BLASTX nr result
ID: Sinomenium22_contig00025872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00025872
(649 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi... 76 1e-11
ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi... 76 1e-11
gb|EYU18187.1| hypothetical protein MIMGU_mgv1a001072mg [Mimulus... 71 3e-10
gb|EXC31704.1| Exosome component 10 [Morus notabilis] 69 1e-09
ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [A... 67 4e-09
ref|XP_007204663.1| hypothetical protein PRUPE_ppa001105mg [Prun... 67 5e-09
ref|XP_007151776.1| hypothetical protein PHAVU_004G073900g [Phas... 65 2e-08
ref|XP_006395927.1| hypothetical protein EUTSA_v10003636mg [Eutr... 64 5e-08
ref|XP_004489673.1| PREDICTED: exosome component 10-like [Cicer ... 63 9e-08
dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana] 62 1e-07
ref|XP_002319182.2| 3'-5' exonuclease domain-containing family p... 62 2e-07
ref|XP_002325430.2| 3'-5' exonuclease domain-containing family p... 60 4e-07
dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana] 60 4e-07
ref|NP_198440.2| exosome complex exonuclease RRP6L2 [Arabidopsis... 60 4e-07
ref|XP_006338891.1| PREDICTED: exosome component 10-like [Solanu... 60 6e-07
ref|XP_004248555.1| PREDICTED: exosome component 10-like [Solanu... 60 6e-07
ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arab... 60 6e-07
ref|XP_006601036.1| PREDICTED: exosome component 10-like isoform... 59 2e-06
ref|XP_006601035.1| PREDICTED: exosome component 10-like isoform... 59 2e-06
ref|XP_003551099.1| PREDICTED: exosome component 10-like isoform... 59 2e-06
>ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 75.9 bits (185), Expect = 1e-11
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 398 GKPFALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGNLRASAL 556
GK A P+D D+AYDWLVN+NDEIFERFD SLDEFQ++RK+E+ + RA AL
Sbjct: 77 GKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEESG-RALAL 128
>ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 75.9 bits (185), Expect = 1e-11
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 398 GKPFALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGNLRASAL 556
GK A P+D D+AYDWLVN+NDEIFERFD SLDEFQ++RK+E+ + RA AL
Sbjct: 77 GKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEESG-RALAL 128
>gb|EYU18187.1| hypothetical protein MIMGU_mgv1a001072mg [Mimulus guttatus]
Length = 895
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/52 (67%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Frame = +2
Query: 398 GKPFALPDDP------DEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
GKP LPDD D A DWLVN+NDEIFERFD SLDEF+RLRKKE+ G
Sbjct: 81 GKPIPLPDDKRVELDDDVALDWLVNVNDEIFERFDVSLDEFKRLRKKEEESG 132
>gb|EXC31704.1| Exosome component 10 [Morus notabilis]
Length = 1017
Score = 69.3 bits (168), Expect = 1e-09
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = +2
Query: 398 GKPFALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
GK A P+D D+AY+WLV++ND+IFERFD ++DEFQ+LRKKE+ G
Sbjct: 82 GKERAFPEDIDDAYEWLVDVNDDIFERFDMAMDEFQKLRKKEEETG 127
>ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [Amborella trichopoda]
gi|548830652|gb|ERM93575.1| hypothetical protein
AMTR_s00004p00111480 [Amborella trichopoda]
Length = 950
Score = 67.4 bits (163), Expect = 4e-09
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +2
Query: 401 KPFALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGNLRASALEITFK 571
+ LP+DPD++YDWLV+INDEIFER D S+DEF++L+KK DG+ R E F+
Sbjct: 80 RTLTLPNDPDDSYDWLVDINDEIFERIDVSVDEFKKLQKK-DGENGQRFEDFEDGFQ 135
>ref|XP_007204663.1| hypothetical protein PRUPE_ppa001105mg [Prunus persica]
gi|462400194|gb|EMJ05862.1| hypothetical protein
PRUPE_ppa001105mg [Prunus persica]
Length = 908
Score = 67.0 bits (162), Expect = 5e-09
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +2
Query: 398 GKPFALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKED 526
GK A P D D+AYDWLVN+NDE+ ERFD+S+DEF+R+RK+ +
Sbjct: 77 GKKMAFPQDLDDAYDWLVNVNDEVLERFDSSVDEFKRIRKEAE 119
>ref|XP_007151776.1| hypothetical protein PHAVU_004G073900g [Phaseolus vulgaris]
gi|561025085|gb|ESW23770.1| hypothetical protein
PHAVU_004G073900g [Phaseolus vulgaris]
Length = 880
Score = 65.1 bits (157), Expect = 2e-08
Identities = 26/43 (60%), Positives = 37/43 (86%)
Frame = +2
Query: 410 ALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGN 538
A P D D+AYDWLVN+ND++ ERFDAS+DEF+R+R++E+ G+
Sbjct: 80 AFPADVDDAYDWLVNVNDDVLERFDASMDEFRRVREEEEKTGH 122
>ref|XP_006395927.1| hypothetical protein EUTSA_v10003636mg [Eutrema salsugineum]
gi|557092566|gb|ESQ33213.1| hypothetical protein
EUTSA_v10003636mg [Eutrema salsugineum]
Length = 871
Score = 63.5 bits (153), Expect = 5e-08
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +2
