BLASTX nr result

ID: Sinomenium22_contig00023367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00023367
         (347 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   103   2e-20
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   102   5e-20
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   102   5e-20
ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik...   101   1e-19
ref|XP_007014570.1| Pseudouridine synthase family protein isofor...    98   1e-18
ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma ...    98   1e-18
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...    98   1e-18
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...    98   1e-18
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...    98   1e-18
emb|CBI33811.3| unnamed protein product [Vitis vinifera]               97   3e-18
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...    94   2e-17
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...    94   2e-17
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]         94   3e-17
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...    89   5e-16
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...    88   1e-15
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...    88   1e-15
ref|XP_006403086.1| hypothetical protein EUTSA_v10003453mg [Eutr...    86   4e-15
ref|NP_198390.2| Pseudouridine synthase family protein [Arabidop...    86   5e-15
ref|NP_001190423.1| Pseudouridine synthase family protein [Arabi...    86   5e-15
gb|ADE76416.1| unknown [Picea sitchensis]                              85   1e-14

>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score =  103 bits (257), Expect = 2e-20
 Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLND-EEEEQIDESDMVMRIPAGMNSIMTR*MDA 179
           VISVSEVSRVFHPNFSAKWRRY YIFP+ND E+ EQ  +S+ +  + +       R    
Sbjct: 221 VISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSYEKYDEQR-NGC 279

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
             L +   V+ L+ +    L+  KKPR FSI RVNQLL QLE K LSYK+FA DTK
Sbjct: 280 AELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKLLSYKIFARDTK 335


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
           gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 457

 Score =  102 bits (254), Expect = 5e-20
 Identities = 60/116 (51%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLND-EEEEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V S+SEVSR FHPNFSAKWRRY YIFPLND E  E+I+    +    +  N    R  + 
Sbjct: 235 VESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCEKQR-NEC 293

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
             L +   V+  +++    L+  KKPR FS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 294 GELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTK 349


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
           gi|550318755|gb|ERP50021.1| hypothetical protein
           POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  102 bits (254), Expect = 5e-20
 Identities = 60/116 (51%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLND-EEEEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V S+SEVSR FHPNFSAKWRRY YIFPLND E  E+I+    +    +  N    R  + 
Sbjct: 226 VESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCEKQR-NEC 284

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
             L +   V+  +++    L+  KKPR FS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 285 GELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTK 340


>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 410

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
 Frame = +3

Query: 6   ISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQIDESD-----MVMRIPAG--MNSIMT 164
           +SV+EVSRVFHPNFSAKWRRY YIFP ND+EE++   +D      +++I      + +++
Sbjct: 186 VSVTEVSRVFHPNFSAKWRRYLYIFPFNDDEEDREQSNDTGENAQILKIKENHHEHEVVS 245

Query: 165 R*MDAVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDT 344
                 N+  T   D +       L+ EKKP+ FS+ RVN+LL +LE K LSYKMFA DT
Sbjct: 246 DNCSEANVGNTNITDDV------GLEAEKKPQMFSVSRVNKLLQKLEGKLLSYKMFARDT 299

Query: 345 K 347
           K
Sbjct: 300 K 300


>ref|XP_007014570.1| Pseudouridine synthase family protein isoform 4, partial [Theobroma
           cacao] gi|508784933|gb|EOY32189.1| Pseudouridine
           synthase family protein isoform 4, partial [Theobroma
           cacao]
          Length = 349

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/116 (49%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE-EEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V+SVSEVSRVFHPNFSAKWR Y YIFPL+++E E+Q  E+   +       +   +    
Sbjct: 221 VVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGY 280

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
           +  +    V+ L+++    L+   KP RFS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 281 LENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTK 336


>ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma cacao]
           gi|508784932|gb|EOY32188.1| Pseudouridine synthase
           isoform 3 [Theobroma cacao]
          Length = 303

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/116 (49%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE-EEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V+SVSEVSRVFHPNFSAKWR Y YIFPL+++E E+Q  E+   +       +   +    
Sbjct: 80  VVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGY 139

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
           +  +    V+ L+++    L+   KP RFS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 140 LENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTK 195


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
           gi|508784931|gb|EOY32187.1| Pseudouridine synthase
           isoform 2 [Theobroma cacao]
          Length = 446

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/116 (49%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE-EEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V+SVSEVSRVFHPNFSAKWR Y YIFPL+++E E+Q  E+   +       +   +    
Sbjct: 221 VVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGY 280

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
           +  +    V+ L+++    L+   KP RFS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 281 LENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTK 336


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
           gi|508784930|gb|EOY32186.1| Pseudouridine synthase
           isoform 1 [Theobroma cacao]
          Length = 444

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/116 (49%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE-EEQIDESDMVMRIPAGMNSIMTR*MDA 179
           V+SVSEVSRVFHPNFSAKWR Y YIFPL+++E E+Q  E+   +       +   +    
Sbjct: 221 VVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGY 280

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
           +  +    V+ L+++    L+   KP RFS+ RVNQLL QLE K LSYKMFA DTK
Sbjct: 281 LENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTK 336


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 59/117 (50%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEE-EQIDESDM-VMRIPAGMNSIMTR*MD 176
           VISVSEVSR+FHPNFSAKWR YFYIFPLND ++ EQI E++M + +I             
Sbjct: 209 VISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEMDIQKISFNEKYGEQGSEC 268

Query: 177 AVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
                     + L+       +  KKP  FSI RV+QLL QLE K LSYK+FA DTK
Sbjct: 269 PAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTK 325


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 59/117 (50%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLND-EEEEQIDESDM-VMRIPAGMNSIMTR*MD 176
           VISVSEVSR+FHPNFSAKWR YFYIFPLND ++ EQI E++M + +I    N        
Sbjct: 209 VISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEMDIQKISFNEN-------- 260

Query: 177 AVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
                                   KKP  FSI RV+QLL QLE K LSYK+FA DTK
Sbjct: 261 -----------------------RKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTK 294


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 58/117 (49%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE--EEQIDESDMVMRIPAGMNSIMTR*MD 176
           VISVS+VSRVFHPNFSAKWRRY YIFPLND E  E+ ID    V       N      + 
Sbjct: 234 VISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTSNN------VG 287

Query: 177 AVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
             +      ++ LL+         +KPR F+I RVN LL +LE K LSYK FA DTK
Sbjct: 288 KQSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTK 344


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
           gi|557556408|gb|ESR66422.1| hypothetical protein
           CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 58/117 (49%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE--EEQIDESDMVMRIPAGMNSIMTR*MD 176
           VISVS+VSRVFHPNFSAKWRRY YIFPLND E  E+ ID    V       N      + 
Sbjct: 227 VISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTSNN------VG 280

Query: 177 AVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
             +      ++ LL+         +KPR F+I RVN LL +LE K LSYK FA DTK
Sbjct: 281 KQSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTK 337


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
 Frame = +3

Query: 9   SVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQIDESDMVMRIPAGMNSIMTR*MDAVNL 188
           SVSEVSRVFHPNFSAKWRRY YIFP NDEE+E+    +                    NL
Sbjct: 230 SVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEEQSNKN------------------GENL 271

Query: 189 LATRKVDA------------LLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMF 332
               K+++            L++     L+  KKP  FS+ RV+QLL  LE K LSYKMF
Sbjct: 272 ETYEKIESGCGEWNDESFGNLIIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMF 331

Query: 333 AWDTK 347
           A DTK
Sbjct: 332 ARDTK 336


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
           gi|462419663|gb|EMJ23926.1| hypothetical protein
           PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 54/116 (46%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEE-EQIDESDMVMRIPAGMNSIMTR*MDA 179
           V+SV+EVSR FHPNF+AKWR Y YIFP NDEE+ EQ ++S    +    + +      + 
Sbjct: 186 VVSVTEVSRAFHPNFTAKWRHYLYIFPFNDEEDMEQSNQSGENAQNFKSLENYHEH-KNG 244

Query: 180 VNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
            +      V  L++     L+   KPR F++ RVNQLL +LE K LSYKMFA DTK
Sbjct: 245 CDQCNEANVGNLVINDNEDLE-TLKPREFTVSRVNQLLQKLEGKLLSYKMFARDTK 299


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 58/124 (46%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
 Frame = +3

Query: 9   SVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQID----------ESDMVMRIPAGMNSI 158
           SVS+VSR+FHPNFSAKWRRY YI PLND E  + D          E +  ++I A     
Sbjct: 221 SVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGE- 279

Query: 159 MTR*MDAVNLLATRKVDALLLT-MVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFA 335
             + +D ++       D L+L+   + L    KP+ FSI RVNQLL +LE K LSYKMFA
Sbjct: 280 --KCVDGIH-------DNLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFA 330

