BLASTX nr result
ID: Sinomenium22_contig00022304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00022304
(401 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera] 80 2e-13
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro... 76 5e-12
ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloro... 69 9e-10
ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloro... 67 2e-09
ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citr... 67 2e-09
ref|XP_007206158.1| hypothetical protein PRUPE_ppa013536mg [Prun... 66 4e-09
ref|XP_002322970.1| PLASTID-SPECIFIC RIBOSOMAL protein 4 [Populu... 66 6e-09
ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Caps... 64 2e-08
gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis] 64 2e-08
ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidop... 64 2e-08
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid... 64 2e-08
ref|XP_007026761.1| Plastid-specific ribosomal protein 4 [Theobr... 64 3e-08
ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloro... 59 5e-07
ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloro... 59 9e-07
ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutr... 58 2e-06
sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal protein S31, ... 58 2e-06
gb|AFK38352.1| unknown [Lotus japonicus] 55 8e-06
>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
Length = 117
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/73 (54%), Positives = 49/73 (67%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQTLPTVYCGRGDR 284
MA+LI GA +AP S+NLSS+ SFS++ETL +P+VYCGRGD+
Sbjct: 1 MAALILGAPAIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPPIPSVYCGRGDK 60
Query: 285 KTAKGKRFNHSFG 323
KTAKGKRFNHSFG
Sbjct: 61 KTAKGKRFNHSFG 73
>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
product [Vitis vinifera]
Length = 118
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQT-LPTVYCGRGD 281
MA+LI GA +AP S+NLSS+ SFS++ETL +P+VYCGRGD
Sbjct: 1 MAALILGAPAIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPPPIPSVYCGRGD 60
Query: 282 RKTAKGKRFNHSFG 323
+KTAKGKRFNHSFG
Sbjct: 61 KKTAKGKRFNHSFG 74
>ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 117
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQ-TLPTVYCGRGD 281
MASL+ GAL + S+ L+S++SFS++ETL ++P+VYCGRGD
Sbjct: 1 MASLVLGALPIPSQSLALNSRISFSQSETLAISLPSPTASLSISTATTPSVPSVYCGRGD 60
Query: 282 RKTAKGKRFNHSFG 323
+KT +GKRFNHSFG
Sbjct: 61 KKTERGKRFNHSFG 74
>ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Citrus
sinensis]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/90 (42%), Positives = 50/90 (55%)
Frame = +3
Query: 54 WQRLCVVASLSNISASFMASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXX 233
++ L S S S MASL+ GAL + P S++S S+++ LG
Sbjct: 15 FENLAEAGSQRGNSKSAMASLLVGALPLTP-----QSRISSSQSQILGTPLSLSCSLSLP 69
Query: 234 XXXXQTLPTVYCGRGDRKTAKGKRFNHSFG 323
++P VYCGRGD+KTAKGKRFNHSFG
Sbjct: 70 STPSPSIPYVYCGRGDKKTAKGKRFNHSFG 99
>ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citrus clementina]
gi|557531383|gb|ESR42566.1| hypothetical protein
CICLE_v10013049mg [Citrus clementina]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/90 (42%), Positives = 50/90 (55%)
Frame = +3
Query: 54 WQRLCVVASLSNISASFMASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXX 233
++ L S S S MASL+ GAL + P S++S S+++ LG
Sbjct: 15 FENLAEAGSQRGNSKSAMASLLVGALPLTP-----QSRISSSQSQILGTPLSLSCSLSVP 69
Query: 234 XXXXQTLPTVYCGRGDRKTAKGKRFNHSFG 323
++P VYCGRGD+KTAKGKRFNHSFG
Sbjct: 70 STPSPSIPYVYCGRGDKKTAKGKRFNHSFG 99
>ref|XP_007206158.1| hypothetical protein PRUPE_ppa013536mg [Prunus persica]
gi|462401800|gb|EMJ07357.1| hypothetical protein
PRUPE_ppa013536mg [Prunus persica]
Length = 117
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQTL-PTVYCGRGD 281
MASLI GAL + ++ SS++SFS++ET+ L P+VYCGRGD
Sbjct: 1 MASLILGALPIPTQTLTFSSRISFSQSETVSISLPSSTASLSVSTATTPLVPSVYCGRGD 60
Query: 282 RKTAKGKRFNHSFG 323
+KT +GKRFNHS+G
Sbjct: 61 KKTERGKRFNHSYG 74
>ref|XP_002322970.1| PLASTID-SPECIFIC RIBOSOMAL protein 4 [Populus trichocarpa]
gi|222867600|gb|EEF04731.1| PLASTID-SPECIFIC RIBOSOMAL
protein 4 [Populus trichocarpa]
Length = 113
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQTLPTVYCGRGDR 284
MASL+ GA+ M P ++N S+LS+S+++ ++P VYCGRGDR
Sbjct: 1 MASLMVGAIPMTPQALNFGSRLSYSQSQ---ISLCHSTSSLPLSTARTSVPFVYCGRGDR 57
Query: 285 KTAKGKRFNHSFG 323
KT +GKRFNHSFG
Sbjct: 58 KTERGKRFNHSFG 70
>ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Capsella rubella]
gi|482565239|gb|EOA29429.1| hypothetical protein
CARUB_v10025723mg [Capsella rubella]
Length = 118
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINL---SSQLSFSRTETLGFXXXXXXXXXXXXXXXQT-LPTVYCG 272
MASLI GA PP + + SS+LS S++ET G + +P VYCG
Sbjct: 1 MASLILGA----PPRVTVAISSSRLSSSQSETAGVSLSCFTQQFSLSASSSSSIPLVYCG 56
Query: 273 RGDRKTAKGKRFNHSFG 323
RGDRKTAKGKRFNHSFG
Sbjct: 57 RGDRKTAKGKRFNHSFG 73
>gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis]
Length = 122
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQT----LPTVYCG 272
MASL+ G+L + S+ L+S++SFS+++TL T P+VYCG
Sbjct: 1 MASLLLGSLPIPSQSLPLASRISFSQSQTLATSLPSFALSSSFSSISATSPPSFPSVYCG 60
Query: 273 RGDRKTAKGKRFNHSFG 323
RGD+KT +GKRFNHS+G
Sbjct: 61 RGDKKTERGKRFNHSYG 77
>ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidopsis thaliana]
gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
ribosomal protein S31, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
ribosomal protein 4 precursor [Arabidopsis thaliana]
gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
[Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
At2g38140/F16M14.7 [Arabidopsis thaliana]
gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
[Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
ribosomal protein S31 [Arabidopsis thaliana]
gi|330254400|gb|AEC09494.1| plastid-specific ribosomal
protein 4 [Arabidopsis thaliana]
Length = 118
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINL---SSQLSFSRTETLGFXXXXXXXXXXXXXXXQT-LPTVYCG 272
MASLI GA PP + + SS+LS S +ET G + +P VYCG
Sbjct: 1 MASLILGA----PPRVTVALPSSRLSSSHSETAGVSLSCFTHQFSLSTSSSSSIPLVYCG 56
Query: 273 RGDRKTAKGKRFNHSFG 323
RGDRKTAKGKRFNHSFG
Sbjct: 57 RGDRKTAKGKRFNHSFG 73
