BLASTX nr result
ID: Sinomenium22_contig00023717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00023717
(897 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB87375.1| Serine hydroxymethyltransferase 1 [Morus notabilis] 48 9e-08
ref|XP_007042256.1| Serine hydroxymethyltransferase 6 isoform 2 ... 47 7e-07
ref|XP_007042255.1| Serine hydroxymethyltransferase 6 isoform 1 ... 47 7e-07
ref|XP_007042257.1| Serine hydroxymethyltransferase 6 isoform 3 ... 47 8e-07
ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1... 40 2e-06
ref|XP_004485486.1| PREDICTED: serine hydroxymethyltransferase 1... 42 4e-06
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr... 44 5e-06
>gb|EXB87375.1| Serine hydroxymethyltransferase 1 [Morus notabilis]
Length = 592
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +3
Query: 561 VTSPSKQASLGFSSHASPVPRDPVLEDSVSLQMNSSLRD----TAIPLQLFEEPRGRG 722
++ P SLGFSS ASP + + +DS+ LQ++SSLRD T +PLQL E G
Sbjct: 3 LSHPRSTLSLGFSSQASPPTKTQIADDSIFLQLDSSLRDHYSVTPVPLQLLEPQAEHG 60
Score = 35.4 bits (80), Expect(2) = 9e-08
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 743 EGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCT----RNSTAEPLLEAR 880
E + E ILGH MC+KRRRD SSSS CT + + P LEAR
Sbjct: 78 EDDREVEEFRILGHSMCLKRRRDS--ESSSSSCTTGFPKRVSFGPDLEAR 125
>ref|XP_007042256.1| Serine hydroxymethyltransferase 6 isoform 2 [Theobroma cacao]
gi|508706191|gb|EOX98087.1| Serine
hydroxymethyltransferase 6 isoform 2 [Theobroma cacao]
Length = 626
Score = 47.0 bits (110), Expect(2) = 7e-07
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 731 WRKREGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAEPLLEARR 883
+ + E + E ILGHPMC+KRRRD +SSSS T+ T EP LE R+
Sbjct: 77 YNEDEESKEMEEFHILGHPMCLKRRRDSC-SSSSSSSTKRMTVEPDLETRK 126
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 564 TSPSKQASLGFSSHASPVPRDPVLEDSVSLQMNSSLRDTA-----IPLQLFE 704
T S SLG S + P R +++DS++LQ+++ RDT +PLQL E
Sbjct: 8 TDTSSTLSLGLVSPSPPSHRSQIVDDSITLQLDT--RDTTHPVPPVPLQLLE 57
>ref|XP_007042255.1| Serine hydroxymethyltransferase 6 isoform 1 [Theobroma cacao]
gi|508706190|gb|EOX98086.1| Serine
hydroxymethyltransferase 6 isoform 1 [Theobroma cacao]
Length = 596
Score = 47.0 bits (110), Expect(2) = 7e-07
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 731 WRKREGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAEPLLEARR 883
+ + E + E ILGHPMC+KRRRD +SSSS T+ T EP LE R+
Sbjct: 77 YNEDEESKEMEEFHILGHPMCLKRRRDSC-SSSSSSSTKRMTVEPDLETRK 126
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 564 TSPSKQASLGFSSHASPVPRDPVLEDSVSLQMNSSLRDTA-----IPLQLFE 704
T S SLG S + P R +++DS++LQ+++ RDT +PLQL E
Sbjct: 8 TDTSSTLSLGLVSPSPPSHRSQIVDDSITLQLDT--RDTTHPVPPVPLQLLE 57
>ref|XP_007042257.1| Serine hydroxymethyltransferase 6 isoform 3 [Theobroma cacao]
gi|508706192|gb|EOX98088.1| Serine
hydroxymethyltransferase 6 isoform 3 [Theobroma cacao]
Length = 560
Score = 47.0 bits (110), Expect(2) = 8e-07
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 731 WRKREGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAEPLLEARR 883
+ + E + E ILGHPMC+KRRRD +SSSS T+ T EP LE R+
Sbjct: 77 YNEDEESKEMEEFHILGHPMCLKRRRDSC-SSSSSSSTKRMTVEPDLETRK 126
Score = 33.5 bits (75), Expect(2) = 8e-07
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 564 TSPSKQASLGFSSHASPVPRDPVLEDSVSLQMNSSLRDTA-----IPLQLFE 704
T S SLG S + P R +++DS++LQ+++ RDT +PLQL E
Sbjct: 8 TDTSSTLSLGLVSPSPPSHRSQIVDDSITLQLDT--RDTTHPVPPVPLQLLE 57
>ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 584
Score = 40.0 bits (92), Expect(2) = 2e-06
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 585 SLGFSSHASPVPRDPVLEDSVSLQMNSSLRD-----TAIPLQLFEE 707
SLGF SH+S P P+ +DSV LQ+ S ++PLQLFE+
Sbjct: 11 SLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQ 56
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +2
Query: 755 KSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAEPLLEARR 883
+ E ILGHPMC+KR RDE F+ SSS ++ + E LE RR
Sbjct: 73 EDEEFHILGHPMCLKRPRDEQFSRSSS-PSKVALVESGLEQRR 114
>ref|XP_004485486.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum]
Length = 587
Score = 41.6 bits (96), Expect(2) = 4e-06
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Frame = +3
Query: 519 THNQSTLGLIIKPTVTSPSKQASLGFSSHASPVPRDPVLEDSVSLQMNSSLRDTA----- 683
+H+QS L L SSH SP R P+ +DS+SL + SS RD +
Sbjct: 4 SHHQSNLSLTFS--------------SSHVSPPRRPPIPDDSISLHLESSFRDPSHPVPT 49
Query: 684 IPLQLF----EEPRGRGGFD 731
+PLQL E+ G GG D
Sbjct: 50 VPLQLMEPQTEKENGCGGVD 69
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 743 EGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAEPLLEARR 883
E + E ILGH MC+KRRRD SS++ T+ ++ E LE+R+
Sbjct: 76 EDDREVEEFRILGHSMCLKRRRD---CESSTIITKRASVERDLESRK 119
>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|355482048|gb|AES63251.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 593
Score = 43.9 bits (102), Expect(2) = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 6/46 (13%)
Frame = +3
Query: 585 SLGFSS-HASPVPRDPVLEDSVSLQMNSSLRDTA-----IPLQLFE 704
SL FSS HASP PR P+ +DS++L + SS RD + +PLQL E
Sbjct: 11 SLNFSSSHASPPPRPPIPDDSIALHLESSFRDPSNPVPTVPLQLME 56
Score = 33.9 bits (76), Expect(2) = 5e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 743 EGKMKSRERGILGHPMCVKRRRDEAFTSSSSLCTRNSTAE 862
E + E ILGH MC+KRRRD + SS++ T+ ++ E
Sbjct: 75 EDDREVEEFRILGHSMCIKRRRD---SESSTITTKRASVE 111