BLASTX nr result
ID: Sinomenium22_contig00026878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00026878
(831 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006422245.1| hypothetical protein CICLE_v10007175mg [Citr... 221 3e-55
ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254... 220 4e-55
emb|CBI24192.3| unnamed protein product [Vitis vinifera] 220 4e-55
ref|XP_004233309.1| PREDICTED: uncharacterized protein LOC101252... 211 3e-52
ref|XP_006357172.1| PREDICTED: uncharacterized protein LOC102596... 206 9e-51
ref|XP_006840259.1| hypothetical protein AMTR_s00045p00036230 [A... 205 2e-50
ref|XP_007026160.1| Mitochondrial transcription termination fact... 204 3e-50
ref|XP_007211427.1| hypothetical protein PRUPE_ppa007097mg [Prun... 204 3e-50
gb|EYU46863.1| hypothetical protein MIMGU_mgv1a020717mg, partial... 202 2e-49
ref|XP_007214692.1| hypothetical protein PRUPE_ppa024122mg [Prun... 202 2e-49
ref|XP_006301305.1| hypothetical protein CARUB_v10021712mg [Caps... 201 2e-49
ref|XP_002513370.1| conserved hypothetical protein [Ricinus comm... 201 3e-49
ref|XP_002887773.1| mitochondrial transcription termination fact... 197 3e-48
ref|XP_004308258.1| PREDICTED: uncharacterized protein LOC101301... 197 4e-48
ref|XP_006389909.1| hypothetical protein EUTSA_v10019771mg [Eutr... 195 2e-47
emb|CAN64077.1| hypothetical protein VITISV_041212 [Vitis vinifera] 194 3e-47
ref|NP_565202.1| mitochondrial transcription termination factor ... 193 6e-47
ref|XP_007134176.1| hypothetical protein PHAVU_010G025900g [Phas... 189 8e-46
ref|XP_002310671.2| mitochondrial transcription termination fact... 187 5e-45
gb|EXC10440.1| hypothetical protein L484_008606 [Morus notabilis] 183 8e-44
>ref|XP_006422245.1| hypothetical protein CICLE_v10007175mg [Citrus clementina]
gi|568842835|ref|XP_006475337.1| PREDICTED:
uncharacterized protein LOC102624598 [Citrus sinensis]
gi|557524118|gb|ESR35485.1| hypothetical protein
CICLE_v10007175mg [Citrus clementina]
Length = 385
Score = 221 bits (563), Expect = 3e-55
Identities = 112/192 (58%), Positives = 141/192 (73%)
Frame = +2
Query: 254 DVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLA 433
+V ++ GCSD +I+K+F+R+P+L K VKIINCRPRFL+
Sbjct: 68 EVLKKWGCSDSDITKLFARRPTLQKADALNLRFKLSVLNELGLNSDDLVKIINCRPRFLS 127
Query: 434 TRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDL 613
+RI +ER+DFL LFGSRE L KAI+RNPSLL YDLDK IK V+LY+ +GI R DL
Sbjct: 128 SRINICFEERVDFLIKLFGSREMLCKAIVRNPSLLTYDLDKTIKPVVALYEQVGISRHDL 187
Query: 614 VPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEK 793
+P+L+SRPTLIPR+SLND+K+EYI +T ++ SKMYKYVV LIAISR+ETIREK+ANLEK
Sbjct: 188 IPMLMSRPTLIPRTSLNDQKMEYISRTQVSRASKMYKYVVTLIAISRIETIREKVANLEK 247
Query: 794 FGFSTDEVMGLF 829
FG S DE+ LF
Sbjct: 248 FGMSEDEIWSLF 259
>ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254688 [Vitis vinifera]
Length = 492
Score = 220 bits (561), Expect = 4e-55
Identities = 118/210 (56%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Frame = +2
Query: 203 TDDESLERVVKDRD-GPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXX 379
