BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00026182
         (969 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   155   2e-85
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   159   2e-83
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   158   4e-82
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   154   1e-80
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   138   2e-80
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   138   2e-80
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   145   1e-79
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   148   7e-79
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       157   3e-77
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   147   6e-76
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   149   6e-76
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   149   6e-76
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   144   3e-74
gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlise...   135   5e-70
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]     140   9e-70
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...   140   9e-70
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...   140   3e-69
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...   138   3e-69
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   135   5e-68
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   135   5e-68

>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  155 bits (391), Expect(4) = 2e-85
 Identities = 74/122 (60%), Positives = 87/122 (71%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TCR  F+  TAFSF+ T +  VIKCDF +EFLVR+I EIKQ  +          
Sbjct: 163 VDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             +P + YRTADDDI V+VPFDLLDDDDPWIRTTDFT  GAIGRC  Y++S+ PRHG +L
Sbjct: 223 ASAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKL 282

Query: 487 EK 482
            K
Sbjct: 283 RK 284



 Score =  102 bits (254), Expect(4) = 2e-85
 Identities = 44/87 (50%), Positives = 69/87 (79%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ +A+D+LK+R++   +L + + +RD  EP++GMP+++PFFCI  KEGI+F+++FLVNA
Sbjct: 281 KLRKAVDFLKERRVQEEYLRRPIRIRD--EPDFGMPMTDPFFCIHHKEGIAFDVLFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTREL 234
           VMHKGI + H LS +FF+LLR+   E+
Sbjct: 339 VMHKGIFNQHQLSNDFFDLLRNQPTEV 365



 Score = 71.2 bits (173), Expect(4) = 2e-85
 Identities = 38/77 (49%), Positives = 45/77 (58%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+Y Y RPV D  KKLK  Q+                   E+R+L  TPTKAYC
Sbjct: 366 NVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYK+
Sbjct: 426 LPPEVELSNRVLRKYKD 442



 Score = 57.8 bits (138), Expect(4) = 2e-85
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRR   PFK S V V+IGTLVS  EF+VGW  P +GVD L+
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLV 163


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  159 bits (401), Expect(4) = 2e-83
 Identities = 75/122 (61%), Positives = 92/122 (75%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+ LFT++TAFSF+   K  VIKC+F +EFLVREI E++Q +D          
Sbjct: 163 VDPFDGTCKFLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI  TVPFDLLDDDDPWIRTTDFT+ GAIGRC  Y+IS+ PR+G++L
Sbjct: 223 SSSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKL 282

Query: 487 EK 482
           +K
Sbjct: 283 KK 284



 Score =  100 bits (249), Expect(4) = 2e-83
 Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEK---QVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFL 324
           K+ +AMDYL+ R++ N   +    Q+ VRD  EP++G+P+S+PFFCIQ KEGI F +MFL
Sbjct: 281 KLKKAMDYLRARRV-NVLEDSPKWQLRVRD--EPDFGLPMSDPFFCIQHKEGIDFRVMFL 337

Query: 323 VNAVMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           VNAVMHKGI++ H LS++FF+LLRS  +++       IC
Sbjct: 338 VNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHIC 376



 Score = 64.7 bits (156), Expect(4) = 2e-83
 Identities = 38/77 (49%), Positives = 44/77 (57%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIAAL H+ SY  PV D  ++LK V K                  VEVR+L  TP+KAYC
Sbjct: 368 NIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYC 427

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLR YKE
Sbjct: 428 LPPEVELSNRVLRNYKE 444



 Score = 55.5 bits (132), Expect(4) = 2e-83
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFKF +V ++IG LVS  E++ GW  P+SGVD L+
Sbjct: 121 NQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLV 163


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
           gi|462422376|gb|EMJ26639.1| hypothetical protein
           PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  158 bits (400), Expect(4) = 4e-82
 Identities = 77/122 (63%), Positives = 90/122 (73%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  FT +TAFSF+ T+K  VIKCDF +EFLVREI EIKQ  D          
Sbjct: 162 VDPFDGTCKFCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRL 221

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP +SYRTADDDI  +VPFDLLDDDDPWIRTTDFT  GAIGRC  Y++ + PRHG++L
Sbjct: 222 TSSPWVSYRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKL 281

Query: 487 EK 482
           +K
Sbjct: 282 KK 283



 Score = 93.6 bits (231), Expect(4) = 4e-82
 Identities = 46/96 (47%), Positives = 66/96 (68%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ +AM+YL++R++    ++    ++D  EP++GM  + PFF IQ +EGISFEIMFLVNA
Sbjct: 280 KLKKAMNYLRERRVKEVCIKWPPKIQD--EPDFGMSNTEPFFSIQYEEGISFEIMFLVNA 337