Query: 398 GKPFALPDD--PDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGNLRAS 550
GKP P D DEA DWL N+NDE ERFD S+DEF+R+RKKE+ G AS
Sbjct: 83 GKPMRFPGDIEEDEADDWLCNVNDEFLERFDVSVDEFKRIRKKEEEIGRTLAS 135
>ref|XP_004489673.1| PREDICTED: exosome component 10-like [Cicer arietinum]
Length = 880
Score = 62.8 bits (151), Expect = 9e-08
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +2
Query: 410 ALPDDPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDGNL 541
A P D D++YDWLVN+NDE+ ERFD S+DEF+R+R++E+ G +
Sbjct: 85 AFPADLDDSYDWLVNVNDEVLERFDLSVDEFRRVREEEEKSGRV 128
>dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana]
Length = 834
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +2
Query: 398 GKPFALPDDPDEAY--DWLVNINDEIFERFDASLDEFQRLRKKEDGDGNL 541
GK P D D+ Y DWL N+NDE+ ERFD S+DEFQR+RKKE G++
Sbjct: 84 GKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRKKEKESGSV 133
>ref|XP_002319182.2| 3'-5' exonuclease domain-containing family protein [Populus
trichocarpa] gi|550325063|gb|EEE95105.2| 3'-5'
exonuclease domain-containing family protein [Populus
trichocarpa]
Length = 911
Score = 62.0 bits (149), Expect = 2e-07
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = +2
Query: 422 DPDEAYDWLVNINDEIFERFDASLDEFQRLRKK 520
D DEAYDWLVN+NDEIFERFDAS+DEF+R+R++
Sbjct: 98 DIDEAYDWLVNVNDEIFERFDASIDEFRRVREE 130
>ref|XP_002325430.2| 3'-5' exonuclease domain-containing family protein [Populus
trichocarpa] gi|550316869|gb|EEE99811.2| 3'-5'
exonuclease domain-containing family protein [Populus
trichocarpa]
Length = 823
Score = 60.5 bits (145), Expect = 4e-07
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = +2
Query: 422 DPDEAYDWLVNINDEIFERFDASLDEFQRLRKK 520
D DEAYDWLVN+NDEIFERFD S+DEF+R+R++
Sbjct: 95 DIDEAYDWLVNVNDEIFERFDTSIDEFKRVREE 127
>dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 60.5 bits (145), Expect = 4e-07
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 398 GKPFALPDDPDEAY--DWLVNINDEIFERFDASLDEFQRLRKKE 523
GK P D D+ Y DWL N+NDE+ ERFD S+DEFQR+RKKE
Sbjct: 84 GKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRKKE 127
>ref|NP_198440.2| exosome complex exonuclease RRP6L2 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2
[Arabidopsis thaliana] gi|332006642|gb|AED94025.1|
exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 60.5 bits (145), Expect = 4e-07
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 398 GKPFALPDDPDEAY--DWLVNINDEIFERFDASLDEFQRLRKKE 523
GK P D D+ Y DWL N+NDE+ ERFD S+DEFQR+RKKE
Sbjct: 84 GKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRKKE 127
>ref|XP_006338891.1| PREDICTED: exosome component 10-like [Solanum tuberosum]
Length = 857
Score = 60.1 bits (144), Expect = 6e-07
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = +2
Query: 398 GKPFALPDDPD--EAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
GKP + P+DPD E+ +WLVNIND++ E+ +SLDEF+ LRKKE+ G
Sbjct: 77 GKPISCPEDPDDEESEEWLVNINDDVLEKLASSLDEFKLLRKKEEETG 124
>ref|XP_004248555.1| PREDICTED: exosome component 10-like [Solanum lycopersicum]
Length = 861
Score = 60.1 bits (144), Expect = 6e-07
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = +2
Query: 398 GKPFALPDDPD--EAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
GKP + P+DPD E+ +WLVNIND++ E+ +SLDEF+ LRKKE+ G
Sbjct: 77 GKPISCPEDPDDEESEEWLVNINDDVLEKLASSLDEFKLLRKKEEETG 124
>ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata] gi|297316288|gb|EFH46711.1| hypothetical protein
ARALYDRAFT_355577 [Arabidopsis lyrata subsp. lyrata]
Length = 867
Score = 60.1 bits (144), Expect = 6e-07
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +2
Query: 398 GKPFALPDDPDE--AYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
GK P D DE A DWL N+NDE ERFD S+DEFQR+RKKE+ G
Sbjct: 83 GKSMKFPGDVDEVDAEDWLCNVNDEFIERFDVSVDEFQRIRKKEEEIG 130
>ref|XP_006601036.1| PREDICTED: exosome component 10-like isoform X3 [Glycine max]
Length = 681
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +2
Query: 410 ALPD---DPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
A PD D D AYDWLVN ND++ ERFDAS+DEF+++R++E+ G
Sbjct: 80 AFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEEEETG 124
>ref|XP_006601035.1| PREDICTED: exosome component 10-like isoform X2 [Glycine max]
Length = 837
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +2
Query: 410 ALPD---DPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
A PD D D AYDWLVN ND++ ERFDAS+DEF+++R++E+ G
Sbjct: 80 AFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEEEETG 124
>ref|XP_003551099.1| PREDICTED: exosome component 10-like isoform X1 [Glycine max]
Length = 889
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +2
Query: 410 ALPD---DPDEAYDWLVNINDEIFERFDASLDEFQRLRKKEDGDG 535
A PD D D AYDWLVN ND++ ERFDAS+DEF+++R++E+ G
Sbjct: 80 AFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEEEETG 124