T D +L V D DVFR+ GCSD EI+KIF R+PSL +
Sbjct: 158 TPDGNLVEVRDDHPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQSKLNVLSLLG 217
Query: 380 XXXXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKH 559
VKIINCRPRFL+ RI R DERI+F LFGSR+ L KAI+RNPSLL YDL+
Sbjct: 218 LTSADLVKIINCRPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSLLIYDLNSK 277
Query: 560 IKRCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVAL 739
IKR V LY+ +G+ R+D + ++ SRPT+I R+S NDEKLEYI +TG++ SKMYKYVV L
Sbjct: 278 IKRVVELYEGMGVARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKKSKMYKYVVVL 337
Query: 740 IAISRLETIREKIANLEKFGFSTDEVMGLF 829
+ ISRLETIREK+ NLEKFGFS DEV+GLF
Sbjct: 338 MGISRLETIREKVGNLEKFGFSEDEVLGLF 367
>emb|CBI24192.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 220 bits (561), Expect = 4e-55
Identities = 118/210 (56%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Frame = +2
Query: 203 TDDESLERVVKDRD-GPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXX 379
T D +L V D DVFR+ GCSD EI+KIF R+PSL +
Sbjct: 76 TPDGNLVEVRDDHPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQSKLNVLSLLG 135
Query: 380 XXXXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKH 559
VKIINCRPRFL+ RI R DERI+F LFGSR+ L KAI+RNPSLL YDL+
Sbjct: 136 LTSADLVKIINCRPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSLLIYDLNSK 195
Query: 560 IKRCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVAL 739
IKR V LY+ +G+ R+D + ++ SRPT+I R+S NDEKLEYI +TG++ SKMYKYVV L
Sbjct: 196 IKRVVELYEGMGVARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKKSKMYKYVVVL 255
Query: 740 IAISRLETIREKIANLEKFGFSTDEVMGLF 829
+ ISRLETIREK+ NLEKFGFS DEV+GLF
Sbjct: 256 MGISRLETIREKVGNLEKFGFSEDEVLGLF 285
>ref|XP_004233309.1| PREDICTED: uncharacterized protein LOC101252455 [Solanum
lycopersicum]
Length = 379
Score = 211 bits (537), Expect = 3e-52
Identities = 107/208 (51%), Positives = 143/208 (68%)
Frame = +2
Query: 206 DDESLERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXX 385
+D++ E + + AD+F++ GCSD +ISKIF R+PSL +
Sbjct: 47 EDQTEEELCRTPKDSADLFKQWGCSDDDISKIFQRRPSLQRMELKLLDSKLKILSELGLP 106
Query: 386 XXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIK 565
+IINCRPRFL RI R L+ER++F E LFG++E LLKAI+RNPSLL YD K IK
Sbjct: 107 SSDLTRIINCRPRFLDCRINRCLEERLEFFETLFGTKEILLKAIVRNPSLLTYDFHKQIK 166
Query: 566 RCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIA 745
V+ Y+ LG+ R +LV +L++RPTLIPR+SL+DEK++YI +TG+ + MYK+VVAL A
Sbjct: 167 PIVAFYEQLGLSRSELVSMLLARPTLIPRTSLDDEKMDYIRRTGVEKGTTMYKHVVALFA 226
Query: 746 ISRLETIREKIANLEKFGFSTDEVMGLF 829
ISR ETIR+K+ANLEK GF+ DEV LF
Sbjct: 227 ISRSETIRQKVANLEKHGFTEDEVFRLF 254
>ref|XP_006357172.1| PREDICTED: uncharacterized protein LOC102596471 isoform X1 [Solanum
tuberosum] gi|565381642|ref|XP_006357173.1| PREDICTED:
uncharacterized protein LOC102596471 isoform X2 [Solanum
tuberosum] gi|565381644|ref|XP_006357174.1| PREDICTED:
uncharacterized protein LOC102596471 isoform X3 [Solanum
tuberosum]
Length = 379
Score = 206 bits (524), Expect = 9e-51
Identities = 104/208 (50%), Positives = 142/208 (68%)
Frame = +2
Query: 206 DDESLERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXX 385
+D++ E + AD+F++ GC++ +ISKIF R+PSL +
Sbjct: 47 EDQTEEELSSTPKDSADLFKQWGCTEDDISKIFQRRPSLQRMELKLLDSKLKILSELGLP 106
Query: 386 XXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIK 565
+IINCRPRFL RI R L+ER++F + LFG++E LLKAI+RNPSLL YD K IK
Sbjct: 107 SSDLTRIINCRPRFLDCRINRCLEERLEFFQTLFGTKEILLKAIVRNPSLLTYDFHKQIK 166
Query: 566 RCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIA 745
V+ Y+ LG+ R +LV +L++RPTLIPR+SL+DEK++YI +TG+ + MYK+VVAL A
Sbjct: 167 PIVAFYEQLGLSRSELVSMLLARPTLIPRTSLDDEKMDYIQRTGVEKGTTMYKHVVALFA 226
Query: 746 ISRLETIREKIANLEKFGFSTDEVMGLF 829
ISR ETIR+K+ANLEK GF+ DEV LF
Sbjct: 227 ISRSETIRQKVANLEKHGFTEDEVFRLF 254
>ref|XP_006840259.1| hypothetical protein AMTR_s00045p00036230 [Amborella trichopoda]
gi|548841977|gb|ERN01934.1| hypothetical protein
AMTR_s00045p00036230 [Amborella trichopoda]
Length = 320
Score = 205 bits (521), Expect = 2e-50
Identities = 97/191 (50%), Positives = 139/191 (72%)
Frame = +2
Query: 254 DVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLA 433
++ + GC++I++SKI R PSLLK VKI+ CR +FLA
Sbjct: 4 EILKNYGCTEIDVSKILDRHPSLLKAKIPFLESKLQILQRLGLPVSDLVKILACRAKFLA 63
Query: 434 TRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDL 613
++ GLD RI +LE LFGS+ETLL+A+++NPSLLNYD+D+ +K C+++Y+++GI R DL
Sbjct: 64 VKVKEGLDHRIQYLENLFGSKETLLRALLQNPSLLNYDVDQKLKPCIAMYENMGISRPDL 123
Query: 614 VPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEK 793
V L+I+RP ++ SSL EKL+Y+ K+GL+ +SKMYKYV++L+A+SR+ET+R KIAN EK
Sbjct: 124 VSLIITRPMIMLHSSLTPEKLDYLKKSGLSKESKMYKYVLSLLAVSRIETVRLKIANFEK 183
Query: 794 FGFSTDEVMGL 826
FGFS +EVMGL
Sbjct: 184 FGFSMEEVMGL 194
>ref|XP_007026160.1| Mitochondrial transcription termination factor family protein
[Theobroma cacao] gi|508781526|gb|EOY28782.1|
Mitochondrial transcription termination factor family
protein [Theobroma cacao]
Length = 374
Score = 204 bits (520), Expect = 3e-50
Identities = 106/202 (52%), Positives = 134/202 (66%)
Frame = +2
Query: 221 ERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXV 400
E V+ A++FR+ GCS+ ++ +IFSRQP+L V
Sbjct: 47 EAAVEPPRDSAELFRKWGCSENDLGQIFSRQPALRHAQVAPLLSKLKLLSDLGLTASDIV 106
Query: 401 KIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSL 580
+INCRPRF +RI DER+DF LFGSRE L KA++RNPSLL YD IK ++L
Sbjct: 107 TMINCRPRFFCSRINHCFDERLDFFLTLFGSREVLRKALVRNPSLLTYDFHGTIKPVIAL 166
Query: 581 YQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLE 760
Y+++GI DL+ +LISRPTLIPR+S NDEK+EYI KTG++ SKMYKYVVALI ISR+E
Sbjct: 167 YEEMGIAGNDLIAMLISRPTLIPRTSFNDEKMEYIKKTGVSKGSKMYKYVVALIGISRIE 226
Query: 761 TIREKIANLEKFGFSTDEVMGL 826
TI+EK+ NLEKFG S DEV L
Sbjct: 227 TIQEKVTNLEKFGCSEDEVWSL 248
>ref|XP_007211427.1| hypothetical protein PRUPE_ppa007097mg [Prunus persica]
gi|462407292|gb|EMJ12626.1| hypothetical protein
PRUPE_ppa007097mg [Prunus persica]
Length = 382
Score = 204 bits (520), Expect = 3e-50
Identities = 105/207 (50%), Positives = 139/207 (67%), Gaps = 1/207 (0%)
Frame = +2
Query: 209 DESLERVVKDRDGPAD-VFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXX 385
+ES+ V+D+ ++ + + GCSD +ISK+F+R+P+L
Sbjct: 49 EESVGEYVRDQPKSSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQFKLNILSGLGIS 108
Query: 386 XXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIK 565
VKIINCRPRFL+ RI DER+++ LF SRE L+KAI++NPSLL YD IK
Sbjct: 109 ASELVKIINCRPRFLSYRINHCFDERLEYFMRLFESREVLVKAIVKNPSLLTYDFHDKIK 168
Query: 566 RCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIA 745
++LY+ +G+ DL +L+SRPTLIPR+S NDEK+EYI KT L+ S MYKYVVA+I
Sbjct: 169 PAIALYEGMGLSTSDLTQILLSRPTLIPRTSFNDEKMEYIRKTRLSNHSTMYKYVVAIIG 228
Query: 746 ISRLETIREKIANLEKFGFSTDEVMGL 826
ISRLETIR+K+ANLEKFGFS DE+ GL
Sbjct: 229 ISRLETIRQKVANLEKFGFSEDEIFGL 255
>gb|EYU46863.1| hypothetical protein MIMGU_mgv1a020717mg, partial [Mimulus
guttatus]
Length = 341
Score = 202 bits (513), Expect = 2e-49
Identities = 98/191 (51%), Positives = 135/191 (70%)
Frame = +2
Query: 254 DVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLA 433
D+FR GCS+ +ISKIF R+PSL K VK+++CRPRFL
Sbjct: 25 DIFREWGCSETDISKIFERRPSLRKTDIHILQSKLEILSRLGIKSSDLVKMVHCRPRFLN 84
Query: 434 TRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDL 613
+I L+ER+++ E LFGSRE L+KAI+RNPSLL YD IK +++Y+ LG+ + DL
Sbjct: 85 CKINVCLNERLEYFESLFGSREVLVKAIVRNPSLLTYDFHNKIKPVIAMYESLGLSKTDL 144
Query: 614 VPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEK 793
+ +L+SRPTLIPR+SL+DEK++YI KTG++ +SKMYK+VV+L AISR+ETIREK+ NLEK
Sbjct: 145 ITVLLSRPTLIPRTSLDDEKIDYIRKTGVSKNSKMYKHVVSLFAISRIETIREKVLNLEK 204
Query: 794 FGFSTDEVMGL 826
+G D++ L
Sbjct: 205 YGLLEDDICNL 215
>ref|XP_007214692.1| hypothetical protein PRUPE_ppa024122mg [Prunus persica]
gi|462410557|gb|EMJ15891.1| hypothetical protein
PRUPE_ppa024122mg [Prunus persica]
Length = 381
Score = 202 bits (513), Expect = 2e-49
Identities = 103/210 (49%), Positives = 140/210 (66%), Gaps = 1/210 (0%)
Frame = +2
Query: 203 TDDESLERVVKDRDGPA-DVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXX 379
T+++S+ ++D+ + + ++ GC+D EIS IF+R P LLK
Sbjct: 47 TEEDSVGEDIEDQSKTSVQIMKQFGCTDTEISNIFTRGPFLLKADANQLQSKLERLTWLG 106
Query: 380 XXXXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKH 559
KIIN RPRFL R+ DER++FL LFGS+E L KAI+RNPS L +DL K
Sbjct: 107 ISAPELAKIINDRPRFLTCRVNHCFDERVEFLMTLFGSKEVLAKAILRNPSFLTHDLHKK 166
Query: 560 IKRCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVAL 739
IK ++LY+ +G+ DL+ +L+SRPTLIPR+S N+EK+EYI KTG+ DS+M+KYVV +
Sbjct: 167 IKPVIALYEGIGLSMPDLIQMLLSRPTLIPRTSFNEEKMEYIGKTGVPNDSRMFKYVVTI 226
Query: 740 IAISRLETIREKIANLEKFGFSTDEVMGLF 829
I +SRLETIR+K+ANLEKFGFS DEV F
Sbjct: 227 IGVSRLETIRQKVANLEKFGFSEDEVFLFF 256
>ref|XP_006301305.1| hypothetical protein CARUB_v10021712mg [Capsella rubella]
gi|482570015|gb|EOA34203.1| hypothetical protein
CARUB_v10021712mg [Capsella rubella]
Length = 401
Score = 201 bits (512), Expect = 2e-49
Identities = 105/209 (50%), Positives = 136/209 (65%)
Frame = +2
Query: 200 VTDDESLERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXX 379
V+D E + ++ P V RR GC D EISK+F+R+PSL +
Sbjct: 71 VSDKERVREILS----PLQVLRRWGCDDDEISKLFTRRPSLQRANVSQLEFKLSLLKPLG 126
