIPLIPEMLNTGIVPSVVNFRTVFYGLNREGKQDLARNVMQQK 883

Query: 1276 WSLRSKRR 1299
             SL  KR+
Sbjct: 884  LSLIRKRK 891



 Score =  169 bits (428), Expect = 3e-39
 Identities = 111/431 (25%), Positives = 192/431 (44%), Gaps = 37/431 (8%)
 Frame = +1

Query: 106  MQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNTTETYNMAIKISGC 285
            M+E L         E+  +VL+ C    H ALRFF+WV  + G+++TTETYN  + I+G 
Sbjct: 1    MEELLENMGFQLDSEIVDKVLKRCFKVPHLALRFFNWVKLKEGFRHTTETYNTMLFIAGE 60

Query: 286  AKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGST 465
            AK+F  + KL  EM++       +TW+I+I QYG+A L   AL  ++EM+  G +P    
Sbjct: 61   AKEFAMVEKLVDEMEKNSCQKDVKTWTILISQYGKAKLIGKALLVYEEMRKCGYEPDAVV 120

Query: 466  YKYLVVFLCGRKGRKIDEAIRIFHEM---------------------------------- 543
            Y+ ++  LC     K D A+  + EM                                  
Sbjct: 121  YRLMIRALCA--AGKSDVAMEFYKEMVKKDIGLDTNLYKLLLNGIARSGETGAVALVSDD 178

Query: 544  -INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXX 720
             I    +P+  +    L+  C + +  +A   I+ L          Y   +         
Sbjct: 179  MIRVSQIPEHIVYGSVLKCFCISGRIKEALEFIRELKNKEVILGPEYFETLVKGLCRADR 238

Query: 721  XXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSF 900
                         R+ LD  ++G +++                +MK+ G  P    YT  
Sbjct: 239  IVDALEILDIMKRRNILDGKVYGIIINGYLRINEVSKALDLFHSMKESGYFPMTSTYTEL 298

Query: 901  IVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGP 1080
            + H FK  + +K  + +++M E G EP  V  ++++ G++     S+AW +F++MK KG 
Sbjct: 299  MQHLFKLNEYQKGCELYEEMLESGVEPDSVAITAVVAGHVRQNHISEAWKVFNKMKEKGI 358

Query: 1081 SPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHT 1260
             P  K+YS+FI  LC+  R++E L+++ +M  + I+     F    H + ++G+ +    
Sbjct: 359  EPTVKSYSVFIKELCRISRTDEILKVLYDMQASSIVIRDDIFNLAIHHMEKKGETENLEK 418

Query: 1261 V--LQRKWSLR 1287
            V  +QR + L+
Sbjct: 419  VKQMQRNYKLQ 429


>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336797|gb|EEE91856.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 1048

 Score =  520 bits (1340), Expect = e-145
 Identities = 253/432 (58%), Positives = 312/432 (72%)
 Frame = +1

Query: 4    RADVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQC 183
            R D  S++ + K Y+E DLQ + +IL S  DW  +Q+AL KCT+ FTPEL  E LRNC  
Sbjct: 615  RVDWNSVKPLSKAYDEQDLQEVLRILSSLEDWPIIQDALEKCTIQFTPELVAETLRNCGM 674

Query: 184  HGHAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETW 363
            HG+AAL FF+WV ++ G+  TTETYNMA+K+SG  KDF+HMR L++EM+R+  +I  +TW
Sbjct: 675  HGNAALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTW 734

Query: 364  SIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEM 543
            +IMIMQYGR GLTEIAL  F EMKA GC P+ STYKYL++FLCGRKGRK+DEAI+IF EM
Sbjct: 735  AIMIMQYGRTGLTEIALKIFGEMKASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREM 794

Query: 544  INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXX 723
            I AGHVPDKEL   YL  LCE  K  +AR+ + SL K GFT P SYSL I          
Sbjct: 795  IRAGHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPASYSLYIRALCRAGMLE 854

Query: 724  XXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFI 903
                        ++TLD+Y   SLVH             KVD+MKQ G+NPTVHVYTS I
Sbjct: 855  EALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLI 914

Query: 904  VHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPS 1083
            VHFF+EK   KAL+ F+ M++EGCEPTIVTYS+LIRGYMD     +AWN+FH +K KGP+
Sbjct: 915  VHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPA 974

Query: 1084 PDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTV 1263
            PDFKTYSMF+  LC+ G+SEE+L+L+ +M+D GI+PS VNFRTVF GLNREGKQ LA TV
Sbjct: 975  PDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTV 1034

Query: 1264 LQRKWSLRSKRR 1299
            LQ+KW+L SKR+
Sbjct: 1035 LQKKWALTSKRK 1046



 Score =  155 bits (392), Expect = 4e-35
 Identities = 101/422 (23%), Positives = 180/422 (42%), Gaps = 33/422 (7%)
 Frame = +1

Query: 103  TMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNTTETYNMAIKISG 282
            +M+E L K      PE+  +VL+ C    H A RFF+WV  + G+ +TT+TYN  +  +G
Sbjct: 156  SMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAG 215

Query: 283  CAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGS 462
             A++F  +  L  EM++       +TW+I+I QYG+A L   AL   ++M+  GC+P   
Sbjct: 216  EAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVE 275

Query: 463  TYK---------------------------------YLVVFLCGRKGRKIDEAIRIFHEM 543
             Y+                                 Y ++  C  K   +     +  +M
Sbjct: 276  VYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDM 335

Query: 544  INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXX 723
            I    +P+ ++    L+S C   +  +A   I+ L           S  +          
Sbjct: 336  IRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRI 395

Query: 724  XXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFI 903
                        +  +D  ++G +++                +MK+ G  PT   YT  +
Sbjct: 396  ADALEIVEIMKRKDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELM 455

Query: 904  VHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPS 1083
             H F+  + +K  + + +M E G E   V   +++ G++     S+AW +F  M+ KG  
Sbjct: 456  QHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIK 515

Query: 1084 PDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTV 1263
            P +K+YS+FI  LCK  R++E ++++ +M  + +      F  V   + R+G+ D    V
Sbjct: 516  PTWKSYSIFIKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKV 575

Query: 1264 LQ 1269
             Q
Sbjct: 576  KQ 577


>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
            subsp. vesca]
          Length = 1038

 Score =  518 bits (1334), Expect = e-144
 Identities = 251/419 (59%), Positives = 313/419 (74%)
 Frame = +1

Query: 43   YNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVD 222
            Y++ DLQ ICKIL SS DW  +QEAL K  V+FTP L L +L++   HG  AL+FFSW+ 
Sbjct: 618  YDDKDLQEICKILSSSTDWYLVQEALEKSAVVFTPGLVLSILKSHSAHGLVALQFFSWIG 677

Query: 223  QRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLT 402
            ++ GY++TT+TYNMAIKI+G  KDF+HMR L +EM+R R  IT +TW+IMIMQYGR GLT
Sbjct: 678  KQSGYRHTTDTYNMAIKIAGRGKDFKHMRNLLYEMRRNRFPITQDTWTIMIMQYGRTGLT 737

Query: 403  EIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAE 582
            EIAL  F+EMK+  C P+GSTYKYL++ LCGRKGRK+DEAI+ F EMI A H+PDKEL E
Sbjct: 738  EIALQLFREMKSN-CNPTGSTYKYLIISLCGRKGRKVDEAIKTFQEMIRAAHIPDKELVE 796

Query: 583  IYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXR 762
             Y+  LCE  K SDARRCI SLSK GFTT LSYSL I                      R
Sbjct: 797  TYIGCLCEVDKLSDARRCIDSLSKVGFTTSLSYSLYIRALCRAGRLQEASEMMDDIGEER 856

Query: 763  STLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKAL 942
            STLD+Y +GS VH             K+++MKQ G+ PTVHVYTS IVHF KEKQI++AL
Sbjct: 857  STLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIVHFLKEKQIKRAL 916

Query: 943  DTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSL 1122
            + F +M++EGCEPT+VTYS+LIRGYM+M M ++AW++FH MKLKGPSPDFKTYSMF+  L
Sbjct: 917  EIFNEMQQEGCEPTVVTYSTLIRGYMNMEMTAEAWSVFHNMKLKGPSPDFKTYSMFLHCL 976

Query: 1123 CKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKRR 1299
            CK G+SEE+++LI EM+++GI+PS VNFRTVF+GLNREGK DLA TV+++K S   KR+
Sbjct: 977  CKAGKSEEAMQLITEMLNSGIIPSVVNFRTVFYGLNREGKHDLARTVMEQKSSSIRKRK 1035



 Score =  159 bits (403), Expect = 2e-36
 Identities = 108/442 (24%), Positives = 184/442 (41%), Gaps = 36/442 (8%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  + +I+ +     +M+E L +       E+   VL+ C    H ALRFF WV  R G+
Sbjct: 136  VHEVTRIVRAESGLVSMEERLDELRFELDSEIVDNVLKRCFKVPHLALRFFDWVKMREGF 195

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT+ YN  + I+G  K+F  + KL  EM+R       +TW+I+I  YG+A L   AL 
Sbjct: 196  CHTTKIYNTVLCIAGDVKEFGMVEKLVEEMERNSCKKDVKTWTILIQMYGKAKLVGRALL 255

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEM------------------ 543
             +++MK  G +P    ++ ++  LC     K D A+  + EM                  
Sbjct: 256  VYEKMKKFGFEPDAVVFRIMITALCA--AGKADVAMEFYKEMVQKDIGLDIKMYKLLLNS 313

Query: 544  ------------------INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTT 669
                              I    +P+  +    L+S C + +  +A   I+ L    F  
Sbjct: 314  IARYEDTAAAVGLVSDNMIRVSQIPEHVVYGCVLKSFCISGRIREALGYIRELKNKEFML 373

Query: 670  PLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVD 849
               Y   +                      R  +D  ++G +++                
Sbjct: 374  LPEYFETLVKGLCRADRIADALEILDIMKKRDFVDGNVYGIIINGYLRKNDVSRALDLFH 433