>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINL---SSQLSFSRTETLGFXXXXXXXXXXXXXXXQT-LPTVYCG 272
MASLI GA PP + + SS+LS S +ET G + +P VYCG
Sbjct: 1 MASLILGA----PPRVTVALSSSRLSSSHSETAGVSLSCSTHQFSLSTSSSSSIPLVYCG 56
Query: 273 RGDRKTAKGKRFNHSFG 323
RGDRKTAKGKRFNHSFG
Sbjct: 57 RGDRKTAKGKRFNHSFG 73
>ref|XP_007026761.1| Plastid-specific ribosomal protein 4 [Theobroma cacao]
gi|508715366|gb|EOY07263.1| Plastid-specific ribosomal
protein 4 [Theobroma cacao]
Length = 121
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSS--QLSFSRTETLGFXXXXXXXXXXXXXXXQ-TLPTVYCGR 275
MASL+ GA + S+NLSS ++S S ++TLG ++P VYCGR
Sbjct: 1 MASLLLGAAPVPAQSVNLSSLSRISSSHSQTLGTSLSVSTSSVSLSTASSPSIPYVYCGR 60
Query: 276 GDRKTAKGKRFNHSFG 323
GD+KT KGKRFNHSFG
Sbjct: 61 GDKKTKKGKRFNHSFG 76
>ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
tuberosum]
Length = 121
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +3
Query: 105 MASLIFGALHMAPPS--INLSSQLSFSRTETLG-----FXXXXXXXXXXXXXXXQTLPTV 263
MASL+ G++ MA +LS LSFSR+ ++ LP +
Sbjct: 1 MASLLVGSVPMATVQSMASLSPNLSFSRSHSVAGSVSIAAASPSASISSLSLTDSNLPLI 60
Query: 264 YCGRGDRKTAKGKRFNHSFG 323
YCGRGD+KTAKGKRFNHSFG
Sbjct: 61 YCGRGDKKTAKGKRFNHSFG 80
>ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
lycopersicum]
Length = 121
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +3
Query: 105 MASLIFGALHMAPPS--INLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQTL-----PTV 263
MASL+ G++ M+ +LS LSFSR+ ++ +L P V
Sbjct: 1 MASLLVGSVPMSTVQSMASLSPNLSFSRSHSVAGSVSITAASPSPSISFSSLTDSNLPLV 60
Query: 264 YCGRGDRKTAKGKRFNHSFG 323
YCGRGD+KTAKGKRFNHSFG
Sbjct: 61 YCGRGDKKTAKGKRFNHSFG 80
>ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutrema salsugineum]
gi|557112185|gb|ESQ52469.1| hypothetical protein
EUTSA_v10017376mg [Eutrema salsugineum]
Length = 149
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLS---SQLSFSRTETLGFXXXXXXXXXXXXXXXQT-LPTVYCG 272
MASL+ GA +++LS S+LS S ++ G + +P VYCG
Sbjct: 28 MASLLLGAPPRVTVALSLSTSSSRLSSSHSKISGVSLSCFTHQLSLSDSSSSSIPLVYCG 87
Query: 273 RGDRKTAKGKRFNHSFG 323
RGDRKTAKGKRFNHSFG
Sbjct: 88 RGDRKTAKGKRFNHSFG 104
>sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal protein S31, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
gi|7578854|gb|AAF64154.1|AF236825_1 plastid-specific
ribosomal protein 4 precursor [Spinacia oleracea]
Length = 101
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 105 MASLIFGALHMAPPSINLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQT---LPTVYCGR 275
MASL+ G MA S++ S FS ++++ T LP +YCGR
Sbjct: 1 MASLLLGTPSMACHSVSFS----FSHSQSVAGVSLSSPPTLSLSSSVSTSPALPLIYCGR 56
Query: 276 GDRKTAKGKRFNHSFG 323
GDRKTAKGKRFNHSFG
Sbjct: 57 GDRKTAKGKRFNHSFG 72
>gb|AFK38352.1| unknown [Lotus japonicus]
Length = 121
Score = 55.5 bits (132), Expect = 8e-06
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 105 MASLIFGALHMAPPSI-NLSSQLSFSRTETLGFXXXXXXXXXXXXXXXQTLPT--VYCGR 275
MA+L+ +L P + + SS LSFS+++T PT VYCGR
Sbjct: 1 MATLLLQSLPPLPIQLQSSSSHLSFSQSQTFSSPLCTSFTSLSTSATSSISPTPSVYCGR 60
Query: 276 GDRKTAKGKRFNHSFG 323
GDRKT +GKRFNHSFG
Sbjct: 61 GDRKTERGKRFNHSFG 76