BLASTX nr result
ID: Sinomenium22_contig00023143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00023143
(795 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s... 124 3e-26
ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9... 121 3e-25
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera] 121 3e-25
ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citr... 119 1e-24
ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III s... 117 4e-24
gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Mor... 116 8e-24
gb|AFK37258.1| unknown [Lotus japonicus] 108 2e-21
ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phas... 106 9e-21
ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutr... 106 9e-21
gb|AFK40316.1| unknown [Lotus japonicus] 106 1e-20
ref|XP_002525535.1| conserved hypothetical protein [Ricinus comm... 105 1e-20
ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Popu... 105 2e-20
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s... 104 4e-20
dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana] 103 6e-20
ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidop... 103 6e-20
ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Caps... 103 7e-20
ref|XP_004503964.1| PREDICTED: DNA-directed RNA polymerase III s... 102 1e-19
ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Caps... 102 1e-19
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s... 102 2e-19
ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526... 101 3e-19
>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
product [Vitis vinifera]
Length = 156
Score = 124 bits (312), Expect = 3e-26
Identities = 69/124 (55%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRSRGA+ DPTRVIA +A SEF+VYDYL++SAAC+QTRESINE L KC+K++LAKAE LN
Sbjct: 20 LRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCENXXXXXXXXXXETNEAQVIQDQAVKPD--DTDGDKVAQDQ 354
I+NIRP+S VEIDPIIE+ E E VI P+ +T+ + VA D+
Sbjct: 80 IINIRPASPVEIDPIIEESEKRMGEGIEDLIE----MVITVLPPPPNQMNTEEEVVAGDE 135
Query: 355 ELME 366
E+ +
Sbjct: 136 EIAD 139
>ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9 [Theobroma cacao]
gi|508713887|gb|EOY05784.1| DNA-directed RNA polymerase
III subunit RPC9 [Theobroma cacao]
Length = 245
Score = 121 bits (304), Expect = 3e-25
Identities = 57/80 (71%), Positives = 70/80 (87%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRSRGAS DPTRVI +APSEF+VYDYL++SAAC+QT+E IN+FL +C+ + LAKAE LN
Sbjct: 95 LRSRGASKDPTRVIVPIAPSEFKVYDYLVESAACNQTKEHINDFLERCKNYKLAKAEVLN 154
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+N+RPS+ VEIDPIIEQ E
Sbjct: 155 IINLRPSALVEIDPIIEQSE 174
>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
Length = 388
Score = 121 bits (303), Expect = 3e-25
Identities = 59/80 (73%), Positives = 71/80 (88%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRSRGA+ D TRVIA +A SEF+VYDYL++SAAC+QTRESINE L KC+K++LAKAE LN
Sbjct: 41 LRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILN 100
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NIRP+S VEIDPIIE+ E
Sbjct: 101 IINIRPASPVEIDPIIEESE 120
>ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citrus clementina]
gi|567853814|ref|XP_006420027.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
gi|557521899|gb|ESR33266.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
gi|557521900|gb|ESR33267.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
Length = 163
Score = 119 bits (299), Expect = 1e-24
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRS+GAS DPTRV+ V PSEF+VYDYL++SAAC+QTR INEFL K +KF LAKAE LN
Sbjct: 20 LRSKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNIINEFLEKSKKFKLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NIRPSS VE+D IIEQC+
Sbjct: 80 IINIRPSSLVEVDSIIEQCD 99
>ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
isoform X1 [Citrus sinensis]
gi|568872598|ref|XP_006489454.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC9-like isoform X2 [Citrus
sinensis]
Length = 165
Score = 117 bits (294), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR +GAS DPTRV+ V PSEF+VYDYL++SAAC+QTR INEFL K +KF LAKAE LN
Sbjct: 20 LRCKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNIINEFLEKSKKFKLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NIRPSS VE+D IIEQC+
Sbjct: 80 IINIRPSSLVEVDSIIEQCD 99
>gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Morus notabilis]