Query: 380 XXXXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKH 559
VKI+NCRPRF + RI LDERI++ GS+E L KAIIRNPSL+ YDLD
Sbjct: 127 ITSSDLVKILNCRPRFFSCRIHLVLDERINYFMEFLGSKEVLRKAIIRNPSLMLYDLDHK 186
Query: 560 IKRCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVAL 739
IK + Y+ LG ++DLV +LISRPTLIPR++ N EK EYI KTG+T +SKM+KYV A+
Sbjct: 187 IKPAIEFYKRLGFSQQDLVAMLISRPTLIPRTNFNKEKFEYIRKTGVTRESKMFKYVAAI 246
Query: 740 IAISRLETIREKIANLEKFGFSTDEVMGL 826
I +SR+ETI+EK+ NLEKFGFS +E+ L
Sbjct: 247 IGVSRMETIQEKVGNLEKFGFSEEEIWHL 275
>ref|XP_002513370.1| conserved hypothetical protein [Ricinus communis]
gi|223547278|gb|EEF48773.1| conserved hypothetical
protein [Ricinus communis]
Length = 384
Score = 201 bits (511), Expect = 3e-49
Identities = 99/191 (51%), Positives = 130/191 (68%)
Frame = +2
Query: 257 VFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLAT 436
V R+ GCSD ++ KI SR+PSL VKIINCRPRFL++
Sbjct: 69 VLRKWGCSDRDLLKILSRRPSLRNADLTHLQSKLNLLQGLGIKPADLVKIINCRPRFLSS 128
Query: 437 RIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDLV 616
RI DER+ + LFGS+E LLKAI+RNPSLL YD IK ++LY+ +G+ + DL+
Sbjct: 129 RINHCFDERLQYFMTLFGSKEVLLKAIVRNPSLLTYDFHNCIKPAIALYERMGVSKNDLI 188
Query: 617 PLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEKF 796
P+L+SRPT+IPR+S +D+K+EYI +TG+ SKMYKYVV +I IS++ETIREK+AN EKF
Sbjct: 189 PMLLSRPTVIPRTSFDDQKIEYIRRTGVPNTSKMYKYVVTIIGISKIETIREKVANFEKF 248
Query: 797 GFSTDEVMGLF 829
GFS +EV F
Sbjct: 249 GFSDEEVWRFF 259
>ref|XP_002887773.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297333614|gb|EFH64032.1| mitochondrial transcription
termination factor family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 405
Score = 197 bits (502), Expect = 3e-48
Identities = 101/202 (50%), Positives = 132/202 (65%)
Frame = +2
Query: 221 ERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXV 400
E+V + P V RR GC D EISK+F+R+P+L + V
Sbjct: 78 EKVREIPSSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLV 137
Query: 401 KIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSL 580
KI+NCRPRF + RI LDERI++ + GS+E L + IIRNPSL+ YDLD IK +
Sbjct: 138 KILNCRPRFFSCRIHLVLDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEF 197
Query: 581 YQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLE 760
Y+ LG ++DLV +LISRPTLIPR++ N EK EYI KTG+T +SKM+KYV A+I +SR+E
Sbjct: 198 YKGLGCSQQDLVTMLISRPTLIPRTNFNKEKFEYIQKTGVTRESKMFKYVAAIIGVSRME 257
Query: 761 TIREKIANLEKFGFSTDEVMGL 826
TI EK+ NLEKFGFS +E+ L
Sbjct: 258 TIEEKVRNLEKFGFSEEEIWHL 279
>ref|XP_004308258.1| PREDICTED: uncharacterized protein LOC101301828 [Fragaria vesca
subsp. vesca]
Length = 380
Score = 197 bits (501), Expect = 4e-48
Identities = 104/206 (50%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Frame = +2
Query: 221 ERVVKDR-DGP---ADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXX 388
E +V+D D P A+V + GC + +IS++F R+P+L K
Sbjct: 49 ESIVEDTFDQPKTSAEVLEKWGCCEADISQLFKRRPALRKADLNQLQYKLNLLSELGITA 108
Query: 389 XXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKR 568
+KII+CRPR L+ RI DER F +FGSRE L+KAI+RNPSLL YD +K
