BLASTX nr result
ID: Sinomenium22_contig00026695
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00026695 (482 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307429.2| basal transcription factor complex subunit-r... 94 3e-17 gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus... 92 1e-16 ref|XP_002532948.1| RNA polymerase II transcription factor B sub... 89 6e-16 ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun... 88 1e-15 ref|XP_007019037.1| Basal transcription factor complex subunit-r... 87 2e-15 ref|XP_007019036.1| Basal transcription factor complex subunit-r... 87 2e-15 ref|XP_004290858.1| PREDICTED: general transcription factor IIH ... 86 5e-15 ref|XP_004290857.1| PREDICTED: general transcription factor IIH ... 86 5e-15 ref|XP_002284465.1| PREDICTED: general transcription factor IIH ... 86 5e-15 ref|XP_006472763.1| PREDICTED: general transcription factor IIH ... 84 2e-14 ref|XP_006472762.1| PREDICTED: general transcription factor IIH ... 84 2e-14 ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, par... 84 2e-14 ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr... 79 9e-13 ref|XP_004500559.1| PREDICTED: general transcription factor IIH ... 76 4e-12 ref|XP_004500558.1| PREDICTED: general transcription factor IIH ... 76 4e-12 ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phas... 76 6e-12 ref|XP_004170865.1| PREDICTED: general transcription factor IIH ... 75 1e-11 ref|XP_004152842.1| PREDICTED: general transcription factor IIH ... 75 1e-11 ref|NP_564050.1| basal transcription factor complex subunit-rela... 75 1e-11 ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab... 74 3e-11 >ref|XP_002307429.2| basal transcription factor complex subunit-related family protein [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal transcription factor complex subunit-related family protein [Populus trichocarpa] Length = 298 Score = 93.6 bits (231), Expect = 3e-17 Identities = 51/118 (43%), Positives = 69/118 (58%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M SVPSKLY+ NPFFW +S+SF++FL+H Sbjct: 1 MTSVPSKLYSDDVSLVVVLLDTNPFFW------TPPSSLSFSQFLSHVLAFVNSILLLNQ 54 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 A+G N+CDYIYDSS+ ++++ GSE+GRMP+ YS +LQKLEEF+I DE+L K Sbjct: 55 LNQVVVIASGYNTCDYIYDSSSDASQL-GSEDGRMPSLYSNLLQKLEEFMIKDEKLGK 111 >gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus notabilis] Length = 236 Score = 91.7 bits (226), Expect = 1e-16 Identities = 53/118 (44%), Positives = 65/118 (55%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NP FW +T+S+ F+ FL+H Sbjct: 1 MASAPSKLYADDVSLLMVLLDTNPLFW-------STSSLPFSNFLSHVLSFLNSILLLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSCDYI+DSS +++R G ENGRMPA S +LQKLEEFV+ DE+L K Sbjct: 54 LNQVAVIATGYNSCDYIFDSSVSTSR--GLENGRMPALCSNLLQKLEEFVVRDEQLCK 109 >ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus communis] gi|223527277|gb|EEF29432.1| RNA polymerase II transcription factor B subunit, putative [Ricinus communis] Length = 266 Score = 89.0 bits (219), Expect = 6e-16 Identities = 51/118 (43%), Positives = 63/118 (53%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MASVPSKLY+ NPFFW TT+S+ F++FL+H Sbjct: 1 MASVPSKLYSDDVSLVMVLLDTNPFFW-------TTSSLPFSQFLSHVLAFLNSILLLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 A G NSCDYIYDSS S+ GR+PA YS +LQKLE+F+I DE+L K Sbjct: 54 LNQVVVIANGYNSCDYIYDSSLVMNH--SSDEGRIPALYSDLLQKLEDFMIRDEKLGK 109 >ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica] gi|462420187|gb|EMJ24450.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica] Length = 295 Score = 87.8 bits (216), Expect = 1e-15 Identities = 53/118 (44%), Positives = 62/118 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NPFFW S S+ F+ FL+H Sbjct: 1 MASAPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSVFLSHVLTFLNSILLLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSC YIYDSS ++ +GS+NGRMPA +LQKLEEFVI DE+L K Sbjct: 54 LNQVVVIATGYNSCSYIYDSSTSTN--QGSDNGRMPARCVNLLQKLEEFVIEDEQLIK 109 >ref|XP_007019037.1| Basal transcription factor complex subunit-related isoform 2 [Theobroma cacao] gi|508724365|gb|EOY16262.1| Basal transcription factor complex subunit-related isoform 2 [Theobroma cacao] Length = 274 Score = 87.4 bits (215), Expect = 2e-15 Identities = 52/118 (44%), Positives = 62/118 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NPFFW S S+SF++FL+H Sbjct: 1 