BLASTX nr result
ID: Sinomenium22_contig00023099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00023099
(311 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 89 6e-16
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 87 2e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 85 9e-15
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 83 3e-14
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 83 3e-14
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 83 3e-14
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 82 8e-14
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 81 1e-13
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 81 2e-13
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 80 2e-13
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 79 5e-13
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ... 79 7e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 79 9e-13
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 78 1e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 78 1e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 78 1e-12
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 77 2e-12
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 76 4e-12
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 75 9e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 75 9e-12
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
+SW +CKP+ EGG+GLR +KE + +KLV I S+ L VKWV+ LK++ W V
Sbjct: 413 ISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIV 472
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
KE + SW+W+K+++YR A K +GNG S +W
Sbjct: 473 KENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSFW 510
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
+SW+ +CKP+ EGG+GLR +KE + +KLV I SN L KWV ++K S+WS+
Sbjct: 507 ISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSL 566
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
K+ SW+WRK+++ R A + +GNG S +W
Sbjct: 567 KQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFW 604
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
+SW +CKP+ EGG+GLR +KE + +KLV I S+ L VKWV L+ S W V
Sbjct: 860 ISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEV 919
Query: 115 KERV-DCSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
K+ V SW+W+K+++YR A + K +GNG +W
Sbjct: 920 KQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFW 957
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
+SW+ +CKP+ EGG+GLR +KE + +K+V I S+ L VKW++ LK ++ W V
Sbjct: 817 VSWDDVCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFV 876
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
KE SW+WRK++++R +A + K + GN +W
Sbjct: 877 KENTTLGSWMWRKLIKFREKAKNFCKVEVNKGNCTSFW 914
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
R+ +SW+ ICKP+ EGG+GLR + E ++ ++KL+ + SN L VKW ++ LK++
Sbjct: 260 RRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQE 319
Query: 130 SLWSVKERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
S WS+ SW+W+K+++YR A + + NG +W
Sbjct: 320 SFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFW 362
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +CKP+ EGG+GLR +KE + +KL+ I S+ L VKW+Q LKK S W+V
Sbjct: 109 ITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAV 168
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
+E SW+WRK++++R A + K I NG +W
Sbjct: 169 RENTSLGSWMWRKILKFRDIARTLCKVEINNGARTSFW 206
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 82.0 bits (201), Expect = 8e-14
Identities = 35/97 (36%), Positives = 60/97 (61%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++WET+C+P+ EGG+GL+ +KE + +KL+ I S L V+W++ LK+++ WS
Sbjct: 378 IAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSF 437
Query: 115 KERVDCSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
+ SW+W+K+++YR A K I NG + +W
Sbjct: 438 RSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFW 474
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +CKP+ EGG+GLR +KE + +KL+ I S+ L VKW+Q LKK W+V
Sbjct: 190 IAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAV 249
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
+E SW+WRK++++R A + K I NG +W
Sbjct: 250 RENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFW 287
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +CKP+ EGG+GLR +KE + +KL+ I S+ L VKW+ LK+ S W+V
Sbjct: 242 IAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAV 301
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
+E SW+W+KV+++R A+ + K + NG +W
Sbjct: 302 RENTSLGSWMWKKVLKFRDAAIQLCKAEVNNGAHTFFW 339
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
R+ +SW+ ICKP+ +GG+GLR + E ++ ++KL+ + SN L VKW ++ LK++
Sbjct: 772 RRKAKVSWDDICKPK-QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQE 830
Query: 130 SLWSVKERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
S WS+K SW+W+K+++YR A + + NG +W
Sbjct: 831 SFWSLKPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFW 873
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
LSW +CKP+ EGG+GLR +KE + +KL+ + S+ L V+W++ LK D+ WSV
Sbjct: 277 LSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSV 336
Query: 115 KERVD-CSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
K + SW+W K+++YR A K + NG+ +W
Sbjct: 337 KATTNRGSWMWSKLIKYRDVAKEFCKVEVRNGHRTSFW 374
>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
hypothetical protein At5g13655 [Arabidopsis thaliana]
Length = 385
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +C P+ EGG+GLR V+E + ++KL+ I S K L V WV+ L+ SLW+V
Sbjct: 19 VAWSVVCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAV 78
Query: 115 KERVD-CSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
KE SW+W+K+++YR +A K + NG S +W
Sbjct: 79 KETSSRGSWIWKKLLKYRDKAKCFHKVDVRNGESTSFW 116
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 78.6 bits (192), Expect = 9e-13
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
+SW+ ICKP+ EGG+GL+ ++E + +KL+ + S + L VKW ++ LKK+S WS+
Sbjct: 581 VSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSI 640
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
SW+WR+++++R A K + NG + +W
Sbjct: 641 GTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFW 678
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
RKL ++W ICKP+ EGG+GLR ++F+ A + K+ I SN L VK ++ +++K
Sbjct: 1370 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 1429
Query: 130 SLWSVKERVDCSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
++ + +CSW WR +M+ + +K+ +GNG I +W
Sbjct: 1430 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFW 1471
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
RKL ++W ICKP+ EGG+GLR ++F+ A + K+ I SN L VK ++ +++K
Sbjct: 838 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 897
Query: 130 SLWSVKERVDCSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
++ + +CSW WR +M+ + +K+ +GNG I +W
Sbjct: 898 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
RKL ++W ICKP+ EGG+GLR ++F+ A + K+ I SN L VK ++ +++K
Sbjct: 838 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 897
Query: 130 SLWSVKERVDCSWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
++ + +CSW WR +M+ + +K+ +GNG I +W
Sbjct: 898 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/98 (33%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +C P+ EGG+G+R +KE + ++KL+ W + L V+W+++ L+K S WS+
Sbjct: 116 VAWSDVCTPKDEGGLGIRSLKEANKVSLLKLI-WRMLSSTSLWVQWLRLYLLRKGSFWSI 174
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
SW+W+K++++R A VK+ I NG++ +W
Sbjct: 175 SGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSFW 212
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = -2
Query: 310 RKLRLLSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKD 131
RK +SW +C P+ EGG+GLR + E + +KL+ W + L V+W++ ++K
Sbjct: 75 RKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLI-WRLLSSSSLWVQWLRQYVIRKG 133
Query: 130 SLWSVKERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
S WS+++ SW+WRK+++YR A +Y I NG + +W
Sbjct: 134 SFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFW 176
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/98 (32%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +IC+P+ EGG+G++ + E + +KL+ + S + L V W+ ++K + WS
Sbjct: 1157 IAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSA 1216
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
ER SW+W+K+++YR A + K + NG+S +W
Sbjct: 1217 NERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFW 1254
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -2
Query: 295 LSWETICKPQLEGGIGLRKVKEFSMAGIIKLV*WIASNKQCLRVKWVQIRFLKKDSLWSV 116
++W +CK + EGG+GL+ +KE + ++KL+ I S + L VKWV ++K++ WSV
Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSV 1066
Query: 115 KERVDC-SWVWRKVMQYRLRAMHVVKYLIGNGNSIKWW 5
KE SW+WRK+++ R +A + + +G +W
Sbjct: 1067 KENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFW 1104