Sbjct: 109 PDLLKIIDCRPRLLSLRIDHCFDERHKFFMKIFGSRELLVKAIVRNPSLLIYDFHNKVKP 168
Query: 569 CVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAI 748
++LY+ +G+ RE+LVP+L+SRPTLIPR+ NDEK+EYI KTGL+ S+MYKYVV LI I
Sbjct: 169 TIALYEGMGLSREELVPMLLSRPTLIPRTVFNDEKVEYIQKTGLSNKSRMYKYVVTLIGI 228
Query: 749 SRLETIREKIANLEKFGFSTDEVMGL 826
SRLETI E+I+N EKFGFS DE+ L
Sbjct: 229 SRLETISERISNFEKFGFSEDEIFSL 254
>ref|XP_006389909.1| hypothetical protein EUTSA_v10019771mg [Eutrema salsugineum]
gi|557086343|gb|ESQ27195.1| hypothetical protein
EUTSA_v10019771mg [Eutrema salsugineum]
Length = 392
Score = 195 bits (495), Expect = 2e-47
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
Frame = +2
Query: 209 DESLERV----VKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXX 376
D+S+ +V V+ P +V R+ GC++ EISK+F R+PSL +
Sbjct: 57 DQSVNKVECVQVRQVLSPLEVLRKWGCNEDEISKLFIRRPSLQRANAAQLEFQLSLLTPL 116
Query: 377 XXXXXXXVKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDK 556
VKI+NCRPRF R+ LDERI++ + GS+E L K IIRNP L+ YDLD+
Sbjct: 117 GITSSDLVKIVNCRPRFFNRRVHLVLDERINYFMEVLGSKEVLRKVIIRNPCLVLYDLDE 176
Query: 557 HIKRCVSLYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVA 736
IK + Y+ LG ++DLV + ISRPTLIPR++ + EK EYI KTG+T DSKM+KYV A
Sbjct: 177 KIKPAIEFYKGLGFSQQDLVAMFISRPTLIPRTNFSKEKFEYIQKTGVTRDSKMFKYVAA 236
Query: 737 LIAISRLETIREKIANLEKFGFSTDEVMGL 826
I +SR+ETI+EK+ANLEKFGFS DEV L
Sbjct: 237 NIGVSRMETIKEKVANLEKFGFSEDEVWHL 266
>emb|CAN64077.1| hypothetical protein VITISV_041212 [Vitis vinifera]
Length = 545
Score = 194 bits (493), Expect = 3e-47
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +2
Query: 398 VKIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVS 577
VKIINCRPRFL+ RI R DERI+F LFGSR+ L KAI+RNPSLL YDL+ IKR V
Sbjct: 197 VKIINCRPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSLLIYDLNSKIKRVVE 256
Query: 578 LYQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRL 757
LY+ +G+ R+D + ++ SRPT+I R+S NDEKLEYI +TG++ SKMYKYVV L+ ISRL
Sbjct: 257 LYEGMGVARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKKSKMYKYVVVLMGISRL 316
Query: 758 ETIREKIANLEKFGFSTDEVMGLF 829
ETIREK+ NLEKFGFS DEV+GLF
Sbjct: 317 ETIREKVGNLEKFGFSEDEVLGLF 340
>ref|NP_565202.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|3152561|gb|AAC17042.1|
Contains similarity to myb protein homolog gb|Z13997
from Petunia hybrida [Arabidopsis thaliana]
gi|332198097|gb|AEE36218.1| mitochondrial transcription
termination factor family protein [Arabidopsis thaliana]
Length = 399
Score = 193 bits (491), Expect = 6e-47
Identities = 99/203 (48%), Positives = 132/203 (65%)
Frame = +2
Query: 221 ERVVKDRDGPADVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXV 400
E+V P V RR GC D EISK+F+R+P+L + V
Sbjct: 74 EKVRDITSSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLV 133
Query: 401 KIINCRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSL 580
KI+NCRPRF + R+ LDERI++ + GS+E L + IIRNPSL+ YDLD IK +
Sbjct: 134 KILNCRPRFFSCRLV--LDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEY 191
Query: 581 YQDLGIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLE 760
Y+ LG ++DLV +LISRPTLIPR++ N+EK EYI KTG+T +SKM+KYV +I +SR+E
Sbjct: 192 YKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVSRME 251
Query: 761 TIREKIANLEKFGFSTDEVMGLF 829
TI EK+ NLEKFGFS +E+ L+
Sbjct: 252 TIEEKVRNLEKFGFSEEEIWHLY 274
>ref|XP_007134176.1| hypothetical protein PHAVU_010G025900g [Phaseolus vulgaris]
gi|561007221|gb|ESW06170.1| hypothetical protein
PHAVU_010G025900g [Phaseolus vulgaris]
Length = 372
Score = 189 bits (481), Expect = 8e-46
Identities = 101/191 (52%), Positives = 127/191 (66%)
Frame = +2
Query: 254 DVFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLA 433
++ R+ GCSD ++ +IFSR PSL VKI+NCRPRF
Sbjct: 56 ELLRKWGCSDDDLVRIFSRCPSLRNADPTQVQSKLCLLSDLGLRASELVKIVNCRPRFFQ 115
Query: 434 TRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDL 613
+RI L+ERI L LF SRE L KAI+RNPSLL D ++K V LY+ LG+K+ DL
Sbjct: 116 SRINSYLEERIGHLTSLFESREVLQKAIVRNPSLLLSDGRYNVKATVELYEKLGVKKGDL 175
Query: 614 VPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEK 793
V +L+ RPT+I R+S + EKLEY+ +TGLT DSKMYKYVV LI ISR+ETIREK+AN EK
Sbjct: 176 VQMLLLRPTVISRTSFDAEKLEYLSRTGLTVDSKMYKYVVTLIGISRVETIREKVANFEK 235
Query: 794 FGFSTDEVMGL 826
FGFS +E+ GL
Sbjct: 236 FGFSEEEIFGL 246
>ref|XP_002310671.2| mitochondrial transcription termination factor family protein
[Populus trichocarpa] gi|550334389|gb|EEE91121.2|
mitochondrial transcription termination factor family
protein [Populus trichocarpa]
Length = 302
Score = 187 bits (474), Expect = 5e-45
Identities = 96/176 (54%), Positives = 120/176 (68%)
Frame = +2
Query: 299 IFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIINCRPRFLATRIGRGLDERIDFLE 478
+F R+PSL VKIINCRPR L+ RI DER+++
Sbjct: 1 MFLRRPSLRNADLSQLQFKLNLLWGLGITSNDLVKIINCRPRLLSVRINHFFDERLEYFM 60
Query: 479 PLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDLGIKREDLVPLLISRPTLIPRSS 658
LFGSRETLLKAIIRNPSLL YD IK ++LY+ LGI REDLVPLL+SRPT+IPR+S
Sbjct: 61 TLFGSRETLLKAIIRNPSLLTYDFHNRIKPVITLYEGLGISREDLVPLLLSRPTMIPRTS 120
Query: 659 LNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIREKIANLEKFGFSTDEVMGL 826
NDEK+EYI K+G++ DS M+K+VV++I +SR +TI EK AN+EKFG S +EV L
Sbjct: 121 FNDEKMEYIRKSGVSKDSNMFKHVVSIIGVSRSQTICEKAANIEKFGMSNEEVWHL 176
>gb|EXC10440.1| hypothetical protein L484_008606 [Morus notabilis]
Length = 279
Score = 183 bits (464), Expect = 8e-44
Identities = 95/198 (47%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Frame = +2
Query: 242 DGPAD---VFRRCGCSDIEISKIFSRQPSLLKXXXXXXXXXXXXXXXXXXXXXXXVKIIN 412
D P D V R GC++ EISK+F +PSL V+I+N
Sbjct: 59 DNPKDSKEVLRNFGCNEEEISKLFLLRPSLKNPVLPQLQFKLNLLKGLGVTPSDLVRIVN 118
Query: 413 CRPRFLATRIGRGLDERIDFLEPLFGSRETLLKAIIRNPSLLNYDLDKHIKRCVSLYQDL 592
CRPR L+ RI +ER + LF S+E LLKAIIRNPSLL YD +K +++Y+ +
Sbjct: 119 CRPRILSCRINHRFNERFAYFMTLFESKEVLLKAIIRNPSLLTYDFQNMVKPVIAVYKGM 178
Query: 593 GIKREDLVPLLISRPTLIPRSSLNDEKLEYIHKTGLTPDSKMYKYVVALIAISRLETIRE 772
G+ ++DL +L RPT+IPR+S DEK+EYI KTG++ SKMYKYVV LI +SRLETIR+
Sbjct: 179 GLSKKDLSAMLQLRPTIIPRTSFGDEKMEYIRKTGVSQTSKMYKYVVTLIGVSRLETIRQ 238
Query: 773 KIANLEKFGFSTDEVMGL 826
K+ NLE+FGFS +EV+ L
Sbjct: 239 KVGNLERFGFSEEEVLEL 256