MASAPSKLYADDVSLVVVLVDTNPFFWSAS-------SLSFSQFLSHVLAFLNAILTLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSC+YI+DSS S + ENGRMP S +LQKLEEF+I DE+L K Sbjct: 54 LNQVVVIATGYNSCNYIFDSS--SDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSK 109 >ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1 [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal transcription factor complex subunit-related isoform 1 [Theobroma cacao] Length = 296 Score = 87.4 bits (215), Expect = 2e-15 Identities = 52/118 (44%), Positives = 62/118 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NPFFW S S+SF++FL+H Sbjct: 1 MASAPSKLYADDVSLVVVLVDTNPFFWSAS-------SLSFSQFLSHVLAFLNAILTLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSC+YI+DSS S + ENGRMP S +LQKLEEF+I DE+L K Sbjct: 54 LNQVVVIATGYNSCNYIFDSS--SDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSK 109 >ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform 2 [Fragaria vesca subsp. vesca] Length = 298 Score = 85.9 bits (211), Expect = 5e-15 Identities = 52/118 (44%), Positives = 63/118 (53%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MASVPSKLYA NPFFW S S+ F+++L+H Sbjct: 1 MASVPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSKYLSHVLTFLNSILLLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG +SC YIYDS ASA +GS+ GRMPA S +L+KLEEFV DE+L K Sbjct: 54 LNQVVVIATGYSSCSYIYDS--ASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLK 109 >ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform 1 [Fragaria vesca subsp. vesca] Length = 300 Score = 85.9 bits (211), Expect = 5e-15 Identities = 52/118 (44%), Positives = 63/118 (53%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MASVPSKLYA NPFFW S S+ F+++L+H Sbjct: 1 MASVPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSKYLSHVLTFLNSILLLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG +SC YIYDS ASA +GS+ GRMPA S +L+KLEEFV DE+L K Sbjct: 54 LNQVVVIATGYSSCSYIYDS--ASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLK 109 >ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis vinifera] gi|302141830|emb|CBI19033.3| unnamed protein product [Vitis vinifera] Length = 297 Score = 85.9 bits (211), Expect = 5e-15 Identities = 50/118 (42%), Positives = 62/118 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MA VPSKLY+ NPFFW +T S+ F++FL+H Sbjct: 1 MAPVPSKLYSDDVSLLVVLLDTNPFFW-------STASLPFSKFLSHVLAFLNSILLINQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSC++I+DSS+ A ENGRMPA S +LQKLEEFV DE+L K Sbjct: 54 LNQVVVIATGCNSCNFIFDSSSVPAN-PNLENGRMPALCSNLLQKLEEFVTGDEKLSK 110 >ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X2 [Citrus sinensis] Length = 293 Score = 84.3 bits (207), Expect = 2e-14 Identities = 49/118 (41%), Positives = 61/118 (51%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLY+ NPFFW S S+SF++FLTH Sbjct: 1 MASAPSKLYSDDVSLVVVLLDTNPFFWSSS-------SLSFSQFLTHVLAFFNAILTLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSCDY+YDSS+ + G NGRMP+ + +LQ LEEF+ DE+L K Sbjct: 54 LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGK 109 >ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X1 [Citrus sinensis] Length = 298 Score = 84.3 bits (207), Expect = 2e-14 Identities = 49/118 (41%), Positives = 61/118 (51%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLY+ NPFFW S S+SF++FLTH Sbjct: 1 MASAPSKLYSDDVSLVVVLLDTNPFFWSSS-------SLSFSQFLTHVLAFFNAILTLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSCDY+YDSS+ + G NGRMP+ + +LQ LEEF+ DE+L K Sbjct: 54 LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGK 109 >ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, partial [Citrus clementina] gi|557536296|gb|ESR47414.1| hypothetical protein CICLE_v100020021mg, partial [Citrus clementina] Length = 174 Score = 84.3 bits (207), Expect = 2e-14 Identities = 49/118 (41%), Positives = 61/118 (51%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLY+ NPFFW S S+SF++FLTH Sbjct: 1 MASAPSKLYSDDVSLVVVLLDTNPFFWSSS-------SLSFSQFLTHVLAFLNAILTLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG NSCDY+YDSS+ + G NGRMP+ + +LQ LEEF+ DE+L K Sbjct: 54 LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGK 109 >ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum] gi|557094384|gb|ESQ34966.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum] Length = 300 Score = 78.6 bits (192), Expect = 9e-13 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MASV SKLY+ NPFFW +TTSI F++FL+H Sbjct: 1 MASVASKLYSDDVSLLVLLLDTNPFFW-------STTSIKFSQFLSHVLAFLNAVLGLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSS-AASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEK 424 ATG +SCDYIYDSS + E S +G MPA + +L+KLE+F DE L K Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTPNGNFESSGSG-MPALFGSLLEKLEDFAAKDEELSK 111 >ref|XP_004500559.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X2 [Cicer arietinum] Length = 294 Score = 76.3 bits (186), Expect = 4e-12 Identities = 47/116 (40%), Positives = 54/116 (46%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M S PSKLYA NPFFW TT F+EFL+ Sbjct: 1 MTSAPSKLYADDVSLLVVTLDTNPFFW-------TTFPFHFSEFLSQVLAFLNSILLLGQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL 418 ATG NSC YIYDS+ S R S NG MPA YS +L LEEF+ D++L Sbjct: 54 LNQLVVIATGCNSCGYIYDST--SNRNHASTNGTMPALYSNLLHNLEEFLARDQKL 107 >ref|XP_004500558.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X1 [Cicer arietinum] Length = 315 Score = 76.3 bits (186), Expect = 4e-12 Identities = 47/116 (40%), Positives = 54/116 (46%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M S PSKLYA NPFFW TT F+EFL+ Sbjct: 1 MTSAPSKLYADDVSLLVVTLDTNPFFW-------TTFPFHFSEFLSQVLAFLNSILLLGQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL 418 ATG NSC YIYDS+ S R S NG MPA YS +L LEEF+ D++L Sbjct: 54 LNQLVVIATGCNSCGYIYDST--SNRNHASTNGTMPALYSNLLHNLEEFLARDQKL 107 >ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phaseolus vulgaris] gi|561010492|gb|ESW09399.1| hypothetical protein PHAVU_009G124300g [Phaseolus vulgaris] Length = 292 Score = 75.9 bits (185), Expect = 6e-12 Identities = 47/117 (40%), Positives = 54/117 (46%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M S PSKLYA NPFFW TT FAEFL+ Sbjct: 1 MPSAPSKLYADDVSLLVVTLDTNPFFW-------TTFPFPFAEFLSQVLAFLNSILLLGQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLE 421 ATG NSC Y+YDS+ S R GS G MPA YS +L L EF+ D++LE Sbjct: 54 LNQLIVIATGCNSCAYVYDST--SERNHGSTTGTMPALYSNLLHNLHEFLARDKQLE 108 >ref|XP_004170865.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis sativus] Length = 187 Score = 75.1 bits (183), Expect = 1e-11 Identities = 44/115 (38%), Positives = 60/115 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NPFFW +T+++ F++FL+H Sbjct: 1 MASAPSKLYADDVSLLVVLLDTNPFFW-------STSALPFSKFLSHVLAFLNSILVLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDER 415 TG SC Y+Y+SS+ S G E+GRMPA +++L+ LEEFVI DE+ Sbjct: 54 LNEVVVIGTGYASCKYLYNSSSYSNH--GLEDGRMPALCTRLLKNLEEFVIGDEQ 106 >ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis sativus] Length = 295 Score = 75.1 bits (183), Expect = 1e-11 Identities = 44/115 (38%), Positives = 60/115 (52%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 MAS PSKLYA NPFFW +T+++ F++FL+H Sbjct: 1 MASAPSKLYADDVSLLVVLLDTNPFFW-------STSALPFSKFLSHVLAFLNSILVLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDER 415 TG SC Y+Y+SS+ S G E+GRMPA +++L+ LEEFVI DE+ Sbjct: 54 LNEVVVIGTGYASCKYLYNSSSYSNH--GLEDGRMPALCTRLLKNLEEFVIGDEQ 106 >ref|NP_564050.1| basal transcription factor complex subunit-related protein [Arabidopsis thaliana] gi|21537277|gb|AAM61618.1| unknown [Arabidopsis thaliana] gi|92856638|gb|ABE77412.1| At1g18340 [Arabidopsis thaliana] gi|332191584|gb|AEE29705.1| basal transcription factor complex subunit-related protein [Arabidopsis thaliana] Length = 301 Score = 75.1 bits (183), Expect = 1e-11 Identities = 45/119 (37%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M ++ SK Y+ NP FW +TTSI+F++FL+H Sbjct: 1 MPAIASKQYSDDVSLLVLLLDTNPLFW-------STTSITFSQFLSHVLAFLNAVLGLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGR-MPAFYSKVLQKLEEFVISDERLEK 424 ATG +SCDYIYDSS S NG MPA + +L+KLEEFV DE L K Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTSNHGNFESNGTGMPAIFGSLLKKLEEFVTKDEELSK 112 >ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata] Length = 301 Score = 73.6 bits (179), Expect = 3e-11 Identities = 45/119 (37%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Frame = +2 Query: 71 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 250 M SV SK Y+ NP FW +TTSI+F++FL+H Sbjct: 1 MPSVVSKQYSDDVSLLVLLLDTNPLFW-------STTSITFSQFLSHVLAFLNAVLGLNQ 53 Query: 251 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGR-MPAFYSKVLQKLEEFVISDERLEK 424 ATG +SCDYIYDSS S NG MPA + +L+KLE+FV DE L + Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTSNHGNLESNGTGMPALFGSLLKKLEDFVTKDEELSR 112