BLASTX nr result

ID: Sinomenium22_contig00025939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00025939
         (988 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-06
ref|XP_002311007.1| hypothetical protein POPTR_0008s02040g [Popu...    59   4e-06

>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/107 (27%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -2

Query: 333 MARDMAACLKEMKLSDRENTEVDLAEEVRCFPMERANRCLVGKIFT*KKINLGALKQSIG 154
           MA ++    + +++ + EN  VDL          + +  LVGK+ + + +NL ALK+ + 
Sbjct: 1   MADELVESCRRLRIVEEENEVVDLGAVESTNLTAKTSLMLVGKVLSTRAVNLDALKRVMT 60

Query: 153 RIWN-DSSLIVKEIEDRKYLLEFFNSGRKNRFIKMEPWTFENNLLAL 16
           +IW+ +S+++V+ I+   ++ +FF+   K + +   PW F+  LL +
Sbjct: 61  QIWSLNSNMVVRAIDSNSFIFQFFHWKDKAKILDGRPWLFDQKLLVI 107


>ref|XP_002311007.1| hypothetical protein POPTR_0008s02040g [Populus trichocarpa]
           gi|222850827|gb|EEE88374.1| hypothetical protein
           POPTR_0008s02040g [Populus trichocarpa]
          Length = 280

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 219 CLVGKIFT*KKINLGALKQSIGRIWNDS-SLIVKEIEDRKYLLEFFNSGRKNRFIKMEPW 43
           CL G+  T + IN  A +  + R+W     +  +E+ D KYL++FF+S    R ++  PW
Sbjct: 24  CLAGRFLTDRSINFNATRNKVARLWRPGRGMCTRELSDSKYLIQFFHSVDMKRVLEGAPW 83

Query: 42  TFENNLLAL 16
            F+N+LL L
Sbjct: 84  AFDNHLLLL 92


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