Query: 850  AMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMG 1029
             MK+ G  PT   YT  + H F   + +K  + + +M E G EP  V  ++++ G++   
Sbjct: 434  GMKESGYLPTTSTYTELMQHLFNMNEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQN 493

Query: 1030 MFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFR 1209
              S+AW +F  MK KG  P  K+Y +FI  LCK  R++E L+++  M  + +      F 
Sbjct: 494  HISEAWKVFIHMKDKGIKPTSKSYMVFIKELCKISRTDEILKVLVHMQASDMRIQDEIFN 553

Query: 1210 TVFHGLNREGKQDLAHTVLQRK 1275
             V   + ++G+ D    V Q +
Sbjct: 554  WVILHMKKKGEMDSLEKVKQMR 575


>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
            subsp. vesca]
          Length = 1037

 Score =  516 bits (1328), Expect = e-143
 Identities = 249/413 (60%), Positives = 310/413 (75%)
 Frame = +1

Query: 43   YNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVD 222
            Y++ DLQ ICKIL SS DW  +QEAL K  V+FTP L L +L++   HG  AL+FFSW+ 
Sbjct: 618  YDDKDLQEICKILSSSTDWYLVQEALEKSAVVFTPGLVLSILKSHSAHGLVALQFFSWIG 677

Query: 223  QRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLT 402
            ++ GY++TT+TYNMAIKI+G  KDF+HMR L +EM+R R  IT +TW+IMIMQYGR GLT
Sbjct: 678  KQSGYRHTTDTYNMAIKIAGRGKDFKHMRNLLYEMRRNRFPITQDTWTIMIMQYGRTGLT 737

Query: 403  EIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAE 582
            EIAL  F+EMK+  C P+GSTYKYL++ LCGRKGRK+DEAI+ F EMI A H+PDKEL E
Sbjct: 738  EIALQLFREMKSN-CNPTGSTYKYLIISLCGRKGRKVDEAIKTFQEMIRAAHIPDKELVE 796

Query: 583  IYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXR 762
             Y+  LCE  K SDARRCI SLSK GFTT LSYSL I                      R
Sbjct: 797  TYIGCLCEVDKLSDARRCIDSLSKVGFTTSLSYSLYIRALCRAGRLQEASEMMDDIGEER 856

Query: 763  STLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKAL 942
            STLD+Y +GS VH             K+++MKQ G+ PTVHVYTS IVHF KEKQI++AL
Sbjct: 857  STLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIVHFLKEKQIKRAL 916

Query: 943  DTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSL 1122
            + F +M++EGCEPT+VTYS+LIRGYM+M M ++AW++FH MKLKGPSPDFKTYSMF+  L
Sbjct: 917  EIFNEMQQEGCEPTVVTYSTLIRGYMNMEMTAEAWSVFHNMKLKGPSPDFKTYSMFLHCL 976

Query: 1123 CKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWS 1281
            CK G+SEE+++LI EM+++GI+PS VNFRTVF+GLNREGK DLA TV+++K S
Sbjct: 977  CKAGKSEEAMQLITEMLNSGIIPSVVNFRTVFYGLNREGKHDLARTVMEQKSS 1029



 Score =  159 bits (403), Expect = 2e-36
 Identities = 108/442 (24%), Positives = 184/442 (41%), Gaps = 36/442 (8%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  + +I+ +     +M+E L +       E+   VL+ C    H ALRFF WV  R G+
Sbjct: 136  VHEVTRIVRAESGLVSMEERLDELRFELDSEIVDNVLKRCFKVPHLALRFFDWVKMREGF 195

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT+ YN  + I+G  K+F  + KL  EM+R       +TW+I+I  YG+A L   AL 
Sbjct: 196  CHTTKIYNTVLCIAGDVKEFGMVEKLVEEMERNSCKKDVKTWTILIQMYGKAKLVGRALL 255

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEM------------------ 543
             +++MK  G +P    ++ ++  LC     K D A+  + EM                  
Sbjct: 256  VYEKMKKFGFEPDAVVFRIMITALCA--AGKADVAMEFYKEMVQKDIGLDIKMYKLLLNS 313

Query: 544  ------------------INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTT 669
                              I    +P+  +    L+S C + +  +A   I+ L    F  
Sbjct: 314  IARYEDTAAAVGLVSDNMIRVSQIPEHVVYGCVLKSFCISGRIREALGYIRELKNKEFML 373

Query: 670  PLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVD 849
               Y   +                      R  +D  ++G +++                
Sbjct: 374  LPEYFETLVKGLCRADRIADALEILDIMKKRDFVDGNVYGIIINGYLRKNDVSRALDLFH 433

Query: 850  AMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMG 1029
             MK+ G  PT   YT  + H F   + +K  + + +M E G EP  V  ++++ G++   
Sbjct: 434  GMKESGYLPTTSTYTELMQHLFNMNEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQN 493

Query: 1030 MFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFR 1209
              S+AW +F  MK KG  P  K+Y +FI  LCK  R++E L+++  M  + +      F 
Sbjct: 494  HISEAWKVFIHMKDKGIKPTSKSYMVFIKELCKISRTDEILKVLVHMQASDMRIQDEIFN 553

Query: 1210 TVFHGLNREGKQDLAHTVLQRK 1275
             V   + ++G+ D    V Q +
Sbjct: 554  WVILHMKKKGEMDSLEKVKQMR 575


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  510 bits (1314), Expect = e-142
 Identities = 246/422 (58%), Positives = 310/422 (73%)
 Frame = +1

Query: 34   PKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFS 213
            PK  NE DL+ ICKIL SS DW  MQEAL KCT+ FTP L LE+L NC  HG+AAL+FFS
Sbjct: 648  PKSSNEQDLKEICKILSSSKDWCIMQEALEKCTLQFTPGLVLEILHNCSMHGNAALKFFS 707

Query: 214  WVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRA 393
            W+  + GY +T ETYNMA+KISG  KDF+HMR L++EM+RK  +IT +TW+IMIMQYGR 
Sbjct: 708  WLGVQTGYCHTKETYNMAMKISGREKDFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRT 767

Query: 394  GLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKE 573
            GLTEI+L  F EMK  G  P+ STYKYL++ LCG+KGRK+DEAI+IFHEMI   ++PD+E
Sbjct: 768  GLTEISLKTFTEMKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDRE 827

Query: 574  LAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXX 753
            +   YL  LCE  + S+AR+   SL + G+T PLSYSL I                    
Sbjct: 828  VVGTYLSCLCEAGRLSEARKSTDSLCRIGYTIPLSYSLYIRALCRSGRLEEALSLLDEVG 887

Query: 754  XXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIE 933
              RSTLDQY +G+LVH             K+++MK+ G+NPTVHVYTS IVHFFKEKQIE
Sbjct: 888  TERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIE 947

Query: 934  KALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFI 1113
            KA+  F+KM+++GCEPT+VTYS+LIRGYM+M    DAW++ + +KLKGP PDFKTYSMFI
Sbjct: 948  KAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFI 1007

Query: 1114 FSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSK 1293
              LCK G+SEE+L+L+  M++ GI+PST+NFRTVF GLN EGK DLA TV+Q+K +L+SK
Sbjct: 1008 SCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTVFFGLNCEGKNDLARTVMQQKLALKSK 1067

Query: 1294 RR 1299
            R+
Sbjct: 1068 RK 1069



 Score =  172 bits (435), Expect = 4e-40
 Identities = 112/437 (25%), Positives = 191/437 (43%), Gaps = 33/437 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            ++ I  I+ +  D   M+E L      F PE+  +VL+ C    H A RFFSWV  R G+
Sbjct: 147  VREITGIVRAENDLVAMEERLENLGFYFEPEIVEKVLKRCFKVPHLAFRFFSWVKMRDGF 206

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT+TY   + I+G AK+F+ +  L  EM++       +TWSI+I Q+G+A L   AL 
Sbjct: 207  CHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALL 266

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCG---------------RKGRKIDEAI--------- 525
             F++MK  GC+P    YK +V  LC                +K  ++D ++         
Sbjct: 267  FFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMA 326

Query: 526  ---------RIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLS 678
                      + ++M     +P+ ++    L+S C   K  +A   I+ L          
Sbjct: 327  KSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYE 386

Query: 679  YSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMK 858
            Y   +                      R+ +D  I+G +++                 MK
Sbjct: 387  YLGTLVKGLCRGDRITDAVEIVEIMKKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRMK 446

Query: 859  QGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFS 1038
            + G+ P    YT  +   F   Q +K  + F +M E G     V   +++  ++     S
Sbjct: 447  ESGIQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHIS 506

Query: 1039 DAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVF 1218
            +AW +F+ MK KG +P +K+YS+FI  LC+  R++E L+++ +M  + I  +   F    
Sbjct: 507  EAWEVFNTMKDKGANPTWKSYSIFIKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAI 566

Query: 1219 HGLNREGKQDLAHTVLQ 1269
              + ++G+ D    V Q
Sbjct: 567  AFMEKKGEVDNVQKVKQ 583


>ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao] gi|508716642|gb|EOY08539.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative [Theobroma cacao]
          Length = 1050

 Score =  510 bits (1313), Expect = e-142
 Identities = 248/430 (57%), Positives = 312/430 (72%)
 Frame = +1

Query: 10   DVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHG 189
            D   +Q + K YN HDL+ +C+IL SS +W   +EAL +C + FTPEL +E+LR    +G
Sbjct: 620  DYHLVQPLSKAYNVHDLEEVCRILSSSNEWCIAEEALERCNIQFTPELVVEILRRSTLYG 679

Query: 190  HAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSI 369
             +AL FFSWV ++ GY +TTETYNMAIKISGC KDF +MR+L++EMKR+  + T  TW+I
Sbjct: 680  RSALNFFSWVGKQVGYWHTTETYNMAIKISGCGKDFINMRRLFYEMKRRGCLTTPNTWAI 739

Query: 370  MIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMIN 549
            MI+QYGR G+TEIAL  F EMK E   P+ STYKYL++ LCG+KGRK+DEAI+IF EMI+
Sbjct: 740  MILQYGRTGMTEIALRTFAEMKTERFNPTASTYKYLIISLCGKKGRKVDEAIKIFQEMIH 799

