BLASTX nr result

ID: Sinomenium22_contig00023672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00023672
         (1165 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]    61   8e-07
dbj|BAD33810.1| pentatricopeptide (PPR) repeat-containing protei...    61   1e-06
emb|CBI20759.3| unnamed protein product [Vitis vinifera]               58   7e-06
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-06

>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 133 NNLQAAVRVEVLSGCTNSMLSPYLLPQVSLSDPIEDIMIPFEE 5
           N+ Q AVR+E L G T SM SPYLLPQVS +DPIE+IM+PFEE
Sbjct: 405 NDGQVAVRLEALLGFTRSMFSPYLLPQVSPADPIENIMMPFEE 447


>dbj|BAD33810.1| pentatricopeptide (PPR) repeat-containing protein / CBS
           domain-containing protein-like [Oryza sativa Japonica
           Group] gi|50726328|dbj|BAD33918.1| pentatricopeptide
           (PPR) repeat-containing protein / CBS domain-containing
           protein-like [Oryza sativa Japonica Group]
          Length = 564

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -1

Query: 133 NNLQAAVRVEVLSGCTNSMLSPYLLPQVSLSDPIEDIMIPFEET 2
           NN Q AV+VE LSG TNS+L P++ PQ+ L+DP+E  MIPF+ET
Sbjct: 416 NNNQVAVKVETLSGFTNSLLRPHVFPQIVLNDPVEKYMIPFQET 459


>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -1

Query: 118 AVRVEVLSGCTNSMLSPYLLPQVSLSDPIEDIMIPFEE 5
           AVR+E L G T SM SPYLLPQVS +DPIE+IM+PFEE
Sbjct: 453 AVRLEALLGFTRSMFSPYLLPQVSPADPIENIMMPFEE 490


>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -1

Query: 118 AVRVEVLSGCTNSMLSPYLLPQVSLSDPIEDIMIPFEE 5
           AVR+E L G T SM SPYLLPQVS +DPIE+IM+PFEE
Sbjct: 436 AVRLEALLGFTRSMFSPYLLPQVSPADPIENIMMPFEE 473


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