BLASTX nr result

ID: Sinomenium22_contig00023872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00023872
         (279 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   152   6e-35
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              152   6e-35
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   151   1e-34
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   149   3e-34
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   149   3e-34
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   149   3e-34
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   149   3e-34
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   149   4e-34
ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-...   148   9e-34
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   148   9e-34
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-...   148   9e-34
gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   145   4e-33
gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   145   4e-33
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   145   4e-33
ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis tha...   142   4e-32
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   142   4e-32
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali...   142   4e-32
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   142   4e-32
ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis ...   142   4e-32
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ...   142   4e-32

>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/92 (83%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGL L+DH+SRLK R+G +PTDE++A SLR+S AELQSKLIE S AREKLAMSNVRLVM
Sbjct: 208 KAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVM 267

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 268 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 299


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/92 (83%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGL L+DH+SRLK R+G +PTDE++A SLR+S AELQSKLIE S AREKLAMSNVRLVM
Sbjct: 266 KAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVM 325

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 326 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 357


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  151 bits (381), Expect = 1e-34
 Identities = 77/92 (83%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSL+DH+SRLK RLG DP+DE++ATSL++S AELQSK I  S AREKLAMSNVRLVM
Sbjct: 219 KAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVM 278

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 279 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 310


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/92 (81%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           +AGLS +DH+SRLK RLG +P+DE++A SLR+S A+LQSKLI+ S AREKLAMSNVRLVM
Sbjct: 220 RAGLSFEDHKSRLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVM 279

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 280 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 311


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/92 (81%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSL++HR RLK RLG +P+DE+LATSL++S AEL+SKLIE S AREKLAMSNVRLVM
Sbjct: 219 KAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVM 278

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEM+DL+QGGLIGLLRGIEKFD
Sbjct: 279 SIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFD 310


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/92 (81%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSL++HR RLK RLG +P+DE+LATSL++S AEL+SKLIE S AREKLAMSNVRLVM
Sbjct: 219 KAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVM 278

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEM+DL+QGGLIGLLRGIEKFD
Sbjct: 279 SIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFD 310


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/92 (81%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           +AGLS +DH+SRLK RLG +P+DE++A SLR+S A+LQSKLI+ S AREKLAMSNVRLVM
Sbjct: 220 RAGLSFEDHKSRLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVM 279

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 280 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 311


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
           gi|462415485|gb|EMJ20222.1| hypothetical protein
           PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  149 bits (376), Expect = 4e-34
 Identities = 74/92 (80%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K GLS+++H+SRLK RLG +P+DE+LATSLR+S A+LQSKLIE   AREKLAMSNVRLVM
Sbjct: 223 KVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVM 282

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADL+QGGLIGLLRGIEKFD
Sbjct: 283 SIAQRYDNMGAEMADLIQGGLIGLLRGIEKFD 314


>ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126947|ref|XP_004499503.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 513

 Score =  148 bits (373), Expect = 9e-34
 Identities = 73/92 (79%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSLD+H+SRLK RLG +P+D+++ATSL++S AEL++K+IE S AREKL MSNVRLVM
Sbjct: 224 KAGLSLDEHKSRLKERLGCEPSDDQVATSLKISRAELRAKIIECSLAREKLTMSNVRLVM 283

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 284 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 315


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
           arietinum]
          Length = 513

 Score =  148 bits (373), Expect = 9e-34
 Identities = 73/92 (79%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSLD+H+SRLK RLG +P+D+++ATSL++S AEL++K+IE S AREKL MSNVRLVM
Sbjct: 224 KAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVM 283

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 284 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 315


>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 514

 Score =  148 bits (373), Expect = 9e-34
 Identities = 73/92 (79%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGLSLD+H+SRLK RLG +P+D+++ATSL++S AEL++K+IE S AREKL MSNVRLVM
Sbjct: 225 KAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVM 284

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADLVQGGLIGLLRGIEKFD
Sbjct: 285 SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 316


>gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
           gi|604346415|gb|EYU44878.1| hypothetical protein
           MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 520

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGL L+D RSRLK RLG +P+DE+LATSL++S A+LQSKLIE S AREKLAMSN+RLVM
Sbjct: 231 KAGLLLEDRRSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSNIRLVM 290

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YD+MGAEMADL+QGGLIGLLRGIEK+D
Sbjct: 291 SIAQRYDHMGAEMADLIQGGLIGLLRGIEKYD 322


>gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 523

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           KAGL L+D RSRLK RLG +P+DE+LATSL++S A+LQSKLIE S AREKLAMSN+RLVM
Sbjct: 231 KAGLLLEDRRSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSNIRLVM 290

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YD+MGAEMADL+QGGLIGLLRGIEK+D
Sbjct: 291 SIAQRYDHMGAEMADLIQGGLIGLLRGIEKYD 322


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
           gi|548832002|gb|ERM94804.1| hypothetical protein
           AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  145 bits (367), Expect = 4e-33
 Identities = 71/92 (77%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           +AGLSL++H+SRLK +LG+DP+DE LA+SL++S +EL SKLIE S A+EKLAMSN+RLVM
Sbjct: 208 RAGLSLEEHKSRLKEKLGFDPSDELLASSLKISRSELHSKLIECSLAKEKLAMSNIRLVM 267

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQKYDNMG EMADL+QGGLIGLLRGIEKFD
Sbjct: 268 SIAQKYDNMGIEMADLIQGGLIGLLRGIEKFD 299


>ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|75098242|sp|O24629.1|SIGA_ARATH RecName: Full=RNA
           polymerase sigma factor sigA; Short=Sigma factor A;
           Short=Sigma-A; AltName: Full=RNA polymerase sigma factor
           sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
           Full=RNA polymerase sigma factor sig2; Short=Atsig2;
           Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
           factor sigB; Short=Sigma factor B; Short=Sigma-B; Flags:
           Precursor gi|5042421|gb|AAD38260.1|AC006193_16 RNA
           polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|2353171|gb|AAB69384.1| sigma factor 1 [Arabidopsis
           thaliana] gi|2443408|dbj|BAA22421.1| SigA [Arabidopsis
           thaliana] gi|2558514|emb|CAA74640.1| plastid RNA
           polymerase sigma factor [Arabidopsis thaliana]
           gi|5478439|dbj|BAA82448.1| sigma factor SigA
           [Arabidopsis thaliana] gi|17064900|gb|AAL32604.1| RNA
           polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|20259916|gb|AAM13305.1| RNA polymerase sigma subunit
           1 [Arabidopsis thaliana] gi|222423019|dbj|BAH19492.1|
           AT1G64860 [Arabidopsis thaliana]
           gi|332196177|gb|AEE34298.1| RNA polymerase sigma subunit
           1 [Arabidopsis thaliana]
          Length = 502

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K+GL LDDH+SRLK+RLG +P+DE+LA SL++S AELQ+ L+E   AREKLAMSNVRLVM
Sbjct: 213 KSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVM 272

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDN+GAEM+DLVQGGLIGLLRGIEKFD
Sbjct: 273 SIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFD 304


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
           subsp. vesca]
          Length = 511

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 83/92 (90%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K GLS+++H+SRLK +LG +P+ E+LATSLR+S  ELQSKLI+ S AREKL MSNVRLVM
Sbjct: 222 KIGLSVEEHKSRLKEKLGCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVM 281

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDNMGAEMADL+QGGLIGLLRGIEKFD
Sbjct: 282 SIAQRYDNMGAEMADLIQGGLIGLLRGIEKFD 313


>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
          Length = 502

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K+GL LDDH+SRLK+RLG +P+DE+LA SL++S AELQ+ L+E   AREKLAMSNVRLVM
Sbjct: 213 KSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVM 272

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDN+GAEM+DLVQGGLIGLLRGIEKFD
Sbjct: 273 SIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFD 304


>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 502

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K+GL LDDH+SRLK+RLG +P+DE+LA SL++S AELQ+ L+E   AREKLAMSNVRLVM
Sbjct: 213 KSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVM 272

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDN+GAEM+DLVQGGLIGLLRGIEKFD
Sbjct: 273 SIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFD 304


>ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|332196178|gb|AEE34299.1| RNA polymerase sigma subunit
           1 [Arabidopsis thaliana]
          Length = 498

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K+GL LDDH+SRLK+RLG +P+DE+LA SL++S AELQ+ L+E   AREKLAMSNVRLVM
Sbjct: 213 KSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVM 272

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDN+GAEM+DLVQGGLIGLLRGIEKFD
Sbjct: 273 SIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFD 304


>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 503

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 3   KAGLSLDDHRSRLKNRLGYDPTDEELATSLRLSHAELQSKLIESSFAREKLAMSNVRLVM 182
           K+GL LDDH+SRLK+RLG +P+DE+LA SL++S AELQ+ L+E   AREKLAMSNVRLVM
Sbjct: 214 KSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVM 273

Query: 183 SIAQKYDNMGAEMADLVQGGLIGLLRGIEKFD 278
           SIAQ+YDN+GAEM+DLVQGGLIGLLRGIEKFD
Sbjct: 274 SIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFD 305


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