BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00023299
         (298 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]      59   5e-07
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...    57   4e-06
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
          Length = 494

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -1

Query: 208 LRSASLTH-FRRGGRRRKLPISPYKGKWQQTFNQQAAMEAFKKATVELQQSNLLFALINS 32
           +R  SLT+ F R  + R+ PISPYK KW +TFNQ  A++  K+   E   + LL  L+NS
Sbjct: 3   IRPFSLTNKFLR--KHREFPISPYKTKWHETFNQTQALQTLKRHQNE-NPNRLLSLLLNS 59

Query: 31  FSIYACDPTP 2
           F+ Y C+PTP
Sbjct: 60  FNSYDCNPTP 69


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
 Frame = -1

Query: 220 SMVSLRSASLTHFRRGGRRRKLPISPYKGKWQQTFNQQAAMEAFKKATVELQQS------ 59
           S  S +SAS   F R  + RK P SPYK +W + FNQQ AM++ K++ ++  Q       
Sbjct: 3   SCTSKKSASF--FLR--KHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKP 58

Query: 58  NLLFALINSFSIYACDPTP 2
           +LL +LI+SFSIY  +P P
Sbjct: 59  HLLSSLIHSFSIYDVEPAP 77


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -1

Query: 169 RRRKLPISPYKGKWQQTFNQQAAMEAFKKATVELQQSNLLFALINSFSIYACDPTP 2
           + RK P+S +K KW QTF+Q  A+   K+A    Q   LL AL+ SF+ Y+C PTP
Sbjct: 17  KHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVTSFTAYSCHPTP 72