BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00027230
         (1869 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   734   0.0  
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   733   0.0  
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   718   0.0  
ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily p...   715   0.0  
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     714   0.0  
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   702   0.0  
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   701   0.0  
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   701   0.0  
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   693   0.0  
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...   686   0.0  
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   685   0.0  
ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phas...   684   0.0  
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   684   0.0  
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   681   0.0  
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   681   0.0  
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   680   0.0  
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...   669   0.0  
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   667   0.0  
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   666   0.0  

>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  734 bits (1896), Expect = 0.0
 Identities = 374/538 (69%), Positives = 416/538 (77%), Gaps = 1/538 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTI-S 185
            MA +K+KVR   +             F+ YSSSS ++                 VN + S
Sbjct: 1    MALVKSKVR--LSLLRYSLSPVSQHSFRLYSSSSEAS----EEEDEVKESGNSAVNIVLS 54

Query: 186  ETETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQISPLDSLSPAVVSLVI 365
              ETL+ EK H+LIK H RK             TI SL+FDFSQIS  DS+S A+V  VI
Sbjct: 55   SEETLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVI 114

Query: 366  EKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMRT 545
            EKCG +RHGIPF Q LAFFNW T+  EF HSPEPY EMIDLAGKVR F +AW LI LM+T
Sbjct: 115  EKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKT 174

Query: 546  RNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAVE 725
            RNVEIP+ETF+ILVRRYV+AGLAAEAVHAFNRME++GCKPD++AFSVVIS L KKRRA+E
Sbjct: 175  RNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIE 234

Query: 726  AQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVIDA 905
            AQSFFDSLK RFEPDVVVYTSLVHGWCRA NISEAERVF EMK +GIQPNVYTYSIVIDA
Sbjct: 235  AQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA 294

Query: 906  LCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPAD 1085
            LCR GQI RAHDVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMKRL CP D
Sbjct: 295  LCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD 354

Query: 1086 TITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMYA 1265
             ITYNFLIESHCRDDNLEEA+K+LN + K GC+ NAS+FNPIF CIS++ DVN AHRM+A
Sbjct: 355  AITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFA 413

Query: 1266 RMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGMG 1445
            +M  L C+PNTVTYN+LMRMFA KKS D                   TYRVLIS FCG+G
Sbjct: 414  KMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIG 473

Query: 1446 HWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            HWN AYSFFKEMIEEKCL+PSLPVYEMVLQQLRKAGQ+KKHEELVEKMV RGF +RPL
Sbjct: 474  HWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 531


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  733 bits (1891), Expect = 0.0
 Identities = 373/539 (69%), Positives = 416/539 (77%), Gaps = 1/539 (0%)
 Frame = +3

Query: 6    AMAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTI- 182
            +MA +K+KVR   +             F+ YSSSS ++                 VN + 
Sbjct: 1032 SMALVKSKVR--LSLLRYSLSPVSQHSFRLYSSSSEAS----EEEDEVKESGNSAVNIVL 1085

Query: 183  SETETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQISPLDSLSPAVVSLV 362
            S  ETL+ EK H+LIK H RK             TI SL+FDFSQIS  DS+S A+V  V
Sbjct: 1086 SSEETLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRV 1145

Query: 363  IEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMR 542
            IEKCG +RHGIPF Q LAFFNW T+  EF HSPEPY EMIDLAGKVR F +AW LI LM+
Sbjct: 1146 IEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMK 1205

Query: 543  TRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAV 722
            TRNVEIP+ETF+ILVRRYV+AGLAAEAVHAFNRME++GCKPD++AFSVVIS L KKRRA+
Sbjct: 1206 TRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAI 1265

Query: 723  EAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVID 902
            EAQSFFDSLK RFEPDVVVYTSLVHGWCRA NISEAERVF EMK +GI PNVYTYSIVID
Sbjct: 1266 EAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVID 1325

Query: 903  ALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPA 1082
            ALCR GQI RAHDVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMKRL CP 
Sbjct: 1326 ALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPP 1385

Query: 1083 DTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMY 1262
            D ITYNFLIESHCRDDNLEEA+K+LN + K GC+ NAS+FNPIF CIS++ DVN AHRM+
Sbjct: 1386 DAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMF 1444

Query: 1263 ARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGM 1442
            A+M  L C+PNTVTYN+LMRMFA KKS D                   TYRVLIS FCG+
Sbjct: 1445 AKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGI 1504

Query: 1443 GHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            GHWN AYSFFKEMIEEKCL+PSLPVYEMVLQQLRKAGQ+KKHEELVEKMV RGF +RPL
Sbjct: 1505 GHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 1563


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  718 bits (1853), Expect = 0.0
 Identities = 348/483 (72%), Positives = 396/483 (81%), Gaps = 2/483 (0%)
 Frame = +3

Query: 177  TISETETLLAEKLHTLIKDHHRKXXXXXXXXXXXD--LTIPSLAFDFSQISPLDSLSPAV 350
            T    ETL+A+  H+LIKDHHR            +   TIPSL+ DFSQ+S   S+SPAV
Sbjct: 45   TAPTEETLIADTFHSLIKDHHRNNPNPNPNPAPPNPTYTIPSLSSDFSQLSAAGSVSPAV 104

Query: 351  VSLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLI 530
            V  V+EKCGA+RHGIP  QA+AFFNW TS   F+H+PEPYNEM+DLAGKVR F +AWH+I
Sbjct: 105  VRRVLEKCGAVRHGIPVLQAVAFFNWATSREGFEHNPEPYNEMVDLAGKVRQFDLAWHVI 164

Query: 531  GLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKK 710
             LM+ RNVEI +ETFSILVRRYVRAGLAAEAVHAFNRMEE+G  PDR+AFSVVI ILCKK
Sbjct: 165  DLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRIAFSVVIGILCKK 224

Query: 711  RRAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYS 890
            RRA EAQ+FFDSLKH+FE DV++YTSLV+GWCRA NI+EAERVF EMK +GI+PNVY+YS
Sbjct: 225  RRASEAQAFFDSLKHKFEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVYSYS 284

Query: 891  IVIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRL 1070
            IVIDALCRCGQI RAHDVFAEMID GC+PNSITFNNLMRVHVKAGRTEKVLQVYNQMKRL
Sbjct: 285  IVIDALCRCGQITRAHDVFAEMIDAGCNPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRL 344

Query: 1071 SCPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGA 1250
             C AD ITYNFLIE HC+D+N+EEA KVLN M K GCSPNASTFNPIFRCI++++DVNGA
Sbjct: 345  GCNADVITYNFLIECHCKDENVEEAAKVLNLMVKKGCSPNASTFNPIFRCIAKLKDVNGA 404

Query: 1251 HRMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISL 1430
            HRMY +M  L+CK NTVTYNVLM+MFA  KS D                   TY+VLIS+
Sbjct: 405  HRMYTKMKDLDCKANTVTYNVLMQMFAESKSTDMVLKLKKEMDENEVEPNVNTYKVLISM 464

Query: 1431 FCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFAS 1610
            +C MGHWN AY FF+EMIEEKCLKPS+PVYEMVL+QLR AGQ+KKHEELVEKMV+RGF +
Sbjct: 465  YCAMGHWNNAYKFFREMIEEKCLKPSMPVYEMVLKQLRNAGQLKKHEELVEKMVDRGFVT 524

Query: 1611 RPL 1619
            RPL
Sbjct: 525  RPL 527


>ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508723238|gb|EOY15135.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 532

 Score =  715 bits (1845), Expect = 0.0
 Identities = 353/539 (65%), Positives = 414/539 (76%), Gaps = 2/539 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTISE 188
            MA  K+K+R+P +             FK YSS+ +S                  +  +S 
Sbjct: 1    MALTKSKLRFPSSISPLSQRF-----FKLYSSTPTSLRGDESEETNMSEKPK--IAALSP 53

Query: 189  TETLLAEKLHTLIKDHHRKXXXXXXXXXXX--DLTIPSLAFDFSQISPLDSLSPAVVSLV 362
             E  +AEK H+LIKDHHRK             D TIPSL+ DFS+IS + S+SP++V  V
Sbjct: 54   EEAEVAEKFHSLIKDHHRKNPNPDLNSAPPTPDFTIPSLSLDFSKISAVHSISPSLVRHV 113

Query: 363  IEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMR 542
            I+KCG +RHGIPF Q L+FFNW T+ P+F  SP+PYNEMIDLAGK+RHF +AWHLI LM+
Sbjct: 114  IDKCGGVRHGIPFLQTLSFFNWATTRPDFASSPDPYNEMIDLAGKLRHFDLAWHLIDLMK 173

Query: 543  TRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAV 722
             +NV++ IETFSIL+RRYVRAGLAAEAVHAFNRME++GC PD++AFS+VIS LCKKRRA 
Sbjct: 174  AKNVDVSIETFSILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFSIVISSLCKKRRAE 233

Query: 723  EAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVID 902
            EAQ+FFD LK  FEPDV++YTSL++GWCRA NISEAERVFKEMK +GI+PNVY+Y+IVID
Sbjct: 234  EAQTFFDKLKDNFEPDVILYTSLINGWCRARNISEAERVFKEMKMAGIKPNVYSYTIVID 293

Query: 903  ALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPA 1082
            ALCRCGQI RAHDVFAEMIDVGC PNSITFNNLMRVHVKAGRTEKVLQVYNQMKR  CPA
Sbjct: 294  ALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRCGCPA 353

Query: 1083 DTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMY 1262
            DTITYNFLIESHCRDDNL+EAIKVLN M K  C PN STFN IF+CI ++QDVN AHRMY
Sbjct: 354  DTITYNFLIESHCRDDNLDEAIKVLNLMIKKECIPNPSTFNTIFKCIEKLQDVNAAHRMY 413

Query: 1263 ARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGM 1442
            A+M  LNC+PNTVTYN+LMRMFAG KS D                   TYR+LI+++CG 
Sbjct: 414  AKMKDLNCRPNTVTYNILMRMFAGAKSTDMVLKLKKEMDENEVEPNVNTYRILITMYCGK 473

Query: 1443 GHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            GHWN AY FF EMIEEK LKPS+ +Y+MVL+QLRKA Q+KKHEELVEKMV+RGF +RPL
Sbjct: 474  GHWNNAYKFFNEMIEEKGLKPSMSLYQMVLEQLRKAEQLKKHEELVEKMVDRGFVTRPL 532


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  714 bits (1842), Expect = 0.0
 Identities = 352/539 (65%), Positives = 414/539 (76%), Gaps = 2/539 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTISE 188
            MA IK+K+R+P               F  +SSSS + L                 +++S 
Sbjct: 1    MALIKSKLRFPNLFSSPFKLQLGLYAF--FSSSSEAHLSEEDTNDNPQTGPTS--SSLSP 56

Query: 189  TETLLAEKLHTLIKDHHRKXXXXXXXXXXXD--LTIPSLAFDFSQISPLDSLSPAVVSLV 362
             ETL+A+KLH+LIK HHRK           +   TIPSL+ DFSQIS + SLSP +V  V
Sbjct: 57   EETLIADKLHSLIKGHHRKNPSPDSNPSPPNPNFTIPSLSLDFSQISAVHSLSPGIVRRV 116

Query: 363  IEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMR 542
            IEKCG +RHGIP  QALAFFNW T+      SPEPYNE++DLAGKVR F +AWH++ LM+
Sbjct: 117  IEKCGGVRHGIPVLQALAFFNWATAQDRLGQSPEPYNELVDLAGKVRQFDLAWHVLDLMK 176

Query: 543  TRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAV 722
            TRNVEI IETFSILVRRYVRAG AAEAVHAFNRM+++GCKPD++AFSVVIS LCKKRRA 
Sbjct: 177  TRNVEITIETFSILVRRYVRAGFAAEAVHAFNRMDDYGCKPDKIAFSVVISNLCKKRRAT 236

Query: 723  EAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVID 902
            EAQSFFD LK +FEPDVV+YT+L+HGWCRA NISEAE VF EMK++GI+PNVYTY+IVID
Sbjct: 237  EAQSFFDGLKDKFEPDVVLYTNLIHGWCRAGNISEAESVFSEMKKAGIKPNVYTYTIVID 296

Query: 903  ALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPA 1082
            ALCRCGQI R HDVF+EMIDVGC PN++TFNNLMRVHVKAGRT+KVLQV+NQMKRL C A
Sbjct: 297  ALCRCGQITRGHDVFSEMIDVGCQPNAVTFNNLMRVHVKAGRTQKVLQVFNQMKRLKCEA 356