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           VMHKG V+ H LS+ FF LLRS  +E+       +C
Sbjct: 338 VMHKGTVNQHQLSDSFFHLLRSQPKEINVAALKHLC 373



 Score = 71.6 bits (174), Expect(4) = 4e-82
 Identities = 39/77 (50%), Positives = 45/77 (58%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+ SY  PV D C++LK VQ                    EVR+L  TPTKAYC
Sbjct: 365 NVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVITPTKAYC 424

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYKE
Sbjct: 425 LPPEVELSNRVLRKYKE 441



 Score = 51.6 bits (122), Expect(4) = 4e-82
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFK S+V V+IG+LV + EF+  W  P  GVD ++
Sbjct: 120 NRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIV 162


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  154 bits (389), Expect(4) = 1e-80
 Identities = 73/122 (59%), Positives = 88/122 (72%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD  C+  FT +TAFSF+ T +  VI+CDF LEFLVR+I EIKQ  D          
Sbjct: 163 VDPFDGKCKFCFTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             +P + YRTADDDI V VPFDLLDDDDPWIRTTDFT  GAIGRC  Y++S+ PRHG++L
Sbjct: 223 ASAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKL 282

Query: 487 EK 482
           ++
Sbjct: 283 KR 284



 Score = 89.4 bits (220), Expect(4) = 1e-80
 Identities = 43/96 (44%), Positives = 64/96 (66%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+++L++R++    L + + V    EPEY MP+S+PFFCI  +EG+ F +MFLVNA
Sbjct: 281 KLKRALNFLRERRVQEDCLRRPLHVT--AEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           VMHKGI + H LS+ FF+LLR+   ++       IC
Sbjct: 339 VMHKGIFNQHQLSDSFFDLLRNQPLDVNIAALRHIC 374



 Score = 67.8 bits (164), Expect(4) = 1e-80
 Identities = 37/77 (48%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIAAL H+ SY  PV D  K+LK VQ+                  VE+R+L  TPT+AYC
Sbjct: 366 NIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLR+YK+
Sbjct: 426 LPPEVELSNRVLRRYKD 442



 Score = 59.3 bits (142), Expect(4) = 1e-80
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFK S+V V+IGTLVS  EF VGW  P SGVD L+
Sbjct: 121 NQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLV 163


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  138 bits (348), Expect(4) = 2e-80
 Identities = 68/122 (55%), Positives = 83/122 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  FT + AF+ + + +  VIKC+F +EFLVREI  +KQ  +          
Sbjct: 163 VDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI V VPFD+LDDDDPWIRTTDFT  GAIGRC  Y+IS+S RH  +L
Sbjct: 223 ASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKL 282

Query: 487 EK 482
            K
Sbjct: 283 SK 284



 Score = 96.3 bits (238), Expect(4) = 2e-80
 Identities = 44/87 (50%), Positives = 66/87 (75%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ + + YL +R++    L + + +R+  EP++ +P+S+PFFCI  +EGISFEIMFLVNA
Sbjct: 281 KLSKVITYLGERRVQVDSLSRPITIRE--EPDFEVPMSDPFFCIHYEEGISFEIMFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTREL 234
           VMHKGI++ H LS+ FF+LLR  +RE+
Sbjct: 339 VMHKGIINQHQLSDSFFDLLRGQSREV 365



 Score = 75.5 bits (184), Expect(4) = 2e-80
 Identities = 41/77 (53%), Positives = 48/77 (62%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+YSY  PV D CK+LK VQ+                  VEVR+L  TPTKAYC
Sbjct: 366 NVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYK+
Sbjct: 426 LPPEVELSNRVLRKYKD 442



 Score = 59.3 bits (142), Expect(4) = 2e-80
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+R RT  PFK  +VCV+IGTLVS  EF+V W  PASG D L+
Sbjct: 121 NQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLV 163


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  138 bits (348), Expect(4) = 2e-80
 Identities = 68/122 (55%), Positives = 83/122 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  FT + AF+ + + +  VIKC+F +EFLVREI  +KQ  +          
Sbjct: 163 VDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI V VPFD+LDDDDPWIRTTDFT  GAIGRC  Y+IS+S RH  +L
Sbjct: 223 ASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKL 282

Query: 487 EK 482
            K
Sbjct: 283 SK 284



 Score = 96.3 bits (238), Expect(4) = 2e-80
 Identities = 44/87 (50%), Positives = 66/87 (75%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ + + YL +R++    L + + +R+  EP++ +P+S+PFFCI  +EGISFEIMFLVNA
Sbjct: 281 KLSKVITYLGERRVQVDSLSRPITIRE--EPDFEVPMSDPFFCIHYEEGISFEIMFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTREL 234
           VMHKGI++ H LS+ FF+LLR  +RE+
Sbjct: 339 VMHKGIINQHQLSDSFFDLLRGQSREV 365