Query: 336 WDTK 347
            DTK
Sbjct: 331 RDTK 334


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 58/124 (46%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
 Frame = +3

Query: 9   SVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQID----------ESDMVMRIPAGMNSI 158
           SVS+VSR+FHPNFSAKWRRY YI PLND E  + D          E +  ++I A     
Sbjct: 221 SVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGE- 279

Query: 159 MTR*MDAVNLLATRKVDALLLTMV-RALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFA 335
             + +D ++       D L+L+     L    KP+ FSI RVNQLL +LE K LSYKMFA
Sbjct: 280 --KCVDGIH-------DNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFA 330

Query: 336 WDTK 347
            DTK
Sbjct: 331 RDTK 334


>ref|XP_006403086.1| hypothetical protein EUTSA_v10003453mg [Eutrema salsugineum]
           gi|557104193|gb|ESQ44539.1| hypothetical protein
           EUTSA_v10003453mg [Eutrema salsugineum]
          Length = 420

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEE--EEQIDESDMVMRIPAG--MNSIMTR* 170
           V+S+S+VSR FHPNFSAKWRRY YIFPL++ E  E      + +     G   N +++  
Sbjct: 195 VVSISKVSRAFHPNFSAKWRRYLYIFPLDNAEPCESGKTRENFIFHENHGKQRNGLLSE- 253

Query: 171 MDAVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMFAWDTK 347
            +   +    +++      V  L++ +KP  FS+ +V+QLL QL+ K LSYKMFA DTK
Sbjct: 254 EETEGVSEDDELEIDETEKVNGLQVVEKPSEFSVSKVDQLLQQLQGKLLSYKMFARDTK 312


>ref|NP_198390.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|27311599|gb|AAO00765.1| putative protein [Arabidopsis
           thaliana] gi|30725698|gb|AAP37871.1| At5g35400
           [Arabidopsis thaliana] gi|332006580|gb|AED93963.1|
           Pseudouridine synthase family protein [Arabidopsis
           thaliana]
          Length = 420

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQ----------IDESDMVMRIPAGMN 152
           V+S+S+VSR FHPNFSAKWRRY YIFPL+D E  +           DE+    R     N
Sbjct: 194 VVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKKQR-----N 248

Query: 153 SIMTR*MDAVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMF 332
            +++  + A  ++ +   +  +     AL++ +KP  FS+ +V+QLL  L+ K LSYKMF
Sbjct: 249 GLLSEEI-AEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMF 307

Query: 333 AWDTK 347
           A DTK
Sbjct: 308 ARDTK 312


>ref|NP_001190423.1| Pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|332006581|gb|AED93964.1| Pseudouridine synthase
           family protein [Arabidopsis thaliana]
          Length = 471

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQ----------IDESDMVMRIPAGMN 152
           V+S+S+VSR FHPNFSAKWRRY YIFPL+D E  +           DE+    R     N
Sbjct: 194 VVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKKQR-----N 248

Query: 153 SIMTR*MDAVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMF 332
            +++  + A  ++ +   +  +     AL++ +KP  FS+ +V+QLL  L+ K LSYKMF
Sbjct: 249 GLLSEEI-AEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMF 307

Query: 333 AWDTK 347
           A DTK
Sbjct: 308 ARDTK 312


>gb|ADE76416.1| unknown [Picea sitchensis]
          Length = 448

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
 Frame = +3

Query: 3   VISVSEVSRVFHPNFSAKWRRYFYIFPLNDEEEEQ--------IDESDMVMRIPAGMNS- 155
           V+S+SEVSR FHPNFSAKWRRY YI PL D E  +        +    + +    G  S 
Sbjct: 225 VVSISEVSREFHPNFSAKWRRYLYILPLKDGEGNKTVVDGGSPVTYDSLCLADEGGNQST 284

Query: 156 -IMTR*MDAVNLLATRKVDALLLTMVRALKLEKKPRRFSIGRVNQLLLQLEDKSLSYKMF 332
            +    M+A+N+ AT K  A +           KP  F++  VNQLL QLE +SLSY++F
Sbjct: 285 DMNVINMEAMNISATGKHQASV-----------KPHNFNVDTVNQLLQQLEGQSLSYRIF 333

Query: 333 AWDTK 347
           A DT+
Sbjct: 334 ARDTQ 338


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