BLASTX nr result
ID: Sinomenium22_contig00027574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00027574
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citr... 67 3e-09
ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citr... 67 3e-09
ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase... 66 4e-09
ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase... 65 8e-09
ref|XP_002531030.1| ribulose-bisphosphate carboxylase, putative ... 65 8e-09
ref|XP_004954709.1| PREDICTED: ribulose bisphosphate carboxylase... 64 2e-08
ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase... 64 2e-08
ref|XP_006856657.1| hypothetical protein AMTR_s00054p00039660 [A... 64 2e-08
gb|AAL56980.1| ribulose 1,5-bisphosphate carboxylase small subun... 64 2e-08
ref|XP_006646894.1| PREDICTED: ribulose bisphosphate carboxylase... 64 3e-08
ref|NP_001045917.1| Os02g0152400 [Oryza sativa Japonica Group] g... 64 3e-08
gb|EYU37322.1| hypothetical protein MIMGU_mgv1a015027mg [Mimulus... 63 4e-08
gb|ADW80768.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 63 5e-08
gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis] 62 8e-08
ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase... 61 1e-07
emb|CCF55356.1| ribulose-1,5-bisphosphate carboxylase small subu... 61 1e-07
gb|ABN41481.1| putative chloroplast ribulose-1,5-bisphosphate ca... 61 1e-07
gb|ABK55670.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 1e-07
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 61 2e-07
ref|XP_004962611.1| PREDICTED: ribulose bisphosphate carboxylase... 61 2e-07
>ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|567922696|ref|XP_006453354.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556579|gb|ESR66593.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556580|gb|ESR66594.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
Length = 172
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYVHR NSRMPGYYDGRYWT+WKLPMF
Sbjct: 93 EVGYVHRENSRMPGYYDGRYWTMWKLPMF 121
>ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|568840482|ref|XP_006474196.1| PREDICTED: ribulose
bisphosphate carboxylase small chain, chloroplastic-like
[Citrus sinensis] gi|557556578|gb|ESR66592.1|
hypothetical protein CICLE_v10009532mg [Citrus
clementina]
Length = 201
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYVHR NSRMPGYYDGRYWT+WKLPMF
Sbjct: 122 EVGYVHRENSRMPGYYDGRYWTMWKLPMF 150
>ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum lycopersicum]
Length = 169
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYVHR NS+MPGYYDGRYWTLWKLPMF
Sbjct: 94 QVGYVHRENSKMPGYYDGRYWTLWKLPMF 122
>ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum tuberosum]
Length = 169
Score = 65.5 bits (158), Expect = 8e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYVHR NS MPGYYDGRYWTLWKLPMF
Sbjct: 94 QVGYVHRENSNMPGYYDGRYWTLWKLPMF 122
>ref|XP_002531030.1| ribulose-bisphosphate carboxylase, putative [Ricinus communis]
gi|223529383|gb|EEF31347.1| ribulose-bisphosphate
carboxylase, putative [Ricinus communis]
Length = 94
Score = 65.5 bits (158), Expect = 8e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -1
Query: 83 GYVHRTNSRMPGYYDGRYWTLWKLPMF 3
GYVHR NSRMPGYYDGRYWTLWKLPMF
Sbjct: 18 GYVHRENSRMPGYYDGRYWTLWKLPMF 44
>ref|XP_004954709.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Setaria italica]
Length = 185
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
K G +HR+NSRMPGYYDGRYWTLWKLPMF
Sbjct: 98 KAGEIHRSNSRMPGYYDGRYWTLWKLPMF 126
>ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 190
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYV R NSRMPGYYDGRYWTLWKLPMF
Sbjct: 109 EVGYVQRENSRMPGYYDGRYWTLWKLPMF 137
>ref|XP_006856657.1| hypothetical protein AMTR_s00054p00039660 [Amborella trichopoda]
gi|548860557|gb|ERN18124.1| hypothetical protein