Length = 163
Score = 116 bits (291), Expect = 8e-24
Identities = 61/126 (48%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L+S+GAS DPTRV+A VAPSE++VYDYL+++AAC QT+E++NEFL KC+K++LAKAE LN
Sbjct: 20 LKSKGASKDPTRVLADVAPSEYKVYDYLVETAACDQTKENVNEFLEKCKKYDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCENXXXXXXXXXXETNEAQVIQDQAVKPD----DTDGDKVAQ 348
I+NIR S+ VEI I+E CE +T A+V+ +P + + D+
Sbjct: 80 IINIRASTAVEIYLIVEDCEKRLGDDVDELVKT-VAEVLPPAPTEPASEEVNNEADEKTA 138
Query: 349 DQELME 366
DQ + E
Sbjct: 139 DQNINE 144
>gb|AFK37258.1| unknown [Lotus japonicus]
Length = 162
Score = 108 bits (271), Expect = 2e-21
Identities = 53/81 (65%), Positives = 68/81 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR +GAS DPTRVIA VA SE++VYDYL+ +AA +QTRESINEF+ +K +LAKAE LN
Sbjct: 20 LRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCEN 243
I+NIRP++ VE+ PIIE+CE+
Sbjct: 80 IINIRPAAAVEMFPIIEECES 100
>ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phaseolus vulgaris]
gi|561036857|gb|ESW35387.1| hypothetical protein
PHAVU_001G230900g [Phaseolus vulgaris]
Length = 154
Score = 106 bits (265), Expect = 9e-21
Identities = 58/119 (48%), Positives = 77/119 (64%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR++GAS DPTRVIA V SE++VYDYL+ +AA QTRESINEFL ++ +LAKAE LN
Sbjct: 20 LRAKGASKDPTRVIAKVEQSEYKVYDYLVDTAASDQTRESINEFLTCIKRHDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCENXXXXXXXXXXETNEAQVIQDQAVKPDDTDGDKVAQDQE 357
I+N RP+SEVEI PIIE CE T +++ P + +++ +D E
Sbjct: 80 ILNTRPTSEVEIFPIIESCEGRFPDEEV----TEIVELVTKTLPPPPEMKQEEITKDDE 134
>ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutrema salsugineum]
gi|557090971|gb|ESQ31618.1| hypothetical protein
EUTSA_v10005100mg [Eutrema salsugineum]
Length = 140
Score = 106 bits (265), Expect = 9e-21
Identities = 52/81 (64%), Positives = 66/81 (81%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L SRGAS D TRVIA +A SE++VYDYL+++AAC+QTRES+NEF KC+ F + KAE LN
Sbjct: 20 LNSRGASRDTTRVIAPIAKSEYKVYDYLVETAACTQTRESVNEFADKCKAFKVWKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCEN 243
I+N+RPSS VE+ PIIE +N
Sbjct: 80 IINLRPSSIVELMPIIETPDN 100
>gb|AFK40316.1| unknown [Lotus japonicus]
Length = 162
Score = 106 bits (264), Expect = 1e-20
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR +GAS DPTRVIA VA SE++VYDYL+ +AA +QTRESINEF+ +K +LAKAE LN
Sbjct: 20 LRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NI P++ VE+ PIIE+CE
Sbjct: 80 IINITPAAAVEMFPIIEECE 99
>ref|XP_002525535.1| conserved hypothetical protein [Ricinus communis]
gi|223535214|gb|EEF36893.1| conserved hypothetical
protein [Ricinus communis]
Length = 138
Score = 105 bits (263), Expect = 1e-20
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L++RGA D +RVIA VAPSE++VYDYL+++ AC QTRE INEF+ KC+ + LAKAE LN
Sbjct: 20 LKARGAGKDSSRVIAPVAPSEYKVYDYLMETPACRQTREQINEFMEKCKAYKLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NI P VE+DPIIE+ E
Sbjct: 80 IINIVPRELVELDPIIEKSE 99
>ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Populus trichocarpa]
gi|222855719|gb|EEE93266.1| hypothetical protein
POPTR_0005s06860g [Populus trichocarpa]
Length = 159
Score = 105 bits (262), Expect = 2e-20
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRSRGAS D +RV+A VA SE++VYDYL+++ AC+ TRE INEFL +C+K++LAKAE LN
Sbjct: 20 LRSRGASRDVSRVLAPVAASEYKVYDYLVETPACNLTREKINEFLERCKKYDLAKAELLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCEN 243
I+NIRPS VEI IIE+ ++
Sbjct: 80 IINIRPSQTVEIYTIIEEMDS 100
>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
[Glycine max]
Length = 161
Score = 104 bits (259), Expect = 4e-20
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR++GAS DPTRVIA VA SE++VYDYL+ +AA QTRESINEFL ++ +LAKAE LN
Sbjct: 20 LRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESINEFLTSVKQHDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NI P++EVE+ PIIE C+
Sbjct: 80 ILNIGPAAEVELYPIIEDCD 99
>dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]
Length = 166
Score = 103 bits (258), Expect = 6e-20
Identities = 52/81 (64%), Positives = 66/81 (81%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L SRGAS D TRVIA +A SE++VYDYL+++AA +QTRESIN+F KC+ F LAKAE LN
Sbjct: 47 LNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESINKFADKCKDFKLAKAEILN 106
Query: 181 IVNIRPSSEVEIDPIIEQCEN 243
I+N+RPSS VE+ PIIE ++
Sbjct: 107 IINLRPSSIVELLPIIENLDD 127
>ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|334188590|ref|NP_001190602.1| RNA polymerase II,
Rpb4, core protein [Arabidopsis thaliana]
gi|32815911|gb|AAP88340.1| At5g62950 [Arabidopsis
thaliana] gi|110743157|dbj|BAE99470.1| hypothetical
protein [Arabidopsis thaliana]
gi|332010294|gb|AED97677.1| RNA polymerase II, Rpb4,
core protein [Arabidopsis thaliana]
gi|332010296|gb|AED97679.1| RNA polymerase II, Rpb4,
core protein [Arabidopsis thaliana]
Length = 139
Score = 103 bits (258), Expect = 6e-20
Identities = 52/81 (64%), Positives = 66/81 (81%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L SRGAS D TRVIA +A SE++VYDYL+++AA +QTRESIN+F KC+ F LAKAE LN
Sbjct: 20 LNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESINKFADKCKDFKLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCEN 243
I+N+RPSS VE+ PIIE ++
Sbjct: 80 IINLRPSSIVELLPIIENLDD 100
>ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Capsella rubella]
gi|482549981|gb|EOA14175.1| hypothetical protein
CARUB_v10027325mg [Capsella rubella]
Length = 145
Score = 103 bits (257), Expect = 7e-20
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L SRGAS D TRVIA +A SE++VYDYLL++AA +QTRES+N+F KC+ F +AKAE LN
Sbjct: 20 LNSRGASKDTTRVIAPIAISEYKVYDYLLETAASTQTRESVNKFADKCKDFKVAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIE 231
I+N+RPSS+V++ PIIE
Sbjct: 80 IINLRPSSKVDLAPIIE 96
>ref|XP_004503964.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
isoform X1 [Cicer arietinum]
gi|502139909|ref|XP_004503965.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC9-like isoform X2 [Cicer
arietinum] gi|502139911|ref|XP_004503966.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC9-like
isoform X3 [Cicer arietinum]
gi|502139913|ref|XP_004503967.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC9-like isoform X4 [Cicer
arietinum] gi|502139915|ref|XP_004503968.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC9-like
isoform X5 [Cicer arietinum]
gi|502139917|ref|XP_004503969.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC9-like isoform X6 [Cicer
arietinum] gi|502139919|ref|XP_004503970.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC9-like
isoform X7 [Cicer arietinum]
Length = 152
Score = 102 bits (255), Expect = 1e-19
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR++GAS DPTRVIA VA SE++VYDYL+ +AAC QTRES+NEFL ++F ++KAE LN
Sbjct: 20 LRAKGASKDPTRVIAKVALSEYKVYDYLVNTAACCQTRESVNEFLTAIKQFEVSKAEMLN 79
Query: 181 IVNIRPSSEVEIDPIIE 231
I+NIRP+ VE+ PIIE
Sbjct: 80 ILNIRPAHPVELFPIIE 96
>ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Capsella rubella]
gi|565475100|ref|XP_006295191.1| hypothetical protein
CARUB_v10024270mg [Capsella rubella]
gi|482563898|gb|EOA28088.1| hypothetical protein
CARUB_v10024270mg [Capsella rubella]
gi|482563899|gb|EOA28089.1| hypothetical protein
CARUB_v10024270mg [Capsella rubella]
Length = 144
Score = 102 bits (255), Expect = 1e-19
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
L SRGAS D TRVIA +A SE++VYDYL+++AA +QTRES+N+F KC+ F +AKAE LN
Sbjct: 20 LNSRGASKDTTRVIAPIAISEYKVYDYLVETAASTQTRESVNKFADKCKDFKVAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIE 231
I+N+RPSS VE+ PIIE
Sbjct: 80 IINLRPSSAVELAPIIE 96
>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
[Cucumis sativus] gi|449523065|ref|XP_004168545.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc9-like [Cucumis sativus]
Length = 160
Score = 102 bits (254), Expect = 2e-19
Identities = 46/80 (57%), Positives = 67/80 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LRS+GA+ DPTRV+A V PSE++V+DYL Q++AC+QTRE+I F K ++++LAKAE LN
Sbjct: 20 LRSKGAAKDPTRVLAKVLPSEYKVFDYLNQTSACNQTREAIINFAEKSKEYDLAKAEILN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+N+RP++ VE+ P+IE C+
Sbjct: 80 IINLRPTTPVELFPVIENCD 99
>ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526847 isoform X1 [Glycine
max]
Length = 161
Score = 101 bits (252), Expect = 3e-19
Identities = 50/80 (62%), Positives = 67/80 (83%)
Frame = +1
Query: 1 LRSRGASTDPTRVIAAVAPSEFQVYDYLLQSAACSQTRESINEFLRKCEKFNLAKAEKLN 180
LR++GAS DPTRVIA V+ SE++VYDYL+ +AA QTRESINEFLR ++ +LAKAE LN
Sbjct: 20 LRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESINEFLRSVKQHDLAKAEVLN 79
Query: 181 IVNIRPSSEVEIDPIIEQCE 240
I+NI P++EVE+ PI+E+ +
Sbjct: 80 ILNIGPAAEVELYPILEESD 99