Query: 550  AGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXX 729
            AGH PDKEL E YL  LCE  K  +AR C  SLSK GFT PL YSL I            
Sbjct: 800  AGHNPDKELLETYLGCLCEVGKLLEARSCTDSLSKVGFTVPLRYSLYIRALSRAGRLEEA 859

Query: 730  XXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVH 909
                      ++TLD Y++GSLVH             KVD+MKQ G+ PTVHVYTS IVH
Sbjct: 860  LEMLDNVGTEQATLDLYVYGSLVHGLLRKGRFEQALAKVDSMKQAGIYPTVHVYTSLIVH 919

Query: 910  FFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPD 1089
            FFKE+Q+E+AL  F KM++EGC+PTIVTYS++IRGYM+MG   DAWN+FH M+LK P PD
Sbjct: 920  FFKERQMERALGIFAKMKKEGCQPTIVTYSAMIRGYMNMGKVVDAWNVFHHMRLKEPKPD 979

Query: 1090 FKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQ 1269
            FKTYSMFI  LC+ GRSEE+++L+ EM ++GILPSTVNF+TVF GLNR+G+ DLA  VLQ
Sbjct: 980  FKTYSMFISCLCRIGRSEEAMQLLSEMPNSGILPSTVNFQTVFFGLNRQGRHDLAQIVLQ 1039

Query: 1270 RKWSLRSKRR 1299
            RK +L+S+R+
Sbjct: 1040 RKSALKSERK 1049



 Score =  174 bits (441), Expect = 8e-41
 Identities = 114/447 (25%), Positives = 199/447 (44%), Gaps = 37/447 (8%)
 Frame = +1

Query: 67   ICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNT 246
            I KI+ +     +M+  L K    F PE+  +VL+ C    H A RFFSWV  R G+++T
Sbjct: 146  ITKIVRAENALVSMENQLEKSGFSFEPEIVEKVLKRCFKVPHLAFRFFSWVKLREGFRHT 205

Query: 247  TETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFK 426
            T T+N  + I+G AK++  + +L  EMK K      +T +I+I QYG++ L   AL  F+
Sbjct: 206  TGTFNTMLYIAGEAKEYGLVERLLEEMKEKSCEKDIKTCTILISQYGKSKLIGKALEVFE 265

Query: 427  EMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMIN------------------- 549
             M+  GC+P  + Y+ ++  LC  +  K D A   + EM+                    
Sbjct: 266  NMRRCGCEPDAAAYRMMIRALCNAE--KCDIAFEFYKEMVEKEMSLDLNLYKMLLNCLAK 323

Query: 550  ----------------AGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSY 681
                               VP++E+    L+S C + +  +A   I+ L +   +    Y
Sbjct: 324  SGNNAAVHLVADNMMRVSQVPEQEVYGYVLKSFCISGRIREALELIRDLKEKDLSLDPQY 383

Query: 682  SLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQ 861
               +                      R  + Q ++  +++                +M++
Sbjct: 384  FETLVKGLCRADRIADALEIVDIMKRRQLVSQKVYEIIINGYLRRKDLSKALDLFKSMQE 443

Query: 862  GGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSD 1041
             G  PT   YT  + H F+  + +K  D + +M ++G EP  V   +++ G++     S+
Sbjct: 444  SGYLPTASAYTELMQHLFRLNKYQKGCDLYNEMLQKGVEPDSVAIMAMVAGHVRQKHISE 503

Query: 1042 AWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFH 1221
            AW +F  M+ +   P +  YS+FI  LCK  R++E  R++ +M +  I+     F  V  
Sbjct: 504  AWEVFKSMEDRSIRPTWTAYSIFIKELCKIARTDEIFRVLSKMQEAKIVIRDEIFHWVIS 563

Query: 1222 GLNREGKQDLAHTV--LQRKWSLRSKR 1296
             + R+G+ D    V  +QRK  L+S++
Sbjct: 564  CMERKGETDNVEKVKQMQRKCKLQSQK 590


>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Citrus sinensis]
          Length = 1040

 Score =  502 bits (1292), Expect = e-139
 Identities = 235/423 (55%), Positives = 313/423 (73%)
 Frame = +1

Query: 31   IPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFF 210
            +PK Y E DL  IC++L SS DW  +QE+L KC V FTPEL LE+L N + HG AAL FF
Sbjct: 615  LPKPYCEQDLHEICRMLSSSTDWYHIQESLEKCAVQFTPELVLEILHNSEMHGSAALHFF 674

Query: 211  SWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGR 390
            SWV ++  Y +++ TYNMAIKI+G  KDF+HMR L++EM+R   +IT +TW+IM+MQYGR
Sbjct: 675  SWVGKQADYSHSSATYNMAIKIAGRGKDFKHMRNLFYEMRRNGYLITPDTWTIMMMQYGR 734

Query: 391  AGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDK 570
            AGLTE+A+  F++MKA  C PSGSTYKYL++ L GRKGRK+D AI+IF EM+NAGH+PDK
Sbjct: 735  AGLTEMAMRVFEDMKANDCNPSGSTYKYLIISLSGRKGRKVDHAIKIFQEMVNAGHIPDK 794

Query: 571  ELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXX 750
            EL EIYL  LCE      A+ C+  L K GFT PLSYSL I                   
Sbjct: 795  ELVEIYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYSLYIRALCRAGELEEALALLDEV 854

Query: 751  XXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQI 930
               RS LD+++FGSL+H             KV+ MKQ G+ PTVHVYTSF+VHFF+EKQ+
Sbjct: 855  KEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQV 914

Query: 931  EKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMF 1110
             +AL+ F++MR+EGCEPT+VTY++LI+G++++G  ++AW++F+RMK+KGP PDF+TYSMF
Sbjct: 915  GRALEIFERMRQEGCEPTVVTYTALIQGFVNLGKVAEAWDVFYRMKIKGPFPDFRTYSMF 974

Query: 1111 IFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRS 1290
            I  LCK G+SEE+L+L+ EM ++GI+PS +NFRT+F GLNREGK+DLA +V+Q+K +L +
Sbjct: 975  IGCLCKVGKSEEALQLLSEMTESGIVPSNINFRTIFFGLNREGKRDLARSVVQKKCTLIN 1034

Query: 1291 KRR 1299
             R+
Sbjct: 1035 SRK 1037



 Score =  172 bits (435), Expect = 4e-40
 Identities = 108/435 (24%), Positives = 194/435 (44%), Gaps = 33/435 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I +I+ +  D  +M+E L   +  F PE+  +VL+ C    H ALRFF+WV  R G+
Sbjct: 132  VHEITEIVRAGNDVVSMEERLENLSFRFEPEVVDKVLKRCFKVPHLALRFFNWVKLREGF 191

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TTETYN  + I+G AK+ E + +L  EM+        +TW+I++  YG+A L   AL 
Sbjct: 192  CHTTETYNTMLTIAGEAKELELLEELEREMEINSCEKNIKTWTILVSLYGKAKLIGKALL 251

Query: 418  KFKEMKAEGCKPSGSTYK---------------------------------YLVVFLCGR 498
             F++M+  G +P    YK                                 Y +V  C  
Sbjct: 252  VFEKMRKYGFEPDAVAYKVLVRSLCNAGKGDIALEFYKEMAQKEMVLDLSLYKIVMNCAA 311

Query: 499  KGRKIDEAIRIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLS 678
            K   +D  + I  +M+    +P+++     L+S C + +  +A   I++L     +    
Sbjct: 312  KLGDVDAVLSIADDMVRISQIPERDAYGCVLKSFCVSMRIREALEFIRNLKSKEISMDRD 371

Query: 679  YSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMK 858
            +   +                      R+ +D  I+G ++              + + MK
Sbjct: 372  HFETLVKGLCIAGRISDALEIVDIMMRRNLVDGKIYGIIISGYLRKNDLSKALVQFERMK 431

Query: 859  QGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFS 1038
            + G  P    YT  + H FK  + +K  + + +M + G +P  V  ++++ G++     S
Sbjct: 432  ESGYLPMASTYTELMQHLFKLNEYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLS 491

Query: 1039 DAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVF 1218
            +AW +F  M+ KG  P  K+YS+FI  LC+  R+ E L++++ M  + I+     F  V 
Sbjct: 492  EAWKVFKCMEDKGIRPTGKSYSVFIKELCRVSRTNEILKVLNNMQASKIVIGDEIFHWVI 551

Query: 1219 HGLNREGKQDLAHTV 1263
              + ++G+ +    V
Sbjct: 552  SCMEKKGEMESVEKV 566


>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
            gi|557532087|gb|ESR43270.1| hypothetical protein
            CICLE_v10010964mg [Citrus clementina]
          Length = 1040

 Score =  500 bits (1288), Expect = e-139
 Identities = 234/423 (55%), Positives = 311/423 (73%)
 Frame = +1

Query: 31   IPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFF 210
            +PK Y E DL  IC++L SS DW  +QE+L KC V +TPEL LE+L N + HG AAL FF
Sbjct: 615  LPKPYCEQDLHEICRMLSSSTDWYHIQESLEKCAVQYTPELVLEILHNSEMHGSAALHFF 674

Query: 211  SWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGR 390
            SWV ++  Y +++ TYNMAIKI+G  KDF+HMR L++EM+R   +IT +TW+IM+MQYGR
Sbjct: 675  SWVGKQADYSHSSATYNMAIKIAGRGKDFKHMRNLFYEMRRNGYLITPDTWTIMMMQYGR 734

Query: 391  AGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDK 570
            AGLTE+A+  F++MKA GC PSGSTYKYL++ L GRKGRK+D AI+IF EM+NAGH+PDK
Sbjct: 735  AGLTEMAMRVFEDMKANGCNPSGSTYKYLIISLSGRKGRKVDHAIKIFQEMVNAGHIPDK 794

Query: 571  ELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXX 750
            EL E YL  LCE      A+ C+  L K GFT PLSYSL I                   
Sbjct: 795  ELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYSLYIRALCRAGELEEALALLDEV 854

Query: 751  XXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQI 930
               RS LD+++FGSL+H             KV+ MKQ G+ PTVHVYTSF+VHFF+EKQ+
Sbjct: 855  KEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQV 914

Query: 931  EKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMF 1110
             +AL+ F++MR+EGCEPT+VTY++LI+G+ ++G  ++AW++F+RMK+KGP PDF+TYSMF
Sbjct: 915  GRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMF 974

Query: 1111 IFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRS 1290
            I  LCK G+SEE+L L+ EM ++GI+PS +NFRT+F GLNREGK+DLA +V+Q+K +L +
Sbjct: 975  IGCLCKVGKSEEALELLSEMTESGIVPSNINFRTIFFGLNREGKRDLARSVVQKKCTLIN 1034

Query: 1291 KRR 1299
             R+
Sbjct: 1035 SRK 1037



 Score =  169 bits (427), Expect = 3e-39
 Identities = 107/435 (24%), Positives = 192/435 (44%), Gaps = 33/435 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I +I+ +  D  +M+E L   +  F PE+  +VL+ C    H ALRFF+WV  R G+
Sbjct: 132  VHEITEIVRAGNDVVSMEERLENLSFRFEPEVVDKVLKRCFKVPHLALRFFNWVKLREGF 191

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             + TETYN  + I+G AK+ E + +L  EM+        +TW+I++  YG+A L   AL 
Sbjct: 192  CHATETYNTMLTIAGEAKELELLEELEREMEINSCAKNIKTWTILVSLYGKAKLIGKALL 251

Query: 418  KFKEMKAEGCKPSGSTYK---------------------------------YLVVFLCGR 498
             F++M+  G +P    YK                                 Y +V  C  
Sbjct: 252  VFEKMRKCGFEPDAVAYKVLVRSLCNAGKGDIALEFYKEMAQKEMVLDLSLYKIVMNCAA 311

Query: 499  KGRKIDEAIRIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLS 678
            K   +D  + I  +M+    +P+++     L+S C + +  +A   I++L     +    
Sbjct: 312  KLGDVDAVLSIADDMVRISQIPERDAYGCVLKSFCVSMRIREALEFIRNLKSKEISMDRD 371

Query: 679  YSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMK 858
            +   +                      R+ +D  I+G ++              + + MK
Sbjct: 372  HFETLVKGLCIAGRISDALEIVDIMMRRNLVDGKIYGIIIGGYLRKNDLSKALVQFERMK 431

Query: 859  QGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFS 1038
            + G  P    YT  + H FK    +K  + + +M + G +P  V  ++++ G++     S
Sbjct: 432  ESGYLPMASTYTELMQHLFKLNDYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLS 491

Query: 1039 DAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVF 1218
            +AW +F  M+ KG  P  K+YS+FI  LC+  R+ E L++++ M  + I+     F  V 
Sbjct: 492  EAWKVFKCMEDKGIRPTRKSYSVFIKELCRVSRTNEILKVLNNMQASKIVIGDEIFHWVI 551

Query: 1219 HGLNREGKQDLAHTV 1263
              + ++G+ +    V
Sbjct: 552  SCMEKKGEMESVEKV 566


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  498 bits (1282), Expect = e-138
 Identities = 240/421 (57%), Positives = 307/421 (72%)
 Frame = +1

Query: 37   KFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSW 216
            K Y++ D+  I +IL SS DW+ +QE L K T+ F+PEL +E+L++C  HG + L+FFSW
Sbjct: 611  KNYSKQDVHEIRRILSSSTDWSLIQEKLEKSTIQFSPELVMEILQSCNMHGSSVLKFFSW 670

Query: 217  VDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAG 396
            + ++ GY++T E+YN+AIKI+GC KDF+HMR L+ EM+R    ITSETW+IMIM YGR G
Sbjct: 671  IGKQTGYRHTAESYNIAIKIAGCGKDFKHMRSLFFEMRRNSYPITSETWTIMIMVYGRTG 730

Query: 397  LTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKEL 576
            LTE+A+N FKEMKA+   PS STYKYL++ LCGRKGRK+D+A++I+ EMI+AG+VPDKEL
Sbjct: 731  LTEMAMNCFKEMKADDYVPSRSTYKYLIIALCGRKGRKVDDALKIYGEMISAGYVPDKEL 790

Query: 577  AEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXX 756
             E YL  LCE  +  DARRC  SL   G+T PLSYSL I                     
Sbjct: 791  IETYLGCLCEVGRVLDARRCTDSLQNFGYTVPLSYSLFIRALCRAGKVEEALALHEEVGE 850

Query: 757  XRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEK 936
             +  +DQ  FGS+VH             KVD MKQ G+ PT+HV+TS IVHFFKEKQ+EK
Sbjct: 851  EKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKEKQVEK 910

Query: 937  ALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIF 1116
            A++TF++M   G EPTIVTYS+LIRGYM++G   DAW++F+RMKLKGP PDFKTYSMF+ 
Sbjct: 911  AIETFEEMLHSGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSMFLT 970

Query: 1117 SLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKR 1296
             LCK G+SEE +RLI EM+D+GI+PST+NFRTV +GLNREGK DLA  VLQ+K  LR KR
Sbjct: 971  CLCKVGKSEEGMRLISEMLDSGIVPSTINFRTVVYGLNREGKHDLARVVLQQKSELRRKR 1030

Query: 1297 R 1299
            +
Sbjct: 1031 K 1031



 Score =  144 bits (362), Expect = 1e-31
 Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 34/405 (8%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I +I+    D ++++E L   +     E+   VL+ C      ALR F+W+  + G+
Sbjct: 127  VSEITEIVRVENDSSSVEERLENLSYGLNSEVFHMVLKRCFKVPQLALRVFNWLKLKDGF 186

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT TYN  + I+  AK+F  ++KL  EM    +     TW+I+I  YG+A     AL 
Sbjct: 187  SHTTRTYNTMLHIAREAKEFGLVKKLVEEMDECGIQKDVNTWTIIINHYGKARKISEALL 246

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKI-----DEAIR------------------ 528
             F+ MK  GC+P   +Y  ++  LC    R I     +E +R                  
Sbjct: 247  AFENMKRCGCEPDAVSYGAIICSLCSAGKRDIAMEFYNEMVRKDMVLDVRLYKMVMNCMA 306

Query: 529  ----------IFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSL-SKCGFTTPL 675
                      + ++MI    +P+K +    L+S C +    +A   I+ L SK     P 
Sbjct: 307  RSGDIAAVSLLGNDMIRLSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEPE 366

Query: 676  SYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAM 855
            +Y  ++                      R  +D  + G +++                 M
Sbjct: 367  NYETLVRGLCKAGRITDALEIVDIMKR-RDMVDGRVHGIIINGYLGRNDVDRALEVFQCM 425

Query: 856  KQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMF 1035
            K+ G  PT+  YT  ++H F+  + E+A   + +M  +G +P +V  ++++ G++     
Sbjct: 426  KESGCVPTISTYTELMLHLFRLDRYEEACMLYDEMLGKGIKPDVVAITAMVAGHVSQNHI 485

Query: 1036 SDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEM 1170
            SDAW +F  M+ +G  P +K++++FI  LCK  ++++ ++++ EM
Sbjct: 486  SDAWKMFKSMECQGIKPTWKSFAVFIKELCKASQTDDIVKVLHEM 530


>ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [Amborella trichopoda]
            gi|548830738|gb|ERM93661.1| hypothetical protein
            AMTR_s00004p00162290 [Amborella trichopoda]
          Length = 961

 Score =  494 bits (1273), Expect = e-137
 Identities = 239/421 (56%), Positives = 303/421 (71%)
 Frame = +1

Query: 37   KFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSW 216
            K Y++ DLQ  C+IL+S  DW+ +QE L K T+ FTP L  E++R CQ HG++ LRFFSW
Sbjct: 542  KTYSDQDLQDACRILLSFSDWSVLQEGLEKSTIKFTPHLVHEIMRKCQIHGNSTLRFFSW 601

Query: 217  VDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAG 396
            V + PGY +TTETYN+AIKISG AKDF+HM+ LY EM+RK  +IT++TW+IM+ QYGR G
Sbjct: 602  VGRIPGYHHTTETYNLAIKISGSAKDFKHMKSLYLEMRRKGCLITADTWTIMLAQYGRVG 661

Query: 397  LTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKEL 576
            LT +AL +FK MK +   P  +TYKY+++FLCG+KGRK++EAI IF EM+  G  PD+E 
Sbjct: 662  LTNMALRRFKAMKFKKYNPDRNTYKYMIMFLCGKKGRKVEEAILIFKEMLGVGFSPDQET 721

Query: 577  AEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXX 756
             EIYL  LCE  K SDAR C+ SLSK  FT    YS+++                     
Sbjct: 722  LEIYLTCLCEVGKLSDARDCVDSLSKVSFTDQFRYSVLVKALCRAGKLDEALALSKEL-- 779

Query: 757  XRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEK 936
               TLDQYI+GSLVH              V  M   G +PTVHVYTSF+VH+FKEKQ+EK
Sbjct: 780  --GTLDQYIYGSLVHGLLRAGRVDEALKMVGKMTLDGFSPTVHVYTSFLVHYFKEKQMEK 837

Query: 937  ALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIF 1116
            AL+ F+KMRE+GCEP+I+TYS+LIRGYM+ G+  DAWN F  MKLKGP PDF+TYSMFI 
Sbjct: 838  ALEIFRKMREDGCEPSIITYSALIRGYMNQGLAIDAWNTFWLMKLKGPFPDFETYSMFIS 897

Query: 1117 SLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKR 1296
             LC+ GRSEE+L+LI +MM+ GI+PST+NFRTV++GLNREGK DLAHTVLQ KW+L  +R
Sbjct: 898  CLCRDGRSEEALQLIYDMMEDGIIPSTLNFRTVYYGLNREGKHDLAHTVLQAKWALMKRR 957

Query: 1297 R 1299
            +
Sbjct: 958  K 958



 Score =  158 bits (399), Expect = 6e-36
 Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 34/438 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I +I+       +M+ +L +  + F  +   ++L+ C     AA+RFF WV  +PG+
Sbjct: 47   VHRITEIIRDENSTFSMEHSLGEAGLTFDSDTVDKILKRCFKARDAAIRFFYWVKLQPGF 106

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
            ++T +TYN  + I+G AK+F+ +++L  EM  +      +TW+I++  YG+A     AL 
Sbjct: 107  QHTAQTYNTMLYIAGEAKEFDLIKRLLDEMNSEECPKDIKTWTILVSHYGKAKQLGEALK 166

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRK---------------GRKID------------ 516
             FKEMK  G  P  + Y  +V+ LC  +               G K+D            
Sbjct: 167  TFKEMKKSGFDPDETVYGSMVLSLCNARKSELAAEFYKEMALSGMKLDSHGYKLLMTCLG 226

Query: 517  EAIRIF------HEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLS 678
            EA  IF      ++M+    +P   +    +QSL  + +F DA + +  +   G  + L 
Sbjct: 227  EAGDIFGVRSVGNDMLKIAGMPKCAVHSSMMQSLSISGRFGDAIKLVNEIR--GENSSLE 284

Query: 679  -YSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAM 855
             Y ++                          +D+ ++  L++              +++M
Sbjct: 285  EYQVLFKGLCRACRMNNALELLGVICKHEGAIDRDVYEILINGYLRIGEISVACVLLNSM 344

Query: 856  KQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMF 1035
            K+ G  P+V  YT  + H F+    E+    +++M+E G EP +V  ++L+ G++    F
Sbjct: 345  KKLGFLPSVSTYTDIVQHLFRMNAYEEGCRLYEEMKESGLEPDVVAMTALVAGHVCHSQF 404

Query: 1036 SDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTV 1215
            S A   F  MK +G  P +K YS++I  LCK    E++  L+ EM    +       + V
Sbjct: 405  SKAKEAFDNMKERGIKPTWKAYSIYIKELCKINEPEQAFELLKEMKSFKMNAGQETCQIV 464

Query: 1216 FHGLNREGKQDLAHTVLQ 1269
               L + GK +    V Q
Sbjct: 465  ISLLEKAGKLEKVQLVKQ 482


>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Cicer arietinum]
          Length = 1045

 Score =  494 bits (1271), Expect = e-137
 Identities = 237/433 (54%), Positives = 313/433 (72%)
 Frame = +1

Query: 1    ERADVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQ 180
            E+ D   +  I K Y++ D+  ICKIL SS+DW+++QE L K ++ FTPE  +E+L+ C 
Sbjct: 610  EKIDCSLLHPILKTYSDQDVGDICKILSSSLDWSSIQEKLEKSSIQFTPEFVMEILQICG 669

Query: 181  CHGHAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSET 360
             HG   L+FFSWV ++PGY++T E+YN+AIKI+G  KDF+HMR L++EM+R   +ITSET
Sbjct: 670  MHGCTVLKFFSWVGKQPGYRHTAESYNIAIKIAGQGKDFKHMRSLFYEMRRNGYLITSET 729

Query: 361  WSIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHE 540
            W+IMIM YGR GLTE+A+N F EMKA G  PS STYKYL++ LCGRKGRK+D+A++ + E
Sbjct: 730  WTIMIMLYGRTGLTEMAMNCFNEMKAGGNSPSRSTYKYLIIALCGRKGRKVDDALKTYSE 789

Query: 541  MINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXX 720
            MI++GHVPDKEL E YL  LCE  +  +AR+CI SL + G+  PLSYSL I         
Sbjct: 790  MISSGHVPDKELIETYLGCLCEVGRILEARKCIDSLQRFGYAVPLSYSLFIRALCRAGKV 849

Query: 721  XXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSF 900
                         +S +++  +GS+VH             KV  MKQ G+ PT+HVYTS 
Sbjct: 850  EEALALIDGVGPEKSIVEKLTYGSIVHGLLHKGKLEEALAKVHGMKQEGITPTIHVYTSL 909

Query: 901  IVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGP 1080
            IVHFFKEK+IEKA++T+ +M++ G EP +VTYS+LIRGYM+MG  +DAWN+F+RMK KGP
Sbjct: 910  IVHFFKEKKIEKAIETYDEMQKSGYEPNVVTYSALIRGYMNMGRPNDAWNVFYRMKFKGP 969

Query: 1081 SPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHT 1260
             PDFKTYSMF+  LCK GRSEE++RLI EM+++GI+PST+NFRTVF+GLNREGK  LA  
Sbjct: 970  FPDFKTYSMFLCCLCKDGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNREGKYGLAQV 1029

Query: 1261 VLQRKWSLRSKRR 1299
            VLQ+K  L  KR+
Sbjct: 1030 VLQQKSELIRKRK 1042



 Score =  147 bits (372), Expect = 8e-33
 Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 35/404 (8%)
 Frame = +1

Query: 163  VLRNCQCHGHAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRM 342
            VL+ C      ALR F+W+  + G+ +TT+TYN  + I+G AK+F  ++KL  EM    +
Sbjct: 171  VLKRCFKMPCLALRVFNWLKIKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECGV 230

Query: 343  VITSETWSIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLC---------- 492
                 TW+I+I  YG+A     AL  F+ M+  GC+P   +++ ++  LC          
Sbjct: 231  QKDVNTWTILISHYGKAKKISEALLAFENMQKCGCEPDAVSFRTVIRLLCISGKGDIAME 290

Query: 493  -----GRKGRKIDEAIRIFHEMIN----AGHV----------------PDKELAEIYLQS 597
                  RK   +D+ +R++  ++N    +G V                P+  +    L+S
Sbjct: 291  FYKDMVRKDIALDD-VRLYKMLMNCLAKSGDVEAVSLLGNDMTRLCLMPENSILGCMLKS 349

Query: 598  LCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQ 777
             C + +  +A   I+ L          Y   +                      R  +D 
Sbjct: 350  FCISGRIKEALELIRDLKYKDVVLEPEYFETLVRGLCKAGRISDALEIVEIMKRRDIVDG 409

Query: 778  YIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKK 957
             I+G ++                 +MK+ G  P ++ YT  I H F+  + E+A   + +
Sbjct: 410  NIYGIIISGYLSRNDVRTAIDLFQSMKESGYVPMIYTYTELIQHLFRLSRYEEACMLYDE 469

Query: 958  MREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGR 1137
            M  +G +P IV  ++++ G++     S+AW +F  M+L+G  P +K+YS+FI  LCK  R
Sbjct: 470  MLGKGIKPDIVAITAMVAGHVSHNRISEAWKIFKSMELQGIKPTWKSYSVFIKELCKASR 529

Query: 1138 SEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQ 1269
            +++ ++++ EM  + I+     F  V   +  +G+  L   V Q
Sbjct: 530  TDDIVKVLYEMQGSKIVIKDEVFDWVITYMENKGELALKEKVQQ 573


>ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
            gi|561018960|gb|ESW17764.1| hypothetical protein
            PHAVU_007G266200g [Phaseolus vulgaris]
          Length = 1069

 Score =  489 bits (1260), Expect = e-136
 Identities = 240/430 (55%), Positives = 302/430 (70%)
 Frame = +1

Query: 10   DVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHG 189
            D  S+    K   E +   IC+IL SS DW+ +QE L + T  FTPEL +E+L+NC  +G
Sbjct: 637  DYSSIHRNLKTCTEQNFHEICRILSSSPDWSLIQEKLERSTFHFTPELVMEILQNCNMNG 696

Query: 190  HAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSI 369
             + L+FFSWV  + GY++T E+YNMA+KI+GC KDF+HMR L+ EM+R    IT ETW+I
Sbjct: 697  SSVLKFFSWVGNQSGYRHTLESYNMAMKIAGCGKDFKHMRSLFFEMRRNSYPITPETWTI 756

Query: 370  MIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMIN 549
            MIM YGR GLTE+A+N FKEMKA G  PS STYKYL++  CGRKGRK+D+A+  + EMI 
Sbjct: 757  MIMLYGRTGLTEMAMNCFKEMKANGYSPSRSTYKYLIIAFCGRKGRKVDDALETYREMIG 816

Query: 550  AGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXX 729
            AG+ PDKEL E YL  LCE  +  +ARRC  SL   G+T PLSYSL I            
Sbjct: 817  AGYAPDKELIEAYLSCLCEVGRVLEARRCADSLQNFGYTAPLSYSLFIRTLCRAGRVEEA 876

Query: 730  XXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVH 909
                      +S +DQ   GS+VH             KV+AMKQ G+ PT+HVYTS IVH
Sbjct: 877  LALITEVGEEKSIIDQLTCGSIVHGLLRKGRLQEALAKVEAMKQKGIAPTIHVYTSLIVH 936

Query: 910  FFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPD 1089
            FFKEKQ+EKA++TF++M++ G EP IVTYS LIRGYM++G   DAWN+F+RMKLKGP PD
Sbjct: 937  FFKEKQVEKAIETFEEMQQSGYEPNIVTYSVLIRGYMNVGRPIDAWNIFYRMKLKGPFPD 996

Query: 1090 FKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQ 1269
            FKTYSMF+  LCK GRSEE+++LI EM+D+GI+PST+NFRTVF+GLNREGK  LA  VLQ
Sbjct: 997  FKTYSMFLTCLCKVGRSEEAMQLIFEMLDSGIVPSTINFRTVFYGLNREGKNALARVVLQ 1056

Query: 1270 RKWSLRSKRR 1299
            +K  LR KR+
Sbjct: 1057 QKSELRRKRK 1066



 Score =  149 bits (375), Expect = 4e-33
 Identities = 105/442 (23%), Positives = 194/442 (43%), Gaps = 36/442 (8%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I +I+      T+M+E L   +     E+   VL+ C      A R F+W+  + GY
Sbjct: 162  VDEITEIVRGENGSTSMEERLESLSYGLNSEVFDMVLKRCFKVPQLAFRAFNWLKLKEGY 221

