BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00022109
         (1183 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   308   4e-81
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came...   280   1e-72
ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein...   246   1e-62
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi...   244   7e-62
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi...   239   1e-60
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi...   231   5e-58
ref|XP_002320827.2| pentatricopeptide repeat-containing family p...   225   3e-56
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]     224   7e-56
ref|XP_007160491.1| hypothetical protein PHAVU_002G326200g [Phas...   224   7e-56
ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-52
ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-52
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-52
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,...   207   5e-51
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   207   7e-51
ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Caps...   203   1e-49
ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutr...   201   5e-49
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   201   7e-49
ref|NP_191711.1| pentatricopeptide repeat-containing protein [Ar...   200   1e-48
ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containi...   199   1e-48

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  308 bits (788), Expect = 4e-81
 Identities = 173/365 (47%), Positives = 228/365 (62%), Gaps = 4/365 (1%)
 Frame = -1

Query: 1084 KQAKLLRLHTGGARAARIRSFLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANX 905
            KQ+KLLR          + S LRH SA     EP   P +   Q ++ +       + N 
Sbjct: 10   KQSKLLRF-LRPQTPPNLSSLLRHLSA-----EPDHHPPAPPPQNDSSS-------VVNL 56

Query: 904  XXXXLQSSDEDWNQEELHRLV----SSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSS 737
                LQ++D DWN+++LH+L+    S   P + L+Q+ R LG++AKA+KFF W+Q N+  
Sbjct: 57   VVELLQTTDNDWNEDKLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPC 116

Query: 736  IFQVLSSPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIE 557
                L S    A+F+ AS EPNSH              + LSV++A LLIR F RA  ++
Sbjct: 117  QDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVD 176

Query: 556  ESLQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVF 377
            ES  V+N++  S R TH+ N L+DVL +  R+ D   LLDEM Q  + FPPN  TG IVF
Sbjct: 177  ESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVF 236

Query: 376  SALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSL 197
            SAL KR   GRA+   E+  LVSK  EH+VFP +I LT+L+++LCRS  T +AW++LH L
Sbjct: 237  SALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGL 296

Query: 196  MRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRV 17
            M+L G +EA SCNALL  LGR  +F+RMN LLAEMKEM I+PNV+TFGILI+HLCK  RV
Sbjct: 297  MKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRV 356

Query: 16   DEALE 2
            DEALE
Sbjct: 357  DEALE 361



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
 Frame = -1

Query: 625  GVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQDV 452
            GV  +V +   L+    + GRI  +++ FN++       +      L+      + I+  
Sbjct: 446  GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 451  QQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETI 272
             +L DEM +   S  P+ +    + S L +     RA      + ++SK+ E    P+ +
Sbjct: 506  MELFDEMLEAGCS--PDAIVYYTLISGLSQAGKLDRA------SFVLSKMKEAGFSPDIV 557

Query: 271  LLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEM 92
                L+   CR +   +A+E+L  +       +  + N L++   +  DF   + L+ +M
Sbjct: 558  SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 91   KEMGIKPNVITFGILIHHLCKMHRVDEALE 2
             + G+ P V+T+G LIH  C    +DEA++
Sbjct: 618  VKEGLVPTVVTYGALIHAYCLNGNLDEAMK 647


>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
          Length = 771

 Score =  280 bits (715), Expect = 1e-72
 Identities = 154/367 (41%), Positives = 226/367 (61%), Gaps = 6/367 (1%)
 Frame = -1

Query: 1084 KQAKLLRLHTGGARAARIRSFLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANX 905
            KQ+ LLRL    +        LRH S+  +   PPE P  +           PN ++   
Sbjct: 10   KQSNLLRLVKPNSSTTLPSLLLRHLSSSATDPPPPEPPPPL-----------PNSILTTQ 58

Query: 904  XXXXLQSSDEDWNQ--EELHRLVSSIAPTNR---LVQVIRRLGNSAKAVKFFEWIQKNNS 740
                LQ+ + DWN   +EL +L+ S   +     L ++ R LG + KA+ FFE+ +  + 
Sbjct: 59   ILNLLQTHEIDWNNNNDELRQLLFSSTDSPHSFSLYKITRSLGTATKALNFFEFFRTQSP 118

Query: 739  SIFQVLS-SPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGR 563
            S     S S ++ AIF++AS +PN             +  + L+  SA LLIR F RAG 
Sbjct: 119  SPPDPSSLSSSFQAIFELASQQPNPPTKLSELLTISKDHNIPLNFSSATLLIRCFARAGL 178

Query: 562  IEESLQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSI 383
            +E+S+ +F ++D   ++TH+ N ++D+LL+A R+ D  Q+ DEM + DS  PPN++T +I
Sbjct: 179  VEKSVLIFKELDPDLKNTHISNLIVDILLRAGRVDDAFQVFDEMLKPDSESPPNEITVNI 238

Query: 382  VFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLH 203
              + LL R   GR++S  E+  LVSK GE  VFP  + LT+L+TKLCR+  + +AW+++H
Sbjct: 239  AMAGLLWRDRTGRSVSDEEIIGLVSKFGECGVFPSVVRLTQLITKLCRTGKSDRAWDVIH 298

Query: 202  SLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMH 23
            ++M+L G V+APSCNALLAGLGR+ +FQ+MN LLAEMKE GI+P++ITFGIL++HLCK  
Sbjct: 299  NVMKLGGDVQAPSCNALLAGLGRQQNFQKMNKLLAEMKENGIQPDIITFGILVNHLCKFR 358

Query: 22   RVDEALE 2
            RVDEALE
Sbjct: 359  RVDEALE 365



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
 Frame = -1

Query: 625 GVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHL--CNTLLDVLLKADRIQDV 452
           GV  SV     LI +  R G+ + +  V ++V     D     CN LL  L +    Q +
Sbjct: 269 GVFPSVVRLTQLITKLCRTGKSDRAWDVIHNVMKