BLASTX nr result

ID: Sinomenium22_contig00027050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00027050
         (352 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC04124.1| Ribonuclease J [Morus notabilis]                        60   2e-07
ref|XP_002511207.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>gb|EXC04124.1| Ribonuclease J [Morus notabilis]
          Length = 872

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = +1

Query: 169 MAALSALSVCQCMLSSRLNHRKPFVSCSIASPGVTGIPGHRNKVPRKRTGKREGAGKSME 348
           MAAL +LS+C C L  R    K   SCS+ SP   G PG  +  PRKRTG++EG  KSME
Sbjct: 27  MAALGSLSLCPCSLLWRPKLTKRSFSCSVGSPSSVGTPG--SSAPRKRTGRKEGPKKSME 84

Query: 349 D 351
           D
Sbjct: 85  D 85


>ref|XP_002511207.1| conserved hypothetical protein [Ricinus communis]
           gi|223550322|gb|EEF51809.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 880

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +1

Query: 169 MAALSALSVCQCML--SSRLNHRKPFVSCSIASPGVTGIPGHRNKVPRKRTGKREGAGKS 342
           MAA SA+S+C   L    R + RK  +SCSI S    G   H +K PRKR+G+ EGAGKS
Sbjct: 1   MAAFSAISLCPYSLLHRPRPSTRKYPISCSIGSSSTIG--SHGSKAPRKRSGRMEGAGKS 58

Query: 343 MED 351
           MED
Sbjct: 59  MED 61


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