BLASTX nr result

ID: Sinomenium22_contig00024234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00024234
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301984.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_007052404.1| Tetratricopeptide repeat-like superfamily pr...    90   3e-16
ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like i...    88   1e-15
gb|EXB38365.1| hypothetical protein L484_008023 [Morus notabilis]      87   3e-15
ref|XP_006464385.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_006445470.1| hypothetical protein CICLE_v10018805mg [Citr...    86   4e-15
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_006354648.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_006375195.1| hypothetical protein POPTR_0014s05170g [Popu...    79   6e-13
ref|XP_004231136.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004493491.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006838473.1| hypothetical protein AMTR_s00002p00150300 [A...    64   2e-08
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    64   2e-08
ref|XP_007224957.1| hypothetical protein PRUPE_ppa021344mg, part...    61   1e-07
ref|XP_006605481.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
gb|EPS59538.1| hypothetical protein M569_15265, partial [Genlise...    55   8e-06

>ref|XP_004301984.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 860

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 42/69 (60%), Positives = 56/69 (81%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           R G+PE+AL+WGQKLSQ S  F++ITYK+LD+AY N+ +D ET++ T ++ LFLDF MYI
Sbjct: 772 RQGMPEKALLWGQKLSQFSVCFDEITYKILDRAYHNMQEDPETSRATPEKSLFLDFLMYI 831

Query: 223 TFDYLQRYK 197
           T+DYL R K
Sbjct: 832 TYDYLCRNK 840


>ref|XP_007052404.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
            gi|508704665|gb|EOX96561.1| Tetratricopeptide repeat-like
            superfamily protein [Theobroma cacao]
          Length = 894

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 37/70 (52%), Positives = 55/70 (78%)
 Frame = -2

Query: 403  RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
            + G+PERALMWGQKLS++SF F++++YK++D+AYCN+ +D    K TS + L L+F MYI
Sbjct: 812  KQGMPERALMWGQKLSEISFDFDEVSYKIMDRAYCNVHKDVGFFKATSGKSLLLEFLMYI 871

Query: 223  TFDYLQRYKI 194
            T+DY  R ++
Sbjct: 872  TYDYFSRNRL 881


>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like isoform X1 [Glycine max]
           gi|571467312|ref|XP_006583900.1| PREDICTED: protein Rf1,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571467314|ref|XP_006583901.1| PREDICTED: protein Rf1,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571467316|ref|XP_006583902.1| PREDICTED: protein Rf1,
           mitochondrial-like isoform X4 [Glycine max]
           gi|571467318|ref|XP_006583903.1| PREDICTED: protein Rf1,
           mitochondrial-like isoform X5 [Glycine max]
          Length = 871

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 37/69 (53%), Positives = 53/69 (76%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PE+AL+WGQKL ++SF F++I+Y++LDQAYC +  D E  + T ++ LF+DF MYI
Sbjct: 783 KQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVELVRGTYEKHLFMDFLMYI 842

Query: 223 TFDYLQRYK 197
           TFDY  R K
Sbjct: 843 TFDYFSRNK 851


>gb|EXB38365.1| hypothetical protein L484_008023 [Morus notabilis]
          Length = 862

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PERALMWGQKLS +SF F++ITYK++ +AY +I +D +  +ETS + LFLD  MYI
Sbjct: 774 KQGMPERALMWGQKLSDISFDFDEITYKIMARAYHSIEEDADVRRETSRKSLFLDALMYI 833

Query: 223 TFDYLQRYKI 194
           T+DY  + K+
Sbjct: 834 TYDYFSKNKL 843


>ref|XP_006464385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like isoform X1 [Citrus sinensis]
           gi|568819705|ref|XP_006464386.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g01110-like isoform X2 [Citrus sinensis]
          Length = 880

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 36/67 (53%), Positives = 54/67 (80%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PE+ L+WGQKLS++SF F++ +YK++D+AY NI ++ E  +ETS++ LFLDF MYI
Sbjct: 792 KQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYHNIQENAEFFQETSEKSLFLDFLMYI 851

Query: 223 TFDYLQR 203
           T+DY  R
Sbjct: 852 TYDYFWR 858


>ref|XP_006445470.1| hypothetical protein CICLE_v10018805mg [Citrus clementina]
           gi|557547732|gb|ESR58710.1| hypothetical protein
           CICLE_v10018805mg [Citrus clementina]
          Length = 880

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 36/67 (53%), Positives = 54/67 (80%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PE+ L+WGQKLS++SF F++ +YK++D+AY NI ++ E  +ETS++ LFLDF MYI
Sbjct: 792 KQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYHNIQENAEFFQETSEKSLFLDFLMYI 851

Query: 223 TFDYLQR 203
           T+DY  R
Sbjct: 852 TYDYFWR 858


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 889

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 35/69 (50%), Positives = 54/69 (78%)
 Frame = -2

Query: 403  RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
            + G+PER LMWG KLS++ + F++ITYK++D+A+ +I +D + ++ TS + LFLDF MYI
Sbjct: 802  KQGMPERTLMWGHKLSEIPYAFDEITYKIMDKAH-HILEDADFSRVTSAKSLFLDFLMYI 860