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
             +TT+T N  + I+G AK+F  +++L  EM    +    +TW+I++  YG+A     AL 
Sbjct: 222  SHTTQTCNTMLYIAGEAKEFGWVKRLVEEMDECGIQKDVKTWTILVTHYGKARKISEALL 281

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCG---------------RKGRKIDEAIRIF------ 534
             F+ MK  G +P   +Y  ++  LC                RK    D  +R++      
Sbjct: 282  AFENMKRCGYEPDAVSYSAIIRSLCSADKGDIAMEFYSDMVRKDMVCD--VRLYKTIMNC 339

Query: 535  --------------HEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTT- 669
                          ++MI    +P+  +    L+S C + +  +A   I+ L        
Sbjct: 340  MARSGDVAAVSLLGNDMIRLSVMPENGVHSCMLKSFCISGRIEEALELIRDLKNKDLDVE 399

Query: 670  PLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVD 849
            P +Y +++                      R T+D  I G +++                
Sbjct: 400  PENYEILVRGLCKADRITDALEIVEIMKR-RDTVDGRIHGIIINGYLGRNDFDRALKVFQ 458

Query: 850  AMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMG 1029
            +MK+ G  PT+  YT  I H F+  + E+A   + +M  +G +P IV  ++++ G++   
Sbjct: 459  SMKESGCVPTISTYTELIQHLFRLSRYEEACMMYDEMLGKGIKPDIVAITAMVAGHVSQN 518

Query: 1030 MFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFR 1209
              S+AW +F+ M+ +   P +K+Y++FI  LCK  R+E+ ++++ EM  + I      FR
Sbjct: 519  RISEAWKMFNCMECQDIKPTWKSYAVFIKELCKASRTEDIVKVLHEMQASNIKIQDTLFR 578

Query: 1210 TVFHGLNREGKQDLAHTVLQRK 1275
             V   +  +G+  +   + Q +
Sbjct: 579  WVITYMEEKGELTMIEKIQQMR 600


>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Solanum tuberosum]
          Length = 1087

 Score =  472 bits (1215), Expect = e-130
 Identities = 233/430 (54%), Positives = 304/430 (70%)
 Frame = +1

Query: 10   DVPSMQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHG 189
            D+P  + I K   E D+  +C+IL+SS DW  +QE L KC + FTPE+ +EVLRN +  G
Sbjct: 657  DMP--EAISKSSIECDVHEVCQILISSRDWYLIQEQLEKCNIQFTPEIVMEVLRNFRLQG 714

Query: 190  HAALRFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSI 369
              AL+FFSWV+++  Y++TTE+YN AIKI+G  KDF  MR L+ +M+R   ++T+ TW+I
Sbjct: 715  RLALQFFSWVEKQSSYRHTTESYNTAIKIAGQGKDFTQMRNLFSDMRRNGCLVTAHTWTI 774

Query: 370  MIMQYGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMIN 549
            MIMQYGR GLT+IA++ FKEMK  GCKP+ STYK L+  LC +KGR+IDEA++IF EMI 
Sbjct: 775  MIMQYGRTGLTDIAVHTFKEMKDSGCKPTESTYKALITSLCQKKGRRIDEAVKIFQEMIQ 834

Query: 550  AGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXX 729
             GH PDKEL E YL  LCE  K  DAR C +SL K GF+TPL+YSL I            
Sbjct: 835  VGHSPDKELIEDYLGCLCELGKLRDARSCTESLLKLGFSTPLAYSLYIRSLCRAWRLEEA 894

Query: 730  XXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVH 909
                      +  L QY++GSLVH             ++++MKQ G++PTVHVYTS I +
Sbjct: 895  LALINEVDDEQHVLSQYVYGSLVHGLLQKGQLEEALGRIESMKQAGIHPTVHVYTSLIGY 954

Query: 910  FFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPD 1089
            FFK KQ  KAL+TFK+M++ GC+PTIVTYS+LIRGYM++G  S+A ++FH+MK  GP PD
Sbjct: 955  FFKVKQAGKALETFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFHQMKKNGPYPD 1014

Query: 1090 FKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQ 1269
            FK YSMFI  LC+ G SEE+L+LI EM+D GI+PSTVN+RTVF+GLNREGKQDLA TVL 
Sbjct: 1015 FKAYSMFISCLCRIGYSEEALQLISEMLDVGIVPSTVNYRTVFYGLNREGKQDLAKTVLH 1074

Query: 1270 RKWSLRSKRR 1299
             K  ++ +R+
Sbjct: 1075 IKLDVKRRRK 1084



 Score =  144 bits (363), Expect = 9e-32
 Identities = 101/426 (23%), Positives = 178/426 (41%), Gaps = 35/426 (8%)
 Frame = +1

Query: 67   ICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNT 246
            I  IL S  D   M+E L      +  E+  +VL+ C    H ALRFF W+  R G+ +T
Sbjct: 184  ITGILRSECDVIAMEEQLESAGFEYNEEVVEKVLKRCFKVPHLALRFFDWLKTREGFSHT 243

Query: 247  TETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFK 426
            TETYN  I ++   K+F  + +L  EM+R       +TWSI++  YG   L   AL+ F+
Sbjct: 244  TETYNTMIYMAADCKEFRLVDELVEEMERSSCQKNLKTWSILLSHYGNGKLIGKALSMFE 303

Query: 427  EMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAG----------------- 555
            ++K  G +P    Y  ++  LC     K D A+  F+EMI+ G                 
Sbjct: 304  QLKKLGYEPDLRAYTIMLSSLCN--AGKADIALEYFNEMIHKGLMLDAAMSGQLLKCLAN 361

Query: 556  ------------------HVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSY 681
                               +P+  +  + L+S C   + ++A   I+ L           
Sbjct: 362  SGNIAAVHKVGDDMIRVCSIPENRVYSLMLKSFCIAGRITEALELIRDLKSKNKNLDSEI 421

Query: 682  SLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQ 861
               +                      R+  D+ ++ +L+                 +MK 
Sbjct: 422  FTTLVKGLCKAERINDALEIVEILKKRNGADEKVYAALISAYLRRNEISKALNLFQSMKD 481

Query: 862  GGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSD 1041
             G    +  YT+ + H F+ K+ ++AL+ + +M E G +   V  ++++ GY+     S+
Sbjct: 482  SGSLLNISTYTNLMQHLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAGYIIQNRISE 541

Query: 1042 AWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFH 1221
             W +F  MK KG     K++ +F+  L K   + +  ++++EM  + +      ++ V  
Sbjct: 542  MWEVFENMKDKGIVFTRKSHLIFVKELTKVSGTTDIFKVLNEMKASKMFIGNDIYQYVIS 601

Query: 1222 GLNREG 1239
             L R+G
Sbjct: 602  YLERKG 607


>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Solanum lycopersicum]
          Length = 1092

 Score =  463 bits (1191), Expect = e-128
 Identities = 225/417 (53%), Positives = 295/417 (70%)
 Frame = +1

Query: 49   EHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQR 228
            E D++ IC+IL+SS DW  +QE L  C + FTPE+ +EVLRN +  G  AL+FFSWV+++
Sbjct: 673  ECDVREICQILISSRDWYLIQEQLENCNIQFTPEIVMEVLRNFKLQGRLALQFFSWVEKQ 732

Query: 229  PGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEI 408
              Y++TTE+YN AIKI+G  KDF  MR L+ +M+R   ++T+ TW+IMIM YGR GLT+I
Sbjct: 733  SSYRHTTESYNTAIKIAGQGKDFTQMRNLFSDMRRNGCLVTAHTWTIMIMLYGRTGLTDI 792

Query: 409  ALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAEIY 588
            A+  FKEMK  GCKP+ STYK L+  LC +KGR+IDEA++IF EMI  G+ PDKEL E Y
Sbjct: 793  AVRTFKEMKHSGCKPTESTYKALITSLCQKKGRRIDEAVKIFQEMIQVGYSPDKELIEDY 852

Query: 589  LQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRST 768
            L  LCE  K  DAR C +SL K GF+TPL+YSL I                      +  
Sbjct: 853  LGCLCELGKLRDARSCTESLLKLGFSTPLAYSLYIRSLCRAWRLEEALALINEVDDEQHV 912

Query: 769  LDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDT 948
            L QY++GSLVH             ++++MKQ G++PTVHVYTS I +FFK KQ+ KAL T
Sbjct: 913  LSQYVYGSLVHGLLQKGNLEEALARIESMKQTGIHPTVHVYTSLIGYFFKVKQVSKALQT 972

Query: 949  FKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCK 1128
            FK+M++ GC+PTIVTYS+LIRGYM++G  S+A ++FH+MK  GP PDF  YSMFI  LC+
Sbjct: 973  FKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFHQMKKNGPYPDFNAYSMFISCLCR 1032

Query: 1129 QGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKRR 1299
             G SEE+L+LI EM++ GI+PSTVN+RTVF+GLNREGKQDLA TVL  K  ++ +R+
Sbjct: 1033 IGNSEEALQLISEMLNIGIIPSTVNYRTVFYGLNREGKQDLAKTVLHMKLDVKRRRK 1089



 Score =  144 bits (363), Expect = 9e-32
 Identities = 103/426 (24%), Positives = 177/426 (41%), Gaps = 35/426 (8%)
 Frame = +1

Query: 67   ICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNT 246
            I  IL S  D   M+E L      +  ++  +VL+ C    H ALRFF W+  R G+ +T
Sbjct: 189  ITGILRSECDVIAMEEQLESAGFEYNEDVVEKVLKRCFKVPHLALRFFDWLKTREGFSHT 248

Query: 247  TETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFK 426
            TETYN  I ++   K+F  + +L  EM+R       +TWSI++  YG   L   AL+ F+
Sbjct: 249  TETYNTMIYMAADCKEFRLVDELVEEMERSSCRKNLKTWSILLSHYGNGKLIGKALSLFE 308

Query: 427  EMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAG----------------- 555
            ++K  G +P    Y  ++  LC     K D A+  F+EMI+ G                 
Sbjct: 309  QLKKLGYEPDLRAYTIMLSSLCN--AGKADIALEYFNEMIHKGLMLDEATSGQLLKCLAN 366

Query: 556  ------------------HVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSY 681
                               +P+  +  + L+S C T + ++A   I+ L           
Sbjct: 367  SGNIAAVHKVGDDMIRVCSIPENHVYRLMLKSFCITGRITEALELIRDLKSKNMNLDSEI 426

Query: 682  SLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQ 861
               +                      R+  D+ ++  L+                 +MK 
Sbjct: 427  FTTLVKGLCKAERINDALEIVEILKKRNGADEKVYAVLISAYLRRNEISKALNLFQSMKD 486

Query: 862  GGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSD 1041
             G    V  YT+ +   F+ K+ ++AL+ + +M E G +   V  ++++ GY+     S+
Sbjct: 487  SGSLLNVSTYTNLMQRLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAGYIIQNRISE 546

Query: 1042 AWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFH 1221
             W +F  MK KG     K+Y +F+  L K   + +  ++++EM  + +      F+ V  
Sbjct: 547  MWQVFENMKDKGIVFTRKSYLIFVKELTKVSGTTDIFKVLNEMKASKMCIGNDIFQYVIS 606

Query: 1222 GLNREG 1239
             L R+G
Sbjct: 607  YLERKG 612


>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
            gi|557100203|gb|ESQ40566.1| hypothetical protein
            EUTSA_v10012543mg [Eutrema salsugineum]
          Length = 1036

 Score =  460 bits (1183), Expect = e-127
 Identities = 225/415 (54%), Positives = 290/415 (69%)
 Frame = +1

Query: 55   DLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPG 234
            D+Q IC++L SS DW  +QEAL K TV FTPEL +EVLRN +  G+  LRFFSWV +R G
Sbjct: 619  DVQQICRMLSSSRDWERIQEALEKSTVEFTPELVVEVLRNGKIQGNGVLRFFSWVGKRNG 678

Query: 235  YKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIAL 414
            YK++TE YNM+IK++G  KDF+ MR L++EM+R+  VIT +TW+IMIMQYGR GLT IA+
Sbjct: 679  YKHSTEAYNMSIKVAGGGKDFKQMRNLFYEMRRQGCVITQDTWAIMIMQYGRTGLTNIAI 738

Query: 415  NKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAEIYLQ 594
              FKEMK  G  PS ST+K L+  LC +KGR ++EA R F EMI +G+VPD+EL + YL 
Sbjct: 739  RTFKEMKDMGLMPSSSTFKCLITVLCQKKGRNVEEASRTFREMIRSGYVPDRELVQDYLG 798

Query: 595  SLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLD 774
             LCE     DA+ C+ SL K GF  P++YS+ I                      RS L+
Sbjct: 799  CLCEVGNIKDAKSCLVSLGKIGFPVPVAYSIFIRALCRIGKLEEALSELASFKGERSLLE 858

Query: 775  QYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFK 954
            QY +GS+VH             KV++MK+ G+ P VHVYTS IVHFFKEKQIEK L+T +
Sbjct: 859  QYTYGSIVHGLLEKGHLQKALDKVNSMKEMGIKPGVHVYTSLIVHFFKEKQIEKVLETCQ 918

Query: 955  KMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQG 1134
            KM EE CEP++VTY+++I GYM +G   +AW +F  MK KG SPDF+TYS FI  LC+ G
Sbjct: 919  KMEEESCEPSVVTYTAMICGYMSLGKAEEAWKVFRNMKEKGTSPDFRTYSKFINCLCQAG 978

Query: 1135 RSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKRR 1299
            +SE++L L+ EM+D GI PSTVNFRTVF+GLNREGKQDLA  VLQ+K +L ++R+
Sbjct: 979  KSEDALNLLSEMLDKGIAPSTVNFRTVFYGLNREGKQDLARIVLQKKSALAAQRK 1033



 Score =  164 bits (414), Expect = 1e-37
 Identities = 102/415 (24%), Positives = 184/415 (44%), Gaps = 33/415 (7%)
 Frame = +1

Query: 103  TMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGYKNTTETYNMAIKISG 282
            +M+E L + +  F P++  +VL+ C    H ALRFF+WV  + GY +T   YN  + I+G
Sbjct: 146  SMEERLEELSFRFEPDIVEKVLKRCFKVPHLALRFFNWVKDKEGYSHTVGVYNTMLSIAG 205

Query: 283  CAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALNKFKEMKAEGCKPSGS 462
             A+D   + +L  EM++        TW+I+I  YG+A      L  F++M+  G +P  +
Sbjct: 206  EARDLGMVDELVKEMEKNACDKDIRTWTILISVYGKATKIGKGLLVFEKMRKSGFEPDAA 265

Query: 463  TYKYLVVFLC--GR-------------------------------KGRKIDEAIRIFHEM 543
             Y  ++  LC  GR                               K  K+D    I  +M
Sbjct: 266  AYNIMIRSLCIAGRGDLALEFYKEMIGKGITFGLRTYKMLLDCTAKSEKLDIVQSIADDM 325

Query: 544  INAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXX 723
            I    + + +     L+S C + K  +A   I+ L          Y  ++          
Sbjct: 326  IRICEISEHDAFGYLLKSFCISGKIREALELIRELKNKEVGLDAKYFEILVKGLCRANRI 385

Query: 724  XXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFI 903
                        R   D  ++G ++              +++ +K+ G+ P V  YT  +
Sbjct: 386  VDALEIVDIMKKRKLDDSNVYGIIISGYLRQNDVSKALEQLEVLKKSGIIPRVSTYTEIM 445

Query: 904  VHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPS 1083
             H FK KQ +K  + F++M E G EP  V  ++++ G++     ++AW +F  M+ KG  
Sbjct: 446  QHLFKMKQFQKGCNLFREMIENGIEPDNVAITAVVAGHLGQNQVAEAWKVFSSMEEKGIK 505

Query: 1084 PDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQD 1248
            P +K+YS+F+  LC+  + +E ++L+++M  + I      F  V   + + G+++
Sbjct: 506  PTWKSYSIFVKELCRSAKYDEIVKLLNQMHASKITIRDNMFSWVISCMEKNGEKE 560


>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317055|gb|EFH47477.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1029

 Score =  455 bits (1170), Expect = e-125
 Identities = 221/415 (53%), Positives = 286/415 (68%)
 Frame = +1

Query: 55   DLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPG 234
            D+Q IC +L SS DW   QEAL K TV FTPEL +EVLRN +  G+A LRFFSWV +R G
Sbjct: 612  DVQEICHVLSSSRDWERTQEALEKLTVQFTPELVVEVLRNAKIQGNAVLRFFSWVGKRNG 671

Query: 235  YKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIAL 414
            YK+ +E YNM+IK++GC KDF+ MR L++EM+R+  +IT +TW+IMIMQYGR GLT IA+
Sbjct: 672  YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAI 731

Query: 415  NKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAEIYLQ 594
              FKEMK  G  PS ST+K L+  LC +KGR ++EA + F EMI +G VPD+EL + YL 
Sbjct: 732  RTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYLG 791

Query: 595  SLCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLD 774
             LCE     DA+ C+ SL K GF  P++YS+ I                      RS LD
Sbjct: 792  CLCEVGNTKDAKSCLDSLGKIGFPVPVAYSIYIRALSRIGKLEEALSELASFEGDRSLLD 851

Query: 775  QYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFK 954
            QY +GS+VH             KV++MK+ G+ P VHVYTS IVHFFKEKQ EK L+T  
Sbjct: 852  QYTYGSIVHGLLQRGDLHKALDKVNSMKEIGIKPGVHVYTSLIVHFFKEKQFEKVLETCH 911

Query: 955  KMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQG 1134
            KM+EE CEP++VTY+++I GYM +G   +AW  F  ++ KG SPDFKTYS FI  LC+ G
Sbjct: 912  KMKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFRNIEEKGTSPDFKTYSKFINCLCQAG 971

Query: 1135 RSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKRR 1299
            +SE++L+L+ EM+D GI PST+NFRTVF+GLNREGKQDLA  VL +K +L ++R+
Sbjct: 972  KSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKQDLARIVLHKKSALVAQRK 1026



 Score =  149 bits (377), Expect = 2e-33
 Identities = 101/432 (23%), Positives = 182/432 (42%), Gaps = 35/432 (8%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I  ++ +  +  +M++ L   +  F PE+   VL+ C    H A+RFF+WV  + G+
Sbjct: 125  VHQITSVVRADDEIVSMEDRLEILSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKLKDGF 184

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRA-------- 393
             +    YN  + I+G A++ + + +L  EM++        TW+I+I  YG+A        
Sbjct: 185  SHRVGIYNTMLSIAGEARNLDMVDELVKEMEKHACDKDIRTWTILISVYGKAKKIGKGLL 244

Query: 394  ---------------------------GLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLC 492
                                       G  ++AL  +KEM  +G      TYK L+   C
Sbjct: 245  VFEKMRKSGFELDAAAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD--C 302

Query: 493  GRKGRKIDEAIRIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTP 672
              K  K+D    I  +M+    + + +     L+S C + K  +A   I+ L        
Sbjct: 303  IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 362

Query: 673  LSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDA 852
              Y  ++                      R   D  ++G ++              + + 
Sbjct: 363  AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEI 422

Query: 853  MKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGM 1032
            +K+ G  P V  YT  +   FK KQ EK  + F +M E G EP  V  ++++ G++    
Sbjct: 423  IKKSGRPPRVSTYTEIMQQLFKLKQFEKGCNLFSEMIESGIEPDSVAITAVVAGHLGQNR 482

Query: 1033 FSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRT 1212
             ++AW +F  M+ KG  P +K+YS+F+  LC+  R +E + L ++M  + I      F  
Sbjct: 483  VAEAWKVFGSMEEKGIKPTWKSYSIFMKELCRSSRYDEIITLFNQMHASKIAIRDDIFSW 542