Query: 1083 DTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMY 1262
            D ITYNFL++ HC+D+NL++A KVLN M K GC+PN+STFNPIFR +++++DVN AHRMY
Sbjct: 357  DVITYNFLVDCHCKDENLDDAAKVLNLMVKKGCNPNSSTFNPIFRLVAKLKDVNAAHRMY 416

Query: 1263 ARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGM 1442
            A+M +L CKPNTVTYNVLM+MFA  KS D                   TYRVLI +FCGM
Sbjct: 417  AKMKELKCKPNTVTYNVLMQMFAESKSMDMVLKLKEEMDESEVEPNVNTYRVLIVMFCGM 476

Query: 1443 GHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            GHWN AY FF+EMIEEKCLKPS PVYEMVL+QLRKAGQ+KKHEELVEKMV RGF +RPL
Sbjct: 477  GHWNNAYRFFREMIEEKCLKPSFPVYEMVLEQLRKAGQLKKHEELVEKMVARGFVTRPL 535


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
            gi|449519964|ref|XP_004167004.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  702 bits (1812), Expect = 0.0
 Identities = 349/537 (64%), Positives = 413/537 (76%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTISE 188
            MA IK+K+  P                + +SSS S +                 +  +S 
Sbjct: 1    MALIKSKLNLP---PFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSP 57

Query: 189  TETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQISPLDSLSPAVVSLVIE 368
             +  ++EK H LIK+++R+           + TI SL+ D SQIS   S+SPAVV  VIE
Sbjct: 58   EQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIE 117

Query: 369  KCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMRTR 548
            K GA+RHGIPF  ALAFFNW T+   F+HSP+PYNEMIDLAGKV+ FG+AW+LI LM+ R
Sbjct: 118  KSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKAR 177

Query: 549  NVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAVEA 728
            NVEI + TFS+LVRRYVRAGLAAEAVHAFNRME++GC  D +AFS VISILCKKRRAVEA
Sbjct: 178  NVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEA 237

Query: 729  QSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVIDAL 908
            QSFFD+LKH+FEPDV+VYTSLVHGWCRA +ISEAE VF+EMK +GI PNVYTYSIVIDAL
Sbjct: 238  QSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDAL 297

Query: 909  CRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPADT 1088
            CR GQI RAHDVFAEM+D GC+PNS+TFNNL+RVH++AGRTEKVLQVYNQMKRL C AD 
Sbjct: 298  CRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADL 357

Query: 1089 ITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMYAR 1268
            ITYNFLIE+HC+DDNL EAIKVLN MAKN C+PNAS+FNPIFRCI++ QDVNGAHRM+AR
Sbjct: 358  ITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFAR 417

Query: 1269 MNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGMGH 1448
            M ++ CKPNTVTYN+LMRMFA  KSAD                   TYR LI+L+CGMGH
Sbjct: 418  MKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGH 477

Query: 1449 WNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            WN AY FF+EMI+EKC+KPS+P+Y+MVL++LRKAGQ+KKHEELV+KMVERGFASR L
Sbjct: 478  WNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  701 bits (1809), Expect = 0.0
 Identities = 352/542 (64%), Positives = 408/542 (75%), Gaps = 5/542 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNT--I 182
            MA IK+  R PF+              K YS  SS A                  +T  +
Sbjct: 5    MALIKSNHRLPFSLSQQIP--------KAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFL 56

Query: 183  SETETLLAEKLHTLIKDHHRKXXXXXXXXXXX---DLTIPSLAFDFSQISPLDSLSPAVV 353
            S  ETL++EK H+LIKDHHRK              D TIPSL+  FSQIS   S+SP+ V
Sbjct: 57   SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTV 116

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
              VIEK   +RHGIP  Q L+FFNW+T+ PEF HSP+ Y+EMI+LAGKVR F +AWH I 
Sbjct: 117  RHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID 176

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++RNVEI ++TFSILVRRYVRAGLAAEAVHAFNRMEE+GC PD++AFS+VISILC+KR
Sbjct: 177  LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 236

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFFDSLK +FEPDV+VYT+LV GWCRA NISEAERVF+EMK +GIQPNVYTYSI
Sbjct: 237  RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 296

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VIDALCRCGQI RAHDVFAEM++VGC PNSITFNNLMRVHVKA RTEKVLQVYNQMKRL 
Sbjct: 297  VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 356

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C ADTITYNFLI+ HC+D  LE+AIKVLN M + GC+PNASTFN IFRCIS++ DVNGAH
Sbjct: 357  CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 416

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY +M  L C+PNTVTYN+LM+MFA  KS D                   TYR+LI+++
Sbjct: 417  RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 476

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY + +EMIEEKCLKP   VYEMVLQQLR+AGQ++KHEELVEKMV+RGF +R
Sbjct: 477  CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 536

Query: 1614 PL 1619
            PL
Sbjct: 537  PL 538


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
            gi|557537379|gb|ESR48497.1| hypothetical protein
            CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  701 bits (1809), Expect = 0.0
 Identities = 352/542 (64%), Positives = 408/542 (75%), Gaps = 5/542 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNT--I 182
            MA IK+  R PF+              K YS  SS A                  +T  +
Sbjct: 8    MALIKSNHRLPFSLSQQIP--------KAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFL 59

Query: 183  SETETLLAEKLHTLIKDHHRKXXXXXXXXXXX---DLTIPSLAFDFSQISPLDSLSPAVV 353
            S  ETL++EK H+LIKDHHRK              D TIPSL+  FSQIS   S+SP+ V
Sbjct: 60   SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTV 119

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
              VIEK   +RHGIP  Q L+FFNW+T+ PEF HSP+ Y+EMI+LAGKVR F +AWH I 
Sbjct: 120  RHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID 179

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++RNVEI ++TFSILVRRYVRAGLAAEAVHAFNRMEE+GC PD++AFS+VISILC+KR
Sbjct: 180  LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 239

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFFDSLK +FEPDV+VYT+LV GWCRA NISEAERVF+EMK +GIQPNVYTYSI
Sbjct: 240  RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 299

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VIDALCRCGQI RAHDVFAEM++VGC PNSITFNNLMRVHVKA RTEKVLQVYNQMKRL 
Sbjct: 300  VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 359

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C ADTITYNFLI+ HC+D  LE+AIKVLN M + GC+PNASTFN IFRCIS++ DVNGAH
Sbjct: 360  CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 419

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY +M  L C+PNTVTYN+LM+MFA  KS D                   TYR+LI+++
Sbjct: 420  RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 479

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY + +EMIEEKCLKP   VYEMVLQQLR+AGQ++KHEELVEKMV+RGF +R
Sbjct: 480  CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 539

Query: 1614 PL 1619
            PL
Sbjct: 540  PL 541


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  693 bits (1789), Expect = 0.0
 Identities = 347/537 (64%), Positives = 403/537 (75%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSSSSSALXXXXXXXXXXXXXXXGVNTISE 188
            MAAIKA +R P                   +SSSSS++                  ++S 
Sbjct: 1    MAAIKASLRVPAPLSHLSPTFLRSFSSSITTSSSSSSIISQSQHLEEDYINP----SLSF 56

Query: 189  TETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQISPLDSLSPAVVSLVIE 368
             ET LA K H+LIKDHHR+                SL+ DFS  S    +SP++VS VIE
Sbjct: 57   EETTLANKFHSLIKDHHRRNPNFSLPNTPSH----SLSLDFSHFST-SPVSPSLVSHVIE 111

Query: 369  KCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMRTR 548
            KC A+RHGIPF QAL+FFNW TS P F H PEPYNEMIDLAGKVR+F + W +I LM+ R
Sbjct: 112  KCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKAR 171

Query: 549  NVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAVEA 728
            NVEI IETFSIL+RRYVRAGLA+EAVHAFNRME++ CKPD++AFS++ISILC+KRRA EA
Sbjct: 172  NVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEA 231

Query: 729  QSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVIDAL 908
            QSFFDSLK +FEPDV+VYT+LV GWCRA NI EAERVF EMK +G  PNVYTY+IVIDAL
Sbjct: 232  QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDAL 291

Query: 909  CRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPADT 1088
            CRCGQI RAHDVFAEM+DVGC PNSITFNNL+RVHVKAGRTEKVLQVYNQMKR+ CP DT
Sbjct: 292  CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDT 351

Query: 1089 ITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMYAR 1268
            +TYNFLIESHC+D NL+EA+KVLN M K GCSPNASTFN +F  I++++DVNGAHR+YA+
Sbjct: 352  VTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAK 411

Query: 1269 MNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGMGH 1448
            M +L CK NTVTYN+LMRMF   KS D                   TY VLI+++CGMGH
Sbjct: 412  MKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGH 471

Query: 1449 WNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            WN AY FF+EM+EEKCLKPSLPVYE VLQQLRKAGQ+KKHEELV  MV+RGFA+RPL
Sbjct: 472  WNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATRPL 528


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score =  686 bits (1771), Expect = 0.0
 Identities = 332/483 (68%), Positives = 394/483 (81%), Gaps = 5/483 (1%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXXD--LTIPSLAFDFSQISPLDSLSPAVV 353
            +SE E  +AEK+H+LIKDHHRK           +  +T P+L+FDFS IS   S+SP VV
Sbjct: 66   LSEEEAQIAEKIHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 125

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWIT---SFPEFQHSPEPYNEMIDLAGKVRHFGIAWH 524
            S VIEKCG++RHGIPF+QALAFFNW     S   F + PEPYNEMIDLAGKVR F +AWH
Sbjct: 126  SRVIEKCGSVRHGIPFSQALAFFNWAAVRDSCGSFLN-PEPYNEMIDLAGKVRQFDVAWH 184

Query: 525  LIGLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILC 704
            LI  M+ +N++IPIETFSIL+RRYVRAGLA+EAVH FNRME++ CKPDR AFS+VI ILC
Sbjct: 185  LIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSIVIGILC 244

Query: 705  KKRRAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYT 884
            KKRRA EAQSFFDSLK +FE DVV+YTSLVHGWCRA NISEAER+F++MK++G+QPNVYT
Sbjct: 245  KKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYT 304

Query: 885  YSIVIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMK 1064
            YSIVIDALCR GQ  RA+DVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMK
Sbjct: 305  YSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 364

Query: 1065 RLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVN 1244
            RLSC  D ITYNFLI++HCRD+N +EA+KV+N MAK  C PNASTFNPIFRCI++ +DVN
Sbjct: 365  RLSCSPDVITYNFLIDAHCRDENRDEALKVVNVMAKKRCEPNASTFNPIFRCIAKARDVN 424

Query: 1245 GAHRMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLI 1424
             AHR+YA+M +LNCKPNTVT N+LM+MF   KS D                   T+++LI
Sbjct: 425  AAHRLYAKMKELNCKPNTVTCNILMKMFVESKSTDMVIKLRKEMDENEVEPNVNTFKILI 484

Query: 1425 SLFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGF 1604
            S++CGMGHWN AY +F+EMIEEKCL+PS  VY+MVL+QLRKAGQ++KHEELVEKMV+RGF
Sbjct: 485  SMYCGMGHWNNAYKYFREMIEEKCLRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGF 544

Query: 1605 ASR 1613
            A+R
Sbjct: 545  ATR 547



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 39/177 (22%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
 Frame = +3

Query: 468 YNEMIDLAGKVRHFGIAWHLIGLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRME 647
           YN +ID   +  +   A  ++ +M  +  E    TF+ + R   +A     A   + +M+
Sbjct: 375 YNFLIDAHCRDENRDEALKVVNVMAKKRCEPNASTFNPIFRCIAKARDVNAAHRLYAKMK 434

Query: 648 EFGCKPDRVAFSVVISILCKKRRA---VEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASN 818
           E  CKP+ V  ++++ +  + +     ++ +   D  ++  EP+V  +  L+  +C   +
Sbjct: 435 ELNCKPNTVTCNILMKMFVESKSTDMVIKLRKEMD--ENEVEPNVNTFKILISMYCGMGH 492

Query: 819 ISEAERVFKEM-KESGIQPNVYTYSIVIDALCRCGQINRAHDVFAEMIDVGCSPNSI 986
            + A + F+EM +E  ++P+   Y +V+  L + GQ+ +  ++  +M+D G +  S+
Sbjct: 493 WNNAYKYFREMIEEKCLRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGFATRSV 549


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  685 bits (1767), Expect = 0.0
 Identities = 329/482 (68%), Positives = 393/482 (81%), Gaps = 4/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXXD--LTIPSLAFDFSQISPLDSLSPAVV 353
            +S+ E  +AEK H+LIKDHHRK           +  +T P+L+FDFS IS   S+SP VV
Sbjct: 60   LSKEEAQIAEKFHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 119

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQH--SPEPYNEMIDLAGKVRHFGIAWHL 527
            S VIEKCG++RHGIPF+QALAFFNW  +        +PEPYNEMIDLAGKVR F +AWHL
Sbjct: 120  SRVIEKCGSVRHGIPFSQALAFFNWAAARDSCGSFLNPEPYNEMIDLAGKVRQFDVAWHL 179

Query: 528  IGLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCK 707
            I  M+ +N++IPIETFSIL+RRYVRAGLA+EAVH FNRME++ CKPDR AFSVV+ ILCK
Sbjct: 180  IDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSVVVGILCK 239

Query: 708  KRRAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTY 887
            KRRA EAQSFFDSLK +FE DVV+YTSLVHGWCRA NISEAER+F++MK++G+QPNVYTY
Sbjct: 240  KRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTY 299

Query: 888  SIVIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKR 1067
            SIVIDALCR GQ  RA+DVF+EMIDVGC PN+ITFNNLMRVHVKAGRTEKVLQVYNQMKR
Sbjct: 300  SIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMKR 359

Query: 1068 LSCPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNG 1247
            LSC  D ITYNFLI++ CRD+N +EA+KV+N MAK GC PNASTFNPIFRCI++ +DVN 
Sbjct: 360  LSCDPDVITYNFLIDARCRDENRDEALKVVNVMAKKGCEPNASTFNPIFRCIAKARDVNA 419

Query: 1248 AHRMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLIS 1427
            AHR+YA+M +LNCKPNTVT N+LM+MFA  KS D                   T+++LIS
Sbjct: 420  AHRLYAKMKELNCKPNTVTCNILMKMFAESKSTDMVFKIKNEMDENEVEPNVNTFKILIS 479

Query: 1428 LFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFA 1607
            ++CGMGHWN AY +F+EMIEE+CL+PS  VY+MVL+QLRKAGQ++KHEELVEKMV+RGFA
Sbjct: 480  MYCGMGHWNNAYKYFREMIEERCLRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGFA 539

Query: 1608 SR 1613
            +R
Sbjct: 540  TR 541



 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 38/175 (21%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
 Frame = +3

Query: 468 YNEMIDLAGKVRHFGIAWHLIGLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRME 647
           YN +ID   +  +   A  ++ +M  +  E    TF+ + R   +A     A   + +M+
Sbjct: 369 YNFLIDARCRDENRDEALKVVNVMAKKGCEPNASTFNPIFRCIAKARDVNAAHRLYAKMK 428

Query: 648 EFGCKPDRVAFSVVISILCKKRRAVEAQSFFDSL-KHRFEPDVVVYTSLVHGWCRASNIS 824
           E  CKP+ V  ++++ +  + +         + + ++  EP+V  +  L+  +C   + +
Sbjct: 429 ELNCKPNTVTCNILMKMFAESKSTDMVFKIKNEMDENEVEPNVNTFKILISMYCGMGHWN 488

Query: 825 EAERVFKEM-KESGIQPNVYTYSIVIDALCRCGQINRAHDVFAEMIDVGCSPNSI 986
            A + F+EM +E  ++P+   Y +V+  L + GQ+ +  ++  +M+D G +  S+
Sbjct: 489 NAYKYFREMIEERCLRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGFATRSV 543


>ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
            gi|561009211|gb|ESW08118.1| hypothetical protein
            PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  684 bits (1766), Expect = 0.0
 Identities = 329/482 (68%), Positives = 386/482 (80%), Gaps = 2/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX--DLTIPSLAFDFSQISPLDSLSPAVV 353
            +S  ET LA+KLH  IKDHHR+             +L IP L+ DFS +S   +LSPAV 
Sbjct: 49   LSPEETTLADKLHAAIKDHHRRNPSPNPNAAPPTPNLAIPDLSLDFSALSAAQTLSPAVA 108

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
              VIEKCGA+RHGIP  Q+LAFFNW TS   F  SPEPY+EM+DLAGK+RHF +AWH+I 
Sbjct: 109  RRVIEKCGAVRHGIPLFQSLAFFNWATSLDGFPPSPEPYDEMLDLAGKLRHFDLAWHVID 168

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM+TR VEI + TFS LVRRYVRAGLAAEAVHAFNRME++GC PD+VAFS+VIS LCKKR
Sbjct: 169  LMKTRGVEISVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDKVAFSIVISSLCKKR 228

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFF+SLKH+FEPDV+VYTSLV+GWCRA NIS+AE VF +MK +GI+PNVYTYSI
Sbjct: 229  RANEAQSFFESLKHKFEPDVLVYTSLVYGWCRAGNISKAEEVFSDMKMAGIKPNVYTYSI 288

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VID+LCRCGQI RAHDVFAEMID GC PN++TFN+LMRVHVKAGRTEKVLQV+NQMKRL 
Sbjct: 289  VIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMRVHVKAGRTEKVLQVHNQMKRLG 348

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            CPADTI+YNF+IESHCRD+NL+EA+K+LN M K G +PNASTFN +F CI+++ DVNGAH
Sbjct: 349  CPADTISYNFIIESHCRDENLDEAVKILNLMVKKGVAPNASTFNCVFGCIAKLHDVNGAH 408

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMYARM +L C+PNT+TYN+LMRMFA  KS D                   TYR+LIS+F
Sbjct: 409  RMYARMKELKCQPNTLTYNILMRMFAESKSTDMVLKMKKEMDENQVEPNVNTYRILISMF 468

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            C M HWN AY   KEM+EEKCL+P+L VYE VL+ LR AGQ+KKHEELV+KMV RGF +R
Sbjct: 469  CEMKHWNNAYKLVKEMVEEKCLRPNLSVYETVLELLRNAGQLKKHEELVDKMVARGFVTR 528

Query: 1614 PL 1619
            PL
Sbjct: 529  PL 530


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571458531|ref|XP_006581147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  684 bits (1765), Expect = 0.0
 Identities = 336/513 (65%), Positives = 393/513 (76%), Gaps = 2/513 (0%)
 Frame = +3

Query: 87   FKPYSSSSSSALXXXXXXXXXXXXXXXGVNTISETETLLAEKLHTLIKDHHRKXXXXXXX 266
            FKPYSSS+S+ +                   +S  ET LA+K H  IK+HHR+       
Sbjct: 57   FKPYSSSASALVPELDIQPDTPQNP-----NLSPEETTLADKFHAAIKEHHRRNPTPNPN 111

Query: 267  XXXX--DLTIPSLAFDFSQISPLDSLSPAVVSLVIEKCGALRHGIPFAQALAFFNWITSF 440
                  +LTIP L+  FS IS    +SP+V   VIEKCG +RHGIPF Q+LAFFNW +S 
Sbjct: 112  APPPTPNLTIPDLSLAFSAISAAHPISPSVAHRVIEKCGGVRHGIPFLQSLAFFNWSSSL 171

Query: 441  PEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLMRTRNVEIPIETFSILVRRYVRAGLAAE 620
              F  SPEPYNEM+DLAGK+R F +AWH+I LM++R VEI + TFS LVRRYVRAGLAAE
Sbjct: 172  DGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAE 231

Query: 621  AVHAFNRMEEFGCKPDRVAFSVVISILCKKRRAVEAQSFFDSLKHRFEPDVVVYTSLVHG 800
            AVHAFNRME++GC PD VAFS+VIS LCKKRRA EAQSFFDSLKHRFEPDVVVYTSLVHG
Sbjct: 232  AVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHG 291

Query: 801  WCRASNISEAERVFKEMKESGIQPNVYTYSIVIDALCRCGQINRAHDVFAEMIDVGCSPN 980
            WCRA +IS+AE VF +MK +GI+PNVYTYSIVID+LCRCGQI RAHDVF+EMID GC PN
Sbjct: 292  WCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPN 351

Query: 981  SITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLN 1160
            ++TFN+LMRVHVKAGRTEKVL+VYNQMKRL CPADTI+YNF+IESHCRD+NLEEA K+LN
Sbjct: 352  AVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILN 411

Query: 1161 QMAKNGCSPNASTFNPIFRCISEMQDVNGAHRMYARMNQLNCKPNTVTYNVLMRMFAGKK 1340
             M K G +PNASTFN IF CI+++ DVNGAHRMYARM +LNC+PNT+TYN+LMRMFA  +
Sbjct: 412  LMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESR 471

Query: 1341 SADXXXXXXXXXXXXXXXXXXXTYRVLISLFCGMGHWNRAYSFFKEMIEEKCLKPSLPVY 1520
            S D                   TYR+LIS+FC M HWN AY    EM+EEKCL+P+L VY
Sbjct: 472  STDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVY 531

Query: 1521 EMVLQQLRKAGQMKKHEELVEKMVERGFASRPL 1619
            E VL+ LRKAGQ+KKHEELV+KMV RGF +RPL
Sbjct: 532  ETVLELLRKAGQLKKHEELVDKMVARGFVTRPL 564


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
            gi|550339796|gb|EEE94747.2| hypothetical protein
            POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  681 bits (1757), Expect = 0.0
 Identities = 336/542 (61%), Positives = 407/542 (75%), Gaps = 5/542 (0%)
 Frame = +3

Query: 9    MAAIKAKVRYPFAXXXXXXXXXXXXRFKPYSSS----SSSALXXXXXXXXXXXXXXXGVN 176
            MA +K K+R+P +              KP+SSS    S S L                  
Sbjct: 1    MALLKTKLRFPHSLSPHL--------LKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKT 52

Query: 177  TISETETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQ-ISPLDSLSPAVV 353
             +S  ET +AEKLH+LIKDH+R              TIPSL+ DFSQ IS + S+SP+++
Sbjct: 53   PLSPEETSVAEKLHSLIKDHYRNNPNKTLPPDPT-YTIPSLSLDFSQTISTVHSISPSII 111

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
              VIE+ G +RHGIP  Q LAFFNW +    F  SPE +NEM+D AGKVR F +AWH+I 
Sbjct: 112  RHVIEQSGGVRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVID 171

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM+ R+VEI +ETFSIL+RRYVRAGLAAEA+HAFNRME++ CKPD++AFS++ISILC+KR
Sbjct: 172  LMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKR 231

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQ FFDSLK +FEPDV+VYT+LV GWCRA NISEAERVF EMK +GI+PNVYTYSI
Sbjct: 232  RASEAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSI 291

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VID+LCRCGQI RAHD+FAEM+D GC PNSIT+N+LMR+HVKAGRTEKVLQVYNQMKRL 
Sbjct: 292  VIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG 351

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C  DT+TYNFLIE+HC+D+NLE+AIKV+  MAK GC+PNASTFN +F CI+++ DVN AH
Sbjct: 352  CEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAH 411

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY +M +LNC+ NTVTYN LM+MF   KS D                   TY+VLI+++
Sbjct: 412  RMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMY 471

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY FF+EMI+EKCL+PSLPVY+MVLQQLRKAGQ+KKHEELVEKMV+RGF +R
Sbjct: 472  CGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGFVTR 531

Query: 1614 PL 1619
            PL
Sbjct: 532  PL 533


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
            gi|482574795|gb|EOA38982.1| hypothetical protein
            CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  681 bits (1757), Expect = 0.0
 Identities = 330/482 (68%), Positives = 388/482 (80%), Gaps = 2/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX-DLTIPSLAFDFSQISPLDSLSPAVVS 356
            ++  +T  AEKLH++IKDH+RK             LT+PSL+ DFSQI     +SP+VV 
Sbjct: 52   LTPADTQTAEKLHSIIKDHYRKNPTSSNDAVLNPSLTLPSLSLDFSQIEA-SRISPSVVQ 110

Query: 357  LVIEKCGALRHGIPFAQALAFFNWITSFPEF-QHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
             VIEKCG +RHGIP  Q+L+FFNW TS  E+ Q SP PYNEMIDLAGKVR F +AWHLI 
Sbjct: 111  CVIEKCGGVRHGIPLHQSLSFFNWATSRDEYDQKSPHPYNEMIDLAGKVRQFDLAWHLID 170

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++RNVEI IETF+IL++RYVRAGLA+EAVH FNRME++GC PD++AFS+VISIL +KR
Sbjct: 171  LMKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILSRKR 230

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFFDSLK RFEPDV+VYT+LV GWCRA  ISEAERVFKEMK +GI+PNVYTYSI
Sbjct: 231  RATEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAERVFKEMKLAGIEPNVYTYSI 290

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VIDALCRCGQI+RAHDVFA+M+D GC+PN+ITFNNLMRVHVKAGRTEKVLQVYNQMK+L 
Sbjct: 291  VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 350

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C  DTITYNFLIE+HCRD+NLE A+KVLN M K  C  NASTFN IFR I + +DVNGAH
Sbjct: 351  CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKNCDVNASTFNTIFRYIEKKRDVNGAH 410

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY++M +  C+PNTVTYN+LMRMFAG KS D                   TYR+L+++F
Sbjct: 411  RMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKEMEDKEVEPNVNTYRLLVTMF 470

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY  FKEM+EEKCL PSL +YEMVL QLRKAGQ+KKHEELVEKM+++G  +R
Sbjct: 471  CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLSQLRKAGQLKKHEELVEKMIQKGLVAR 530

Query: 1614 PL 1619
            PL
Sbjct: 531  PL 532


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492879|gb|AES74082.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  680 bits (1754), Expect = 0.0
 Identities = 321/481 (66%), Positives = 386/481 (80%), Gaps = 1/481 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXXDLTIPSLAFDFSQISPLDSLSPAVVSL 359
            +S  +T + +K HT+IKDH+RK           +L+IP L+ +FS+IS + S+SP++   
Sbjct: 50   LSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLNLSIPDLSIEFSKISTVYSVSPSITRR 109

Query: 360  VIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIGLM 539
             IEKC  +RHGIPF Q+LAFFNW T+   F  SPEPYNEMIDLAGK+RHF +AWHLI LM
Sbjct: 110  AIEKCSGVRHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLM 169

Query: 540  RTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKRRA 719
            ++R V I + TFS+LVRRYVRAGLAAEAVHAFNRME++GCKPD+V+FS+VIS LCKKRRA
Sbjct: 170  KSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRA 229

Query: 720  VEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSIVI 899
             EA+ FFDSLKH+FEPDV+VYTSLVHGWCRA +I++AE VF +MKE+G++PNVYTYSIVI
Sbjct: 230  SEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVI 289

Query: 900  DALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCP 1079
            D+LCRCGQI RAHDVF+EMID GC PN++TFN+LMRVHVKAGRTEKVLQVYNQMKRL C 
Sbjct: 290  DSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCA 349

Query: 1080 ADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAHRM 1259
            ADTI+YNFLIESHC+D+NL+EA+KVL+ M K G +PNASTFN IF CI+E+ DVNGAHRM
Sbjct: 350  ADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRM 409

Query: 1260 YARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLFCG 1439
            YA+M +L C PNT+TYN+LMRMFA  KS D                   TYR+LI +FC 
Sbjct: 410  YAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCE 469

Query: 1440 MGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFAS-RP 1616
             GHWN AY+  KEM+EEKCLKP+L +YE VL+ LR AGQ+KKHEELVEKMV RGF S RP
Sbjct: 470  KGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSPRP 529

Query: 1617 L 1619
            L
Sbjct: 530  L 530


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  674 bits (1740), Expect = 0.0
 Identities = 323/482 (67%), Positives = 383/482 (79%), Gaps = 2/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX--DLTIPSLAFDFSQISPLDSLSPAVV 353
            +S  E+ + +K HT IKDH+ K             +L+IP L+ DF++IS + S+SP++ 
Sbjct: 49   LSPEESQIVDKFHTAIKDHYSKNPNPNPNPLPPSLNLSIPDLSIDFTKISTVHSISPSIA 108

Query: 354  SLVIEKCGALRHGIPFAQALAFFNWITSFPEFQHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
              VIEKCG +RHG PF Q LAFFN+ T+   F  SPEPYNEMIDLAGK+RHF +AW+LI 
Sbjct: 109  RRVIEKCGGVRHGNPFLQTLAFFNYATTLEGFPSSPEPYNEMIDLAGKLRHFELAWNLID 168

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++R V+I + TF++LVRRYVRAGLAAEAVHAFNRMEE+GC PD+VAFS+VIS LCKKR
Sbjct: 169  LMKSRGVKITVGTFAVLVRRYVRAGLAAEAVHAFNRMEEYGCTPDKVAFSIVISSLCKKR 228

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQ FFDSLKHRFEPDV+VYTSLVHGWCRA NIS+AE VF +MK +GI+PNVYTYSI
Sbjct: 229  RASEAQLFFDSLKHRFEPDVIVYTSLVHGWCRAGNISKAEEVFSDMKVAGIKPNVYTYSI 288

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VID+LCR GQI RAHDVF+EMID GC PN++TFN+LMRVHVKAGRTEKVLQVYNQMKRL 
Sbjct: 289  VIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLG 348

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C ADTI+YNF+IESHC+D+NL+EA+KVL+ M K G  PNASTFN IF CI+E+ DVNGAH
Sbjct: 349  CAADTISYNFIIESHCKDENLDEAVKVLDTMVKKGVDPNASTFNSIFGCIAELHDVNGAH 408

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMYA+M +L C+PNT+TYN+LMRMF   KS D                   TYR+LI +F
Sbjct: 409  RMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVLKLKKEMDESQVEPNVNTYRILILMF 468

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            C  GHWN AY   KEM+EEKCLKP+L +YEMVL+QLRKAGQ+KKHEELVEKMV RGF SR
Sbjct: 469  CEKGHWNNAYKLMKEMVEEKCLKPNLSIYEMVLEQLRKAGQLKKHEELVEKMVARGFVSR 528

Query: 1614 PL 1619
            PL
Sbjct: 529  PL 530


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
            gi|557094185|gb|ESQ34767.1| hypothetical protein
            EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score =  669 bits (1725), Expect = 0.0
 Identities = 328/485 (67%), Positives = 385/485 (79%), Gaps = 2/485 (0%)
 Frame = +3

Query: 171  VNTISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX-DLTIPSLAFDFSQISPLDSLSPA 347
            V T  +T+T+  EK H++IKDH+RK              T+PSL+ DFSQI     +SP+
Sbjct: 53   VLTPEDTQTI--EKFHSIIKDHYRKNPTNPNDAVLNPSFTLPSLSLDFSQIDA-SRISPS 109

Query: 348  VVSLVIEKCGALRHGIPFAQALAFFNWITSFPEF-QHSPEPYNEMIDLAGKVRHFGIAWH 524
            VV  VIEKCG +RHGIP  Q+LAFFNW TS  E+ Q SP PYNEMIDLAGKVRHF +AWH
Sbjct: 110  VVRCVIEKCGGVRHGIPLLQSLAFFNWATSRDEYDQKSPHPYNEMIDLAGKVRHFDLAWH 169

Query: 525  LIGLMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILC 704
            LI LM++RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME++GC PD++AFS+VISIL 
Sbjct: 170  LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILS 229

Query: 705  KKRRAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYT 884
            +KRRA EAQSFFDSLK +FEPDV+VYT+LV GWCRA  ISEAERVFKEMK +GI+PNVYT
Sbjct: 230  RKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGEISEAERVFKEMKVAGIEPNVYT 289

Query: 885  YSIVIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMK 1064
            YSIVIDALCRCGQI+RAHDVFA+MID GC+PN+ITFNNLMR HVKAGRTEKVLQVYNQMK
Sbjct: 290  YSIVIDALCRCGQISRAHDVFADMIDCGCAPNAITFNNLMRAHVKAGRTEKVLQVYNQMK 349

Query: 1065 RLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVN 1244
            +L C ADTITYNFLIE+HCRD NLE A+KVLN M K  C  NASTFN IFR I + +DVN
Sbjct: 350  KLGCEADTITYNFLIETHCRDGNLENAVKVLNSMIKKRCEVNASTFNTIFRYIEKKRDVN 409

Query: 1245 GAHRMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLI 1424
            GAHRMY++M +  C+ NTVTYN+LMRMF   KS D                   TYR+L+
Sbjct: 410  GAHRMYSKMMEAKCEANTVTYNILMRMFVESKSTDMVLKMKKEMDEKEVEPNVNTYRLLV 469

Query: 1425 SLFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGF 1604
            +++CGMGHW+ AY FF+EM+EEKCL PSL +YEMVL QLRKAGQ+KKHEELVEKM+ +G 
Sbjct: 470  TMYCGMGHWSNAYKFFREMVEEKCLIPSLSLYEMVLAQLRKAGQLKKHEELVEKMIHKGL 529

Query: 1605 ASRPL 1619
             +RPL
Sbjct: 530  VARPL 534


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297336219|gb|EFH66636.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 537

 Score =  667 bits (1720), Expect = 0.0
 Identities = 323/482 (67%), Positives = 385/482 (79%), Gaps = 2/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX-DLTIPSLAFDFSQISPLDSLSPAVVS 356
            ++  +T   EK H++IKDH+RK             LT+P+L+ DFSQI     +SP+VV 
Sbjct: 57   LTPEDTQTVEKFHSIIKDHYRKNPTNPNDAVLNPSLTLPALSLDFSQIDA-SRISPSVVR 115

Query: 357  LVIEKCGALRHGIPFAQALAFFNWITSFPEF-QHSPEPYNEMIDLAGKVRHFGIAWHLIG 533
             VIEKCG++RHGIP  Q+LAFFNW TS  ++ Q SP PYNEMIDLAGKVR F +AWHLI 
Sbjct: 116  CVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLID 175

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME++GC PD++AFS+VIS L +KR
Sbjct: 176  LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKR 235

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFFDSLK RFEPDV+VYT+LV GWCRA  ISEAE+VFK+MK +GI+PNVYTYSI
Sbjct: 236  RASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSI 295

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VIDALCRCGQI+RAHDVFA+M+D GC+PN+ITFNNLMRVHVKAGR EKVLQVYNQMK+L 
Sbjct: 296  VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLG 355

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C  DTITYNFLIE+HCRD+NLE A+KVLN M K  C  NASTFN IFR I + +DVNGAH
Sbjct: 356  CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY++M +  C+PNTVTYN+LMRMFAG KS D                   TYR+L+++F
Sbjct: 416  RMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMF 475

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY  FKEM+EEKCL PSL +YEMVL QLR+AGQ+KKHEELVEKM+++G  +R
Sbjct: 476  CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVTR 535

Query: 1614 PL 1619
            PL
Sbjct: 536  PL 537


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g20300, mitochondrial; Flags: Precursor
            gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
            to a hypothetical protein T3P18.15 gi|5454201 from
            Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
            multiple PPR PF|01535 repeats [Arabidopsis thaliana]
            gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
            [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
            At1g20300/F14O10_8 [Arabidopsis thaliana]
            gi|332191838|gb|AEE29959.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  666 bits (1718), Expect = 0.0
 Identities = 322/482 (66%), Positives = 384/482 (79%), Gaps = 2/482 (0%)
 Frame = +3

Query: 180  ISETETLLAEKLHTLIKDHHRKXXXXXXXXXXX-DLTIPSLAFDFSQISPLDSLSPAVVS 356
            ++  +T   EK H++IKDH+RK             LT+ +L+ DFSQI     +SP+VV 
Sbjct: 57   LTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIET-SQVSPSVVR 115

Query: 357  LVIEKCGALRHGIPFAQALAFFNWITSFPEFQH-SPEPYNEMIDLAGKVRHFGIAWHLIG 533
             VIEKCG++RHGIP  Q+LAFFNW TS  ++ H SP PYNEMIDL+GKVR F +AWHLI 
Sbjct: 116  CVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLID 175

Query: 534  LMRTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEFGCKPDRVAFSVVISILCKKR 713
            LM++RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME++GC PD++AFS+VIS L +KR
Sbjct: 176  LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR 235

Query: 714  RAVEAQSFFDSLKHRFEPDVVVYTSLVHGWCRASNISEAERVFKEMKESGIQPNVYTYSI 893
            RA EAQSFFDSLK RFEPDV+VYT+LV GWCRA  ISEAE+VFKEMK +GI+PNVYTYSI
Sbjct: 236  RASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295

Query: 894  VIDALCRCGQINRAHDVFAEMIDVGCSPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLS 1073
            VIDALCRCGQI+RAHDVFA+M+D GC+PN+ITFNNLMRVHVKAGRTEKVLQVYNQMK+L 
Sbjct: 296  VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355

Query: 1074 CPADTITYNFLIESHCRDDNLEEAIKVLNQMAKNGCSPNASTFNPIFRCISEMQDVNGAH 1253
            C  DTITYNFLIE+HCRD+NLE A+KVLN M K  C  NASTFN IFR I + +DVNGAH
Sbjct: 356  CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415

Query: 1254 RMYARMNQLNCKPNTVTYNVLMRMFAGKKSADXXXXXXXXXXXXXXXXXXXTYRVLISLF 1433
            RMY++M +  C+PNTVTYN+LMRMF G KS D                   TYR+L+++F
Sbjct: 416  RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475

Query: 1434 CGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQMKKHEELVEKMVERGFASR 1613
            CGMGHWN AY  FKEM+EEKCL PSL +YEMVL QLR+AGQ+KKHEELVEKM+++G  +R
Sbjct: 476  CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535

Query: 1614 PL 1619
            PL
Sbjct: 536  PL 537