BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00025782
         (454 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006837988.1| hypothetical protein AMTR_s00102p00106890 [A...    56   4e-06
gb|AGQ03792.1| photosystem II protein D2 (chloroplast) [Osmunda ...    56   6e-06
ref|YP_007108476.1| photosystem II D2 protein (photosystem q(a) ...    55   1e-05
ref|XP_003559013.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ...    55   1e-05
ref|YP_778560.1| photosystem II D2 protein [Bigelowiella natans]...    55   1e-05

>ref|XP_006837988.1| hypothetical protein AMTR_s00102p00106890 [Amborella trichopoda]
           gi|548840403|gb|ERN00557.1| hypothetical protein
           AMTR_s00102p00106890 [Amborella trichopoda]
          Length = 319

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = -3

Query: 452 HDFIF*EIHVREDPKFRALYTKTILLNKGIHAWMLA*DQPY 330
           +DF   EI   EDPKF   YTK ILLN+GIHAWM A DQP+
Sbjct: 263 YDFGTQEIRAAEDPKFETFYTKNILLNEGIHAWMAAQDQPH 303


>gb|AGQ03792.1| photosystem II protein D2 (chloroplast) [Osmunda vachellii]
          Length = 353

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -3

Query: 452 HDFIF*EIHVREDPKFRALYTKTILLNKGIHAWMLA*DQPY 330
           +DF+  EI   EDP+F  LYTK ILLN+GI AWM A DQP+
Sbjct: 297 YDFVSQEIRAAEDPEFETLYTKNILLNEGIRAWMAAQDQPH 337


>ref|YP_007108476.1| photosystem II D2 protein (photosystem q(a) protein) [Geitlerinema
           sp. PCC 7407] gi|428225827|ref|YP_007109924.1|
           photosystem II D2 protein (photosystem q(a) protein)
           [Geitlerinema sp. PCC 7407]
           gi|504983889|ref|WP_015170991.1| photosystem II D2
           protein (photosystem q(a) protein) [Geitlerinema sp. PCC
           7407] gi|427984280|gb|AFY65424.1| photosystem II D2
           protein (photosystem q(a) protein) [Geitlerinema sp. PCC
           7407] gi|427985728|gb|AFY66872.1| photosystem II D2
           protein (photosystem q(a) protein) [Geitlerinema sp. PCC
           7407]
          Length = 352

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/50 (52%), Positives = 33/50 (66%)
 Frame = -3

Query: 452 HDFIF*EIHVREDPKFRALYTKTILLNKGIHAWMLA*DQPYIL*GGYAFP 303
           +DF+  EI   EDP+F   YTK ILLN+GI AW+   DQP+    G+AFP
Sbjct: 296 YDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWLAPQDQPH---EGFAFP 342


>ref|XP_003559013.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II D2 protein-like
           [Brachypodium distachyon]
          Length = 385

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/75 (40%), Positives = 39/75 (52%)
 Frame = -3

Query: 452 HDFIF*EIHVREDPKFRALYTKTILLNKGIHAWMLA*DQPYIL*GGYAFPVGFAFSPLEI 273
           +DF+  EI   EDP+F   YTK ILLN+GI AWM A DQP+       FP     S LE+
Sbjct: 297 YDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPH---ENLIFPEELETSVLEL 353

Query: 272 SFQRQSSHATAPAII 228
            +         P ++
Sbjct: 354 MWDLLKDPQEEPELL 368


>ref|YP_778560.1| photosystem II D2 protein [Bigelowiella natans]
           gi|122227453|sp|Q06J67.1|PSBD_BIGNA RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|110810186|gb|ABG91392.1| photosystem II D2 protein
           [Bigelowiella natans]
          Length = 352

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -3

Query: 452 HDFIF*EIHVREDPKFRALYTKTILLNKGIHAWMLA*DQPY 330
           +DF+  EI   EDP+F   YTK ILLN+GI AWM+A DQP+
Sbjct: 296 YDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMVAQDQPH 336