Query: 1213 VFHGLNREGKQD 1248
            V   + + G+++
Sbjct: 543  VISSMEKNGEKE 554


>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
            gi|482555420|gb|EOA19612.1| hypothetical protein
            CARUB_v10002874mg [Capsella rubella]
          Length = 1016

 Score =  452 bits (1162), Expect = e-124
 Identities = 217/414 (52%), Positives = 290/414 (70%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +Q IC++L SS DW   QE+L K TV FTPEL +EVLRN +  G+  LRFFSWV +R GY
Sbjct: 600  VQEICRMLSSSRDWERTQESLEKSTVEFTPELVVEVLRNAKIQGNTVLRFFSWVGKRNGY 659

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
            K+++E YNM+IK++GC KDF+ MR L++EM+R+  +IT +TW+IMIMQYGR GLT IA+ 
Sbjct: 660  KHSSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIR 719

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHVPDKELAEIYLQS 597
             FKEMK  G  PS ST+K L+  LC +KGR ++EA R F EMI +G VPD+EL + YL  
Sbjct: 720  TFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC 779

Query: 598  LCETHKFSDARRCIKSLSKCGFTTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQ 777
            LCE     DA+ C+ SL K GF+ P+ YS+ I                      +S LDQ
Sbjct: 780  LCEVGNTKDAKSCLDSLCKIGFSVPVVYSIYIRALCRIGKLEEALSELDRFKGEKSLLDQ 839

Query: 778  YIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKK 957
            Y +GS+VH             KV++MK+ G+ P+VHVYTS IVHFFKEKQ+EK ++T ++
Sbjct: 840  YTYGSIVHGFLQRGQLQEALAKVNSMKEKGIKPSVHVYTSLIVHFFKEKQLEKVIETCQE 899

Query: 958  MREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGR 1137
            M EEGCEP++VT++++I GYM++G   +AW  F  M+ KG SPDFKTYS FI  LC+ G+
Sbjct: 900  MEEEGCEPSVVTFTAMICGYMNLGKVEEAWKAFRYMEEKGTSPDFKTYSKFINCLCQAGK 959

Query: 1138 SEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKWSLRSKRR 1299
            SE++L+L+ EM+D GI PST+NFRTVF+GLNREGKQDLA  V Q+K +L ++R+
Sbjct: 960  SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKQDLARIVQQKKSALVAQRK 1013



 Score =  159 bits (402), Expect = 3e-36
 Identities = 107/446 (23%), Positives = 188/446 (42%), Gaps = 37/446 (8%)
 Frame = +1

Query: 49   EHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQR 228
            E D+  I  ++ +  D  +M++ L K    F P++   VL+ C    H A RFF WV  +
Sbjct: 117  EVDVYQITSVIRADDDVVSMEDRLEKLCFRFEPKIVENVLKRCFKVPHLARRFFDWVKDK 176

Query: 229  PGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRA----- 393
             G+ +    YN  + I+G A+D + + +L  EM++        TW+I+I  YG+A     
Sbjct: 177  DGFSHRVGIYNTMLSIAGEARDLDMVDELVKEMEKNACDKDIRTWTILISVYGKAKKIGK 236

Query: 394  ------------------------------GLTEIALNKFKEMKAEGCKPSGSTYKYLVV 483
                                          G  ++AL  +KEM  +G      TYK L+ 
Sbjct: 237  GLLVFEKMRKSGFELDAAAYDIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 296

Query: 484  FLCGRKGRKIDEAIRIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGF 663
              C  +  K+D    I  +M+    + + +     L+S C + K  +A   I+ L     
Sbjct: 297  --CITQSEKVDVVQSIVDDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEV 354

Query: 664  TTPLSYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXK 843
                 +  ++                      R   D  ++G ++              +
Sbjct: 355  CLDAKHFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNNVSKALEQ 414

Query: 844  VDAMKQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMD 1023
             + +K  G    V  YT  + H FK KQ EK  + F +M E G EP  V  ++++ GY+ 
Sbjct: 415  FEVIKNSGKTLRVSTYTEIMQHLFKLKQFEKGCNLFSEMIENGIEPDSVAITAMVAGYLG 474

Query: 1024 MGMFSDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVN 1203
                ++AWN+F  M+ KG  P +K+YS+F   LC+  + +E L+L+++M  + +      
Sbjct: 475  QNRVAEAWNVFGSMEEKGIKPTWKSYSIFAKELCRSAKYDEVLKLLNQMHTSKMAIRNDM 534

Query: 1204 FRTVFHGLNREGKQDLAHTV--LQRK 1275
            F  V   + + G+++    V  +Q+K
Sbjct: 535  FSWVISSMEKNGEKEKVELVKEIQKK 560


>ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Cucumis sativus]
            gi|449501176|ref|XP_004161299.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein At5g06400,
            mitochondrial-like [Cucumis sativus]
          Length = 1037

 Score =  452 bits (1162), Expect = e-124
 Identities = 224/427 (52%), Positives = 293/427 (68%), Gaps = 1/427 (0%)
 Frame = +1

Query: 22   MQLIPKFYNEHDLQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAAL 201
            ++ +P+ Y E DL  I KIL SS DW  +++AL  C+V F+PEL +E+LR C   G AA 
Sbjct: 608  LETLPRNYREEDLDAIYKILSSSTDWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAF 667

Query: 202  RFFSWVDQRPGYKNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQ 381
             FF+WV ++PGY +TTETYNMAIKI+G  KDF+HMR L++EM+R+   IT  TW+IMIMQ
Sbjct: 668  NFFAWVGKQPGYNHTTETYNMAIKIAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQ 727

Query: 382  YGRAGLTEIALNKFKEMKAEGCKPSGSTYKYLVVFLCGRKGRKIDEAIRIFHEMINAGHV 561
            Y RAGLTEIAL  ++EMK    KP+ +TYKYL++ LC  K RK+DEAI +F EMI++ ++
Sbjct: 728  YARAGLTEIALKSYEEMKEINIKPNANTYKYLIMSLCESKRRKVDEAITLFQEMIHSKYI 787

Query: 562  PDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPLSYSLVI-XXXXXXXXXXXXXXX 738
            PDKEL E YL  LC+  + SDA++CI  L K GF+ PL+YSL I                
Sbjct: 788  PDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIPLTYSLYIRALCRARKLDEALTLL 847

Query: 739  XXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAMKQGGVNPTVHVYTSFIVHFFK 918
                   RS LD YI+GSLV+             K+++MKQ G+NPTVHVYTSFIV+ FK
Sbjct: 848  EEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFK 907

Query: 919  EKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMFSDAWNLFHRMKLKGPSPDFKT 1098
            EKQ  +AL+   KM +EGCEP+I TYS+++ GYM+MG   +AW +F+ MK  GPSPDFK 
Sbjct: 908  EKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNYMKKYGPSPDFKA 967

Query: 1099 YSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTVFHGLNREGKQDLAHTVLQRKW 1278
            Y+M I  LCK GRSEE+L +I +M++ GI PS++NFRTV  GLNREGK  LA  VLQ+K 
Sbjct: 968  YTMLISCLCKAGRSEEALEIISDMLNNGIAPSSINFRTVIFGLNREGKHVLARDVLQQKL 1027

Query: 1279 SLRSKRR 1299
             L  +R+
Sbjct: 1028 GLIRRRK 1034



 Score =  162 bits (409), Expect = 4e-37
 Identities = 106/428 (24%), Positives = 192/428 (44%), Gaps = 34/428 (7%)
 Frame = +1

Query: 58   LQHICKILMSSMDWTTMQEALVKCTVIFTPELALEVLRNCQCHGHAALRFFSWVDQRPGY 237
            +  I  ++       +M+E L    V+F+ E+  +VL+ C    H AL FF+WV  R G+
Sbjct: 130  VHEITAVIRGGNGLVSMEERLGNLDVMFSSEIVEKVLKRCFKFPHLALGFFNWVKSRDGF 189

Query: 238  KNTTETYNMAIKISGCAKDFEHMRKLYHEMKRKRMVITSETWSIMIMQYGRAGLTEIALN 417
            + TT  +N  + I+G A+DF+ + KL  EM+   ++   +TW+I+I  YG A LT  +L 
Sbjct: 190  QCTTNVFNTVLSIAGEARDFKLIDKLLEEMESYSLLKDIKTWTILISLYGNAKLTGKSLM 249

Query: 418  KFKEMKAEGCKPSGSTYKYLVVFL---------------CGRKGRKIDE----------- 519
             + +MK  GC+P G  YK L+  L                 +KG  + +           
Sbjct: 250  VYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKMLLSSL 309

Query: 520  --------AIRIFHEMINAGHVPDKELAEIYLQSLCETHKFSDARRCIKSLSKCGFTTPL 675
                     + I  +M+   +V ++++    L+S C + +  +A   I+ L+  G     
Sbjct: 310  AGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIVLDS 369

Query: 676  SYSLVIXXXXXXXXXXXXXXXXXXXXXXRSTLDQYIFGSLVHXXXXXXXXXXXXXKVDAM 855
             Y  ++                      +  +D  I+G +++                 M
Sbjct: 370  EYFEILIGGLCRANRIEDALELINIIKRKGDVDGKIYGIIINWYLRKNEVSKALDLFQNM 429

Query: 856  KQGGVNPTVHVYTSFIVHFFKEKQIEKALDTFKKMREEGCEPTIVTYSSLIRGYMDMGMF 1035
            K+ G  PT   YT  + H F   + EK  + +K+M E+G E   V   +++ G +     
Sbjct: 430  KEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQNRI 489

Query: 1036 SDAWNLFHRMKLKGPSPDFKTYSMFIFSLCKQGRSEESLRLIDEMMDTGILPSTVNFRTV 1215
            ++AWN+F  M+ K   P +K+ S+FI  L +  R++E +++++EM +  I+     FR+V
Sbjct: 490  TEAWNVFRTMENK---PTWKSCSVFIRELFRISRTDEIVKVLNEMQELNIVIPDKLFRSV 546

Query: 1216 FHGLNREG 1239
               + + G
Sbjct: 547  VSYMEKNG 554