 Score = 75.5 bits (184), Expect(4) = 2e-80
 Identities = 41/77 (53%), Positives = 48/77 (62%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+YSY  PV D CK+LK VQ+                  VEVR+L  TPTKAYC
Sbjct: 366 NVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYK+
Sbjct: 426 LPPEVELSNRVLRKYKD 442



 Score = 59.3 bits (142), Expect(4) = 2e-80
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+R RT  PFK  +VCV+IGTLVS  EF+V W  PASG D L+
Sbjct: 121 NQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLV 163


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score =  145 bits (367), Expect(4) = 1e-79
 Identities = 70/122 (57%), Positives = 87/122 (71%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  F+ +TAFSF+ T +  VIKCDF +EFLVR+I EIKQ  +          
Sbjct: 163 VDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADD+I  +VPFDLLDDDD WIRTTDFT  GAIGRC  Y++ + PRHG++L
Sbjct: 223 ASSPRVWYRTADDEIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKL 282

Query: 487 EK 482
           +K
Sbjct: 283 KK 284



 Score = 97.4 bits (241), Expect(4) = 1e-79
 Identities = 45/87 (51%), Positives = 65/87 (74%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ +A+DYL+++++P  ++   + + D  EP++G  +S+PF+CI  KEGI FEIMFLVNA
Sbjct: 281 KLKKALDYLREQRVPMDYVRWPLRISD--EPDFGRSMSDPFYCIDYKEGIPFEIMFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTREL 234
           VMHKGI + H LSE+FF LLR   RE+
Sbjct: 339 VMHKGIFNQHQLSEDFFNLLRDQPREV 365



 Score = 66.6 bits (161), Expect(4) = 1e-79
 Identities = 38/77 (49%), Positives = 45/77 (58%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+YSY RPV D  K+LK V                    VE+R+L  TPTKA+C
Sbjct: 366 NVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           L   V LS+RVLRKYKE
Sbjct: 426 LLPEVELSNRVLRKYKE 442



 Score = 57.0 bits (136), Expect(4) = 1e-79
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRR   PFK S+VC+ IG +VS  EF+VGW  P  GVD L+
Sbjct: 121 NRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLV 163


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  148 bits (374), Expect(4) = 7e-79
 Identities = 71/122 (58%), Positives = 84/122 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  F+  TAFS + T +  VIKCDF +EFLVR+I EI Q  +          
Sbjct: 163 VDPFDGTCKFCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             +P + YRTADDDI   VPFDLLDDDDPWIRTTDFT  GAIGRC  Y++S+ PRHGS+L
Sbjct: 223 ASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKL 282

Query: 487 EK 482
            K
Sbjct: 283 RK 284



 Score = 93.2 bits (230), Expect(4) = 7e-79
 Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEK-QVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVN 318
           K+ +A+ YLK+R++     E  +  +R   EP++GMP+S+PFFCI  KEGI+FE++FLVN
Sbjct: 281 KLRKAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVN 340

Query: 317 AVMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           AVMHKGI + H LS +FF+LLR+   E+       IC
Sbjct: 341 AVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHIC 377



 Score = 65.1 bits (157), Expect(4) = 7e-79
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N++AL H+ +Y RPV +  ++LK VQ+                  VE+R+L  TPTKAYC
Sbjct: 369 NVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYC 428

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYK+
Sbjct: 429 LPPEVELSNRVLRKYKD 445



 Score = 57.8 bits (138), Expect(4) = 7e-79
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFK S+V  +IG LVS  EF+VGW  P SGVD L+
Sbjct: 121 NQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLV 163


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  157 bits (396), Expect(4) = 3e-77
 Identities = 75/122 (61%), Positives = 89/122 (72%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD  C+  FT +TAFSF+D  K  ++KCDF +EFLVR+I EIKQ  D          
Sbjct: 159 VDPFDGLCKFCFTRDTAFSFKDMAKLAMMKCDFKVEFLVRDINEIKQYTDTSHLVVLLLL 218

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI V+VPFDLLDDDDPWIRTTDFT  GAIGRC  Y++S+ PRHGS+L
Sbjct: 219 ASSPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGSKL 278

Query: 487 EK 482
           +K
Sbjct: 279 KK 280



 Score = 79.7 bits (195), Expect(4) = 3e-77
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ +AM YL++R++    L K + ++   EP++ +P+S+P F +  K GI FEIMFL+N 
Sbjct: 277 KLKKAMSYLRERRVQETPLRKALRIQS--EPDFAVPMSDPIFYVHGKHGIPFEIMFLLNV 334

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRE--LKTLQH 219
           ++HKGI + H++S+  F+L R+  RE  L  L+H
Sbjct: 335 IVHKGIFNQHNISDGLFDLFRNQPREINLAALKH 368



 Score = 70.9 bits (172), Expect(4) = 3e-77
 Identities = 39/77 (50%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+ SY RPV D   KLK+VQ+                   EVR+L  TPT+AYC
Sbjct: 362 NLAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDIAEVRRLVITPTRAYC 421

Query: 51  LPAVVGLSSRVLRKYKE 1
           LP  V LS+RVLRKYKE
Sbjct: 422 LPPEVELSNRVLRKYKE 438



 Score = 51.2 bits (121), Expect(4) = 3e-77
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P K ++V V+IG LV   EF+V W  P+ GVD L+
Sbjct: 117 NQRRRTTTPIKLADVIVEIGNLVRRDEFFVAWRGPSYGVDFLV 159


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  147 bits (371), Expect(4) = 6e-76
 Identities = 70/122 (57%), Positives = 87/122 (71%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD  CR+ F+ +TAFS +  EK  VIKCDF +EF+VR+I E+++  D          
Sbjct: 163 VDPFDRMCRLRFSRDTAFSIKQNEKKAVIKCDFKVEFMVRDIYEVRRYDDTSYRVVLLHL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI  +V FDLLDDDDPWIRTTDFT  GAIGRC +Y+IS+ PRHG++L
Sbjct: 223 ASSPLVWYRTADDDIEESVSFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKL 282

Query: 487 EK 482
            K
Sbjct: 283 MK 284



 Score = 87.4 bits (215), Expect(4) = 6e-76
 Identities = 41/96 (42%), Positives = 69/96 (71%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+ +AM YL  +++  + L++ + ++D  EP +G+P+S+ FF I C+EGI+F+IMFLVNA
Sbjct: 281 KLMKAMAYLNFQRVQEFPLKRPLRIQD--EPNFGVPMSDDFFYIHCQEGITFDIMFLVNA 338

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+HKGI++ + LS+ FFE+LR+  +E+       +C
Sbjct: 339 VIHKGILNPYSLSDRFFEVLRNQPQEVNVAALKHLC 374



 Score = 66.2 bits (160), Expect(4) = 6e-76
 Identities = 36/77 (46%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+ SY RPV D  K+LK VQ+                  VEVR+L  TPT+AYC
Sbjct: 366 NVAALKHLCSYKRPVFDAAKRLKTVQEWLLRNPKLYQSSKQADDIVEVRRLVITPTRAYC 425

Query: 51  LPAVVGLSSRVLRKYKE 1
           +P    LS+RVLR+Y+E
Sbjct: 426 VPPEHELSNRVLRRYRE 442



 Score = 53.5 bits (127), Expect(4) = 6e-76
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRR   PFK S+V V+IGTLVS  EF V W  P  GV+LL+
Sbjct: 121 NQRRRKETPFKLSDVLVEIGTLVSPEEFVVAWRGPEKGVNLLV 163


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  149 bits (375), Expect(4) = 6e-76
 Identities = 69/120 (57%), Positives = 87/120 (72%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  FT++TAFSF+D  K T +KCD+ +EF+VR+I +I +  D          
Sbjct: 162 VDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQL 221

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SPCI YRTADDDI   VP+DLLDDDDPWIRTTDFTI GAIGRC  +++S+ PR+G +L
Sbjct: 222 TSSPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKL 281



 Score = 88.6 bits (218), Expect(4) = 6e-76
 Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = -2

Query: 497 IKVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVN 318
           IK+  AM+YLK++++    L +   + +  EP+YG+ +++ FFCI  K+ ISFEI+FLVN
Sbjct: 279 IKLNNAMNYLKEQRVHQVSLNRPPKILN--EPDYGVQMTDHFFCILYKKDISFEILFLVN 336

Query: 317 AVMHKGIVSHHHLSEEFFELLRSHTRE--LKTLQH 219
           AVMHKGI++ H +S+ FF+LLR+   E  L  L H
Sbjct: 337 AVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSH 371



 Score = 70.5 bits (171), Expect(4) = 6e-76
 Identities = 36/77 (46%), Positives = 49/77 (63%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL+H++++ RPV D CKKLK VQ+                  VE+R+L  TP+KAYC
Sbjct: 365 NLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYC 424

Query: 51  LPAVVGLSSRVLRKYKE 1
            P  V LS+RVLR+YK+
Sbjct: 425 FPPEVELSNRVLRRYKD 441



 Score = 46.6 bits (109), Expect(4) = 6e-76
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFK S+V V IG L     F V W  P+SG+D L+
Sbjct: 120 NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLV 162


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
           gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
           6 [Cucumis sativus]
          Length = 1197

 Score =  149 bits (375), Expect(4) = 6e-76
 Identities = 69/120 (57%), Positives = 87/120 (72%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  FT++TAFSF+D  K T +KCD+ +EF+VR+I +I +  D          
Sbjct: 162 VDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQL 221

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SPCI YRTADDDI   VP+DLLDDDDPWIRTTDFTI GAIGRC  +++S+ PR+G +L
Sbjct: 222 TASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKL 281



 Score = 88.6 bits (218), Expect(4) = 6e-76
 Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = -2

Query: 497 IKVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVN 318
           IK+  AM+YLK++++    L +   + +  EP+YG+ +++ FFCI  K+ ISFEI+FLVN
Sbjct: 279 IKLNNAMNYLKEQRVHQVSLNRPPKILN--EPDYGVQMTDHFFCILYKKDISFEILFLVN 336

Query: 317 AVMHKGIVSHHHLSEEFFELLRSHTRE--LKTLQH 219
           AVMHKGI++ H +S+ FF+LLR+   E  L  L H
Sbjct: 337 AVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSH 371



 Score = 70.5 bits (171), Expect(4) = 6e-76
 Identities = 36/77 (46%), Positives = 49/77 (63%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL+H++++ RPV D CKKLK VQ+                  VE+R+L  TP+KAYC
Sbjct: 365 NLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYC 424

Query: 51  LPAVVGLSSRVLRKYKE 1
            P  V LS+RVLR+YK+
Sbjct: 425 FPPEVELSNRVLRRYKD 441



 Score = 46.6 bits (109), Expect(4) = 6e-76
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  PFK S+V V IG L     F V W  P+SG+D L+
Sbjct: 120 NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLV 162


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  144 bits (364), Expect(4) = 3e-74
 Identities = 70/122 (57%), Positives = 84/122 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFD TC+  F+ +TAFSF+ T +  VIKCDF +EFLVREI E+KQ  +          
Sbjct: 163 VDPFDCTCKFCFSRDTAFSFKGTNEHAVIKCDFKVEFLVREINEVKQYSEPTGFVVLLQL 222

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDD   TVPF LLDDDD WIRTTDFT  GAIGRC  Y++ + PRHG +L
Sbjct: 223 ASSPWVWYRTADDDFEKTVPFGLLDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKL 282

Query: 487 EK 482
           +K
Sbjct: 283 KK 284



 Score = 88.6 bits (218), Expect(4) = 3e-74
 Identities = 45/88 (51%), Positives = 65/88 (73%)
 Frame = -2

Query: 497 IKVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVN 318
           +K+ +AMDYL++R++P   L  Q+ +RD  EP++G  +S+ F+ I  KEGI FEIMFLVN
Sbjct: 280 LKLKKAMDYLRERRVPVEDLRSQLRIRD--EPDFGRSMSDHFYYIY-KEGIPFEIMFLVN 336

Query: 317 AVMHKGIVSHHHLSEEFFELLRSHTREL 234
           AV+HKGI + H LS +FF LLR+ + E+
Sbjct: 337 AVLHKGIFNQHQLSMDFFRLLRNQSMEV 364



 Score = 64.3 bits (155), Expect(4) = 3e-74
 Identities = 36/77 (46%), Positives = 44/77 (57%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+AAL H+YSY  PV D  ++LK V                    VE+R+L  TPTKAYC
Sbjct: 365 NVAALKHIYSYRHPVYDAYERLKDVHDWLLKNPKLFKSPPQLDDIVEIRRLVITPTKAYC 424

Query: 51  LPAVVGLSSRVLRKYKE 1
           L   V LS+RVLRKYK+
Sbjct: 425 LLPEVELSNRVLRKYKD 441



 Score = 51.2 bits (121), Expect(4) = 3e-74
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRR   PFK  +V ++IGTL S  EF VGW  P SGV+ L+
Sbjct: 121 NRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLV 163


>gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlisea aurea]
          Length = 1195

 Score =  135 bits (339), Expect(4) = 5e-70
 Identities = 67/122 (54%), Positives = 82/122 (67%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDP++ TC+I F  +TAFS  D ++  V+KC+F +EF  REI EIK+ +D          
Sbjct: 156 VDPYNGTCKIQFERDTAFSITDEDRLVVMKCNFKIEFTPREIIEIKRYRDFYSLIIMLQL 215

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP I YRTADDDI   VPFDLL+DDDPWIRTTDFT  GAIGRC  Y+IS+ P  G +L
Sbjct: 216 FSSPLIYYRTADDDIEDAVPFDLLEDDDPWIRTTDFTSTGAIGRCNTYRISVRPLSGPQL 275

Query: 487 EK 482
            K
Sbjct: 276 LK 277



 Score = 85.1 bits (209), Expect(4) = 5e-70
 Identities = 42/86 (48%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = -2

Query: 485 EAMDYLKDRQIPNY--FLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNAV 312
           +A+DYL+ R++  +  F  K + V D  EP +G  +S+PFFCIQ  +G+SF+I FLVNAV
Sbjct: 277 KALDYLRLRRVKVFDEFKGKHIRVMD--EPGFGTLMSDPFFCIQNVKGLSFKITFLVNAV 334

Query: 311 MHKGIVSHHHLSEEFFELLRSHTREL 234
           +H GI+++H ++EEFF+LLR+   EL
Sbjct: 335 LHSGIINYHQMTEEFFDLLRTQPEEL 360



 Score = 59.3 bits (142), Expect(4) = 5e-70
 Identities = 34/76 (44%), Positives = 42/76 (55%)
 Frame = -1

Query: 228 IAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYCL 49
           + ALTH+    RPV D  K LK VQK                  VEVR+L  TPT+AYC+
Sbjct: 362 VPALTHLSFSKRPVYDAVKALKAVQKWLLGNPKLLERPMRNEDTVEVRRLIITPTRAYCI 421

Query: 48  PAVVGLSSRVLRKYKE 1
           P  V LS+RVLR Y++
Sbjct: 422 PPEVELSNRVLRNYRD 437



 Score = 55.1 bits (131), Expect(4) = 5e-70
 Identities = 21/43 (48%), Positives = 35/43 (81%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRTI+ +K  +V V++G++ S++EF+VGW  P+SGVD ++
Sbjct: 114 NERRRTISSYKLFDVSVEVGSMKSQNEFYVGWRGPSSGVDFIV 156


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score =  140 bits (352), Expect(4) = 9e-70
 Identities = 67/120 (55%), Positives = 84/120 (70%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTCR  FT+ TAFS +DT +  VI CD+ LE LVR+I  ++Q +           
Sbjct: 161 VDPFDNTCRFCFTKSTAFSLKDTMRHAVINCDYKLELLVRDIRTVRQYRASDGFVLLLQL 220

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI+ T P DLLDDDDPWIRTTDFT  GAIGRC+ Y++ +SPR+ ++L
Sbjct: 221 ASSPRVWYRTADDDIYETCPVDLLDDDDPWIRTTDFTQAGAIGRCLSYRVLLSPRYENKL 280



 Score = 80.9 bits (198), Expect(4) = 9e-70
 Identities = 39/96 (40%), Positives = 63/96 (65%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+DYL+ +++    +     +RD  EP +G  +S+ FFCI  KEGISFEIMFLVN+
Sbjct: 279 KLISALDYLRRQRVKEERVRWPPRIRD--EPGFGEAVSDHFFCIHHKEGISFEIMFLVNS 336

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+++   L+E FF+LLR+  +++       +C
Sbjct: 337 VLHRGVLNQFQLTERFFDLLRNQPKDVNIASLKHLC 372



 Score = 67.4 bits (163), Expect(4) = 9e-70
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIA+L H+ +Y+RPV D  K+LK VQ+                   E+R+L  TPT+AYC
Sbjct: 364 NIASLKHLCTYNRPVFDAYKRLKLVQEWVLKNPKLLVSHERSDDISEIRRLVITPTRAYC 423

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V LS+RVLRKYK
Sbjct: 424 LPPEVELSNRVLRKYK 439



 Score = 45.4 bits (106), Expect(4) = 9e-70
 Identities = 23/43 (53%), Positives = 27/43 (62%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P K S + V+IGTLVS  EF V W   A  VD L+
Sbjct: 121 NQRRRTTTPLKLSGISVEIGTLVSRDEFLVSWR--AEKVDFLV 161


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score =  140 bits (352), Expect(4) = 9e-70
 Identities = 67/120 (55%), Positives = 84/120 (70%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTCR  FT+ TAFS +DT +  VI CD+ LE LVR+I  ++Q +           
Sbjct: 177 VDPFDNTCRFCFTKSTAFSLKDTMRHAVINCDYKLELLVRDIRTVRQYRASDGFVLLLQL 236

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI+ T P DLLDDDDPWIRTTDFT  GAIGRC+ Y++ +SPR+ ++L
Sbjct: 237 ASSPRVWYRTADDDIYETCPVDLLDDDDPWIRTTDFTQAGAIGRCLSYRVLLSPRYENKL 296



