BLASTX nr result

ID: Sinomenium22_contig00025605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00025605
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    69   5e-10
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    60   3e-07
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    59   5e-07

>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/106 (40%), Positives = 56/106 (52%)
 Frame = -2

Query: 319 QTTKQVLL**ALDHGLYKFXXXXXXXXXXXXXXPQASSVECVSSPTKSSSIWHS*LGHPS 140
           Q T+ +LL   LD GLY                   S+    S+   S  +WH+ LGHPS
Sbjct: 462 QKTQAILLKGGLDKGLYSVPSAYSSHAPQARVFQIFSTSS--STSIDSMRLWHNRLGHPS 519

Query: 139 VHIFNNVSRSCHLPNFSLYNVSICHSCRLAKSCKLPFVASQSKSIK 2
           + I N V    +LP FSL N  +C SC+LAKS KLPFV + SK++K
Sbjct: 520 LAIVNKVLNHYNLPVFSLQNKLLCDSCQLAKSHKLPFVRNYSKAMK 565


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/104 (33%), Positives = 57/104 (54%)
 Frame = -2

Query: 319 QTTKQVLL**ALDHGLYKFXXXXXXXXXXXXXXPQASSVECVSSPTKSSSIWHS*LGHPS 140
           Q TK++LL  +L+HGLY+F                  S     S T  +++WHS LGHP+
Sbjct: 125 QVTKKILLQGSLEHGLYRFPARFVPSPTAFVSSSYDRSSNI--SLTTITTLWHSRLGHPA 182

Query: 139 VHIFNNVSRSCHLPNFSLYNVSICHSCRLAKSCKLPFVASQSKS 8
            +I  ++  SC++ +   +  ++C +C+ AKS KLPF  S S++
Sbjct: 183 DNILKHILTSCNI-SHQCHKNNVCCACQFAKSHKLPFNVSVSRA 225


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/104 (32%), Positives = 57/104 (54%)
 Frame = -2

Query: 319 QTTKQVLL**ALDHGLYKFXXXXXXXXXXXXXXPQASSVECVSSPTKSSSIWHS*LGHPS 140
           Q TK++LL  +L+HGLY+F                  S     S T ++++WHS LGHP+
Sbjct: 473 QVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSNL--SLTTTTTLWHSRLGHPA 530

Query: 139 VHIFNNVSRSCHLPNFSLYNVSICHSCRLAKSCKLPFVASQSKS 8
            +I  ++  SC++ +   +  ++C +C+ AKS KLPF    S++
Sbjct: 531 DNILKHILTSCNI-SHQCHKNNVCCACQFAKSHKLPFNVXVSRA 573


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