Query: 223  TFDYLQRYK 197
            T+DY  RY+
Sbjct: 861  TYDYFCRYR 869


>ref|XP_006354648.1| PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like
            isoform X1 [Solanum tuberosum]
            gi|565376309|ref|XP_006354649.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g01110-like isoform X2 [Solanum tuberosum]
          Length = 909

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 33/67 (49%), Positives = 54/67 (80%)
 Frame = -2

Query: 403  RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
            + GLP+RAL+WGQKLS++ F F++IT+K+LD++   + ++ +   ET+++ LFLDF MYI
Sbjct: 812  KQGLPQRALVWGQKLSEIGFEFDEITHKILDKSSHCVQENTDYCTETTEKSLFLDFLMYI 871

Query: 223  TFDYLQR 203
            T+DY++R
Sbjct: 872  TYDYIRR 878


>ref|XP_006375195.1| hypothetical protein POPTR_0014s05170g [Populus trichocarpa]
           gi|550323514|gb|ERP52992.1| hypothetical protein
           POPTR_0014s05170g [Populus trichocarpa]
          Length = 706

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 32/67 (47%), Positives = 51/67 (76%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PE+ +MWGQKL+++SF F++I+ K++D+AY NI  + +  K   ++ LFLDF MY+
Sbjct: 618 KQGMPEKTIMWGQKLNEISFGFDEISIKLMDRAYRNIQDNVDVPKPPPEKSLFLDFLMYV 677

Query: 223 TFDYLQR 203
           T+DYL R
Sbjct: 678 TYDYLSR 684


>ref|XP_004231136.1| PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like
            [Solanum lycopersicum]
          Length = 909

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 33/67 (49%), Positives = 54/67 (80%)
 Frame = -2

Query: 403  RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
            + GLP+RAL+WGQKLS++ F F++IT+K+LD++   I ++ +   ET+++ LFLDF MYI
Sbjct: 812  KQGLPQRALVWGQKLSEIGFEFDEITHKILDKSSHCIQENTDYCTETTEKSLFLDFLMYI 871

Query: 223  TFDYLQR 203
            T+D+++R
Sbjct: 872  TYDHIRR 878


>ref|XP_004493491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like isoform X1 [Cicer arietinum]
          Length = 832

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/67 (46%), Positives = 48/67 (71%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PERAL+WG+KL ++ F F++I+Y +LD+A   +  + E  + T ++ LFLDF MYI
Sbjct: 744 KQGMPERALLWGEKLREICFGFDEISYIILDRANHLVQNEAELVRGTYEKSLFLDFLMYI 803

Query: 223 TFDYLQR 203
           TFD+  R
Sbjct: 804 TFDHFSR 810


>ref|XP_006838473.1| hypothetical protein AMTR_s00002p00150300 [Amborella trichopoda]
           gi|548840979|gb|ERN01042.1| hypothetical protein
           AMTR_s00002p00150300 [Amborella trichopoda]
          Length = 619

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 25/70 (35%), Positives = 48/70 (68%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+P+RALMW  +  + SF  +D T  +L++A+ + C+D + + E +++ +FLDF M++
Sbjct: 515 KQGMPDRALMWADRFRRASFSLDDATRNILERAHFDFCEDAKISDERAEKCVFLDFLMHL 574

Query: 223 TFDYLQRYKI 194
           TF+ + R +I
Sbjct: 575 TFETMCRQRI 584


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/69 (37%), Positives = 47/69 (68%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDFFMYI 224
           + G+PE+A+ WGQKLS++   F++ T+K++++AY  + +       + ++ +F+DF MYI
Sbjct: 793 KQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGVVINTSYEKSVFMDFLMYI 852

Query: 223 TFDYLQRYK 197
           T+DY  R K
Sbjct: 853 TYDYFCRTK 861


>ref|XP_007224957.1| hypothetical protein PRUPE_ppa021344mg, partial [Prunus persica]
           gi|462421893|gb|EMJ26156.1| hypothetical protein
           PRUPE_ppa021344mg, partial [Prunus persica]
          Length = 648

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFLDF 236
           + G+PE+ALMWGQK S     F+DITYK+L++AY N+ +  + +  T ++ LFLDF
Sbjct: 592 KQGMPEKALMWGQKFSDFPIWFDDITYKLLERAYHNMQEGSKISSGTPEKSLFLDF 647


>ref|XP_006605481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 326

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/54 (44%), Positives = 41/54 (75%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQETTKETSDQRLFL 242
           + G+PE+AL+WGQKL ++SF F++I+Y+++DQAY  +  D E  + T ++ LF+
Sbjct: 271 KQGMPEKALIWGQKLREISFDFDEISYQIMDQAYRLMQDDVEFVRGTYEKGLFM 324


>gb|EPS59538.1| hypothetical protein M569_15265, partial [Genlisea aurea]
          Length = 820

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -2

Query: 403 RPGLPERALMWGQKLSQVSFPFNDITYKVLDQAYCNICQDQE--TTKETSDQRLFLDF 236
           + GL ER +MW  KL  +SF F+DITY++L+ AY ++ ++ E  ++KE   + LFLDF
Sbjct: 762 KQGLAERTIMWAHKLRDISFEFDDITYEILENAYRDLEREVECSSSKEVRGKGLFLDF 819


Top