AMTR_s00054p00039660 [Amborella trichopoda]
Length = 169
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
+VGYV R NSRMPGYYDGRYWTLWKLPMF
Sbjct: 93 EVGYVSRQNSRMPGYYDGRYWTLWKLPMF 121
>gb|AAL56980.1| ribulose 1,5-bisphosphate carboxylase small subunit [Larrea
tridentata]
Length = 107
Score = 63.9 bits (154), Expect = 2e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
C+ F ++ G+V+R SRMPGYYDGRYWT+WKLPMF
Sbjct: 42 CLEFSIESGFVYRETSRMPGYYDGRYWTMWKLPMF 76
>ref|XP_006646894.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Oryza brachyantha]
Length = 181
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
K G +HR+NSRMPGYYDGRYWTLWKLPMF
Sbjct: 99 KEGKIHRSNSRMPGYYDGRYWTLWKLPMF 127
>ref|NP_001045917.1| Os02g0152400 [Oryza sativa Japonica Group]
gi|51535337|dbj|BAD38596.1| putative ribulose
1,5-bisphosphate carboxylase small subunit [Oryza sativa
Japonica Group] gi|51535980|dbj|BAD38061.1| putative
ribulose 1,5-bisphosphate carboxylase small subunit
[Oryza sativa Japonica Group]
gi|113535448|dbj|BAF07831.1| Os02g0152400 [Oryza sativa
Japonica Group] gi|218190079|gb|EEC72506.1| hypothetical
protein OsI_05882 [Oryza sativa Indica Group]
gi|222622186|gb|EEE56318.1| hypothetical protein
OsJ_05407 [Oryza sativa Japonica Group]
Length = 183
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
K G +HR+NSRMPGYYDGRYWTLWKLPMF
Sbjct: 96 KEGEIHRSNSRMPGYYDGRYWTLWKLPMF 124
>gb|EYU37322.1| hypothetical protein MIMGU_mgv1a015027mg [Mimulus guttatus]
Length = 170
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
K+GYV+R NSRMP YYDGRYWTLWKLPMF
Sbjct: 93 KLGYVYRENSRMPNYYDGRYWTLWKLPMF 121
>gb|ADW80768.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Flaveria floridana]
Length = 97
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
C+ F ++ G+VHR N+R PGYYDGRYWT+WKLPMF
Sbjct: 39 CLEFELEHGFVHRENARSPGYYDGRYWTMWKLPMF 73
>gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis]
Length = 176
Score = 62.0 bits (149), Expect = 8e-08
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1
Query: 83 GYVHRTNSRMPGYYDGRYWTLWKLPMF 3
G+VHR NSR+PGYYDGRYWTLWKLPMF
Sbjct: 96 GHVHRENSRIPGYYDGRYWTLWKLPMF 122
>ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Cucumis sativus]
gi|449512849|ref|XP_004164158.1| PREDICTED: ribulose
bisphosphate carboxylase small chain, chloroplastic-like
[Cucumis sativus]
Length = 185
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
CV F + G+V+R N R PGYYDGRYWT+WKLPMF
Sbjct: 100 CVEFDIGSGFVYRENHRSPGYYDGRYWTMWKLPMF 134
>emb|CCF55356.1| ribulose-1,5-bisphosphate carboxylase small subunit [Cucumis
sativus]
Length = 185
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
CV F + G+V+R N R PGYYDGRYWT+WKLPMF
Sbjct: 100 CVEFDIGSGFVYRENHRSPGYYDGRYWTMWKLPMF 134
>gb|ABN41481.1| putative chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Cucumis sativus]
Length = 93
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
CV F + G+V+R N R PGYYDGRYWT+WKLPMF
Sbjct: 4 CVEFDIGSGFVYRENHRSPGYYDGRYWTMWKLPMF 38
>gb|ABK55670.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Cucumis sativus]
Length = 125
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
CV F + G+V+R N R PGYYDGRYWT+WKLPMF
Sbjct: 91 CVEFDIGSGFVYRENHRSPGYYDGRYWTMWKLPMF 125
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -1
Query: 107 CVFFCVKVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
C+ F ++ G+V+R N R PGYYDGRYWT+WKLPMF
Sbjct: 101 CLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMF 135
>ref|XP_004962611.1| PREDICTED: ribulose bisphosphate carboxylase small chain A,
chloroplastic-like [Setaria italica]
Length = 173
Score = 60.8 bits (146), Expect = 2e-07
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1
Query: 89 KVGYVHRTNSRMPGYYDGRYWTLWKLPMF 3
KVG+V+R N+R PGYYDGRYWT+WKLPMF
Sbjct: 90 KVGFVYRENNRSPGYYDGRYWTMWKLPMF 118