 Score = 80.9 bits (198), Expect(4) = 9e-70
 Identities = 39/96 (40%), Positives = 63/96 (65%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+DYL+ +++    +     +RD  EP +G  +S+ FFCI  KEGISFEIMFLVN+
Sbjct: 295 KLISALDYLRRQRVKEERVRWPPRIRD--EPGFGEAVSDHFFCIHHKEGISFEIMFLVNS 352

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+++   L+E FF+LLR+  +++       +C
Sbjct: 353 VLHRGVLNQFQLTERFFDLLRNQPKDVNIASLKHLC 388



 Score = 67.4 bits (163), Expect(4) = 9e-70
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIA+L H+ +Y+RPV D  K+LK VQ+                   E+R+L  TPT+AYC
Sbjct: 380 NIASLKHLCTYNRPVFDAYKRLKLVQEWVLKNPKLLVSHERSDDISEIRRLVITPTRAYC 439

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V LS+RVLRKYK
Sbjct: 440 LPPEVELSNRVLRKYK 455



 Score = 45.4 bits (106), Expect(4) = 9e-70
 Identities = 23/43 (53%), Positives = 27/43 (62%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P K S + V+IGTLVS  EF V W   A  VD L+
Sbjct: 137 NQRRRTTTPLKLSGISVEIGTLVSRDEFLVSWR--AEKVDFLV 177


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
           gi|482559225|gb|EOA23416.1| hypothetical protein
           CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score =  140 bits (353), Expect(4) = 3e-69
 Identities = 67/120 (55%), Positives = 85/120 (70%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTC+  F++ TAF+F+D     VIKCD+ LE LVR+I   +Q ++          
Sbjct: 161 VDPFDNTCKFCFSKSTAFAFKDAVMHAVIKCDYKLESLVRDIQTFRQYRNSHGFVLLLQL 220

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI+ TVPFDLLDDDDPWIRTTDFT  GAIGRC+ Y++ +SPR+  +L
Sbjct: 221 ASSPRVWYRTADDDIYETVPFDLLDDDDPWIRTTDFTQVGAIGRCLSYRVLISPRYDKKL 280



 Score = 83.2 bits (204), Expect(4) = 3e-69
 Identities = 40/96 (41%), Positives = 63/96 (65%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+DYL+ R++    +     +RD  EP +G P+S+ FFCI  +EGISFEIMFLVN+
Sbjct: 279 KLTTALDYLRMRRVQEERVRWPPRIRD--EPCFGEPVSDHFFCIHHREGISFEIMFLVNS 336

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+ +   L+E FF+LLR+  +++       +C
Sbjct: 337 VLHRGVFNQFQLTERFFDLLRNQPKDVNVASLKHLC 372



 Score = 62.8 bits (151), Expect(4) = 3e-69
 Identities = 33/76 (43%), Positives = 43/76 (56%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           N+A+L H+ +Y RPV D  K+LK V +                   E+R+L  TPT+AYC
Sbjct: 364 NVASLKHLCTYKRPVFDAYKRLKLVHEWILKNPKLLGSHEKSEDISEIRRLVITPTRAYC 423

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V L +RVLRKYK
Sbjct: 424 LPPEVELPNRVLRKYK 439



 Score = 45.8 bits (107), Expect(4) = 3e-69
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P+K + V ++IGTLVS  EF V W   A GV+ L+
Sbjct: 121 NQRRRTTTPYKMTGVSLEIGTLVSRDEFLVSWR--ADGVNFLV 161


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  138 bits (348), Expect(4) = 3e-69
 Identities = 67/120 (55%), Positives = 82/120 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTC+  F + TAFSF+D     VI CD+ LE LVR+I  ++Q K+          
Sbjct: 161 VDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQYKNSHGYVLILQL 220

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDIH T+P DLLDDDDPWIRTTDFT  GAIGRC  Y++ +SPR+  +L
Sbjct: 221 ASSPRVWYRTADDDIHDTIPVDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYEKKL 280



 Score = 80.5 bits (197), Expect(4) = 3e-69
 Identities = 39/96 (40%), Positives = 63/96 (65%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A++YL+ R++    +     +R+  EP +G P+S+ FFCI  KEGISFEIMFLVN+
Sbjct: 279 KLTTALEYLRMRRVQEERVRWPPRIRN--EPCFGEPVSDHFFCIHHKEGISFEIMFLVNS 336

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+ +   L+E FF+LLR+  +++       +C
Sbjct: 337 VLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHLC 372



 Score = 65.9 bits (159), Expect(4) = 3e-69
 Identities = 35/76 (46%), Positives = 45/76 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIA+L H+ +Y RPV D  K+LK VQ+                   E+R+L  TPT+AYC
Sbjct: 364 NIASLKHLCTYKRPVFDAYKRLKLVQEWILKNPKLLGGHEQSEDISEIRRLVITPTRAYC 423

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V LS+RVLRKY+
Sbjct: 424 LPPEVELSNRVLRKYR 439



 Score = 47.4 bits (111), Expect(4) = 3e-69
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P+K + + ++IGTLVS  EF V W   A GVD L+
Sbjct: 121 NQRRRTTTPYKLAGISLEIGTLVSRDEFLVSWR--ADGVDFLV 161


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  135 bits (340), Expect(4) = 5e-68
 Identities = 67/120 (55%), Positives = 82/120 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTC+  F + TAFSF+D     VI CD+ LE LVR+I  ++Q K           
Sbjct: 161 VDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQL 220

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI+ TVP DLLDDDDPWIRTTDFT  GAIGRC  Y++ +SPR+ ++L
Sbjct: 221 ASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKL 280



 Score = 80.5 bits (197), Expect(4) = 5e-68
 Identities = 39/96 (40%), Positives = 62/96 (64%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+DY + R++    +     +R+  EP +G P+S+ FFCI  KEGISFEIMFLVN+
Sbjct: 279 KLRTALDYFRMRRVQEERVRWPPRIRN--EPCFGEPVSDHFFCIHHKEGISFEIMFLVNS 336

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+ +   L+E FF+LLR+  +++       +C
Sbjct: 337 VLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHLC 372



 Score = 65.9 bits (159), Expect(4) = 5e-68
 Identities = 35/76 (46%), Positives = 45/76 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIA+L H+ +Y RPV D  K+LK VQ+                   E+R+L  TPT+AYC
Sbjct: 364 NIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYC 423

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V LS+RVLR+YK
Sbjct: 424 LPPEVELSNRVLRRYK 439



 Score = 46.2 bits (108), Expect(4) = 5e-68
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P+K + + ++IGTLVS  +F+V W   A GVD L+
Sbjct: 121 NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLV 161


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
           gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
           Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
           AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
           Full=RNA-directed RNA polymerase 6
           gi|12324444|gb|AAG52184.1|AC012329_11 putative
           RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
           thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
           polymerase-like protein [Arabidopsis thaliana]
           gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
           gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
           6 [Arabidopsis thaliana]
          Length = 1196

 Score =  135 bits (340), Expect(4) = 5e-68
 Identities = 67/120 (55%), Positives = 82/120 (68%)
 Frame = -3

Query: 847 VDPFDNTCRILFTEETAFSFEDTEKCTVIKCDFMLEFLVREITEIKQSKDXXXXXXXXXX 668
           VDPFDNTC+  F + TAFSF+D     VI CD+ LE LVR+I  ++Q K           
Sbjct: 161 VDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQL 220

Query: 667 XXSPCISYRTADDDIHVTVPFDLLDDDDPWIRTTDFTIHGAIGRCIYYKISMSPRHGSRL 488
             SP + YRTADDDI+ TVP DLLDDDDPWIRTTDFT  GAIGRC  Y++ +SPR+ ++L
Sbjct: 221 ASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKL 280



 Score = 80.5 bits (197), Expect(4) = 5e-68
 Identities = 39/96 (40%), Positives = 62/96 (64%)
 Frame = -2

Query: 494 KVGEAMDYLKDRQIPNYFLEKQVMVRDDPEPEYGMPISNPFFCIQCKEGISFEIMFLVNA 315
           K+  A+DY + R++    +     +R+  EP +G P+S+ FFCI  KEGISFEIMFLVN+
Sbjct: 279 KLRTALDYFRMRRVQEERVRWPPRIRN--EPCFGEPVSDHFFCIHHKEGISFEIMFLVNS 336

Query: 314 VMHKGIVSHHHLSEEFFELLRSHTRELKTLQH*RIC 207
           V+H+G+ +   L+E FF+LLR+  +++       +C
Sbjct: 337 VLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHLC 372



 Score = 65.9 bits (159), Expect(4) = 5e-68
 Identities = 35/76 (46%), Positives = 45/76 (59%)
 Frame = -1

Query: 231 NIAALTHMYSYSRPVSDVCKKLKHVQKXXXXXXXXXXXXXXXXXXVEVRKLGKTPTKAYC 52
           NIA+L H+ +Y RPV D  K+LK VQ+                   E+R+L  TPT+AYC
Sbjct: 364 NIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYC 423

Query: 51  LPAVVGLSSRVLRKYK 4
           LP  V LS+RVLR+YK
Sbjct: 424 LPPEVELSNRVLRRYK 439



 Score = 46.2 bits (108), Expect(4) = 5e-68
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 969 NKRRRTINPFKFSNVCVQIGTLVSEHEFWVGWNAPASGVDLLI 841
           N+RRRT  P+K + + ++IGTLVS  +F+V W   A GVD L+
Sbjct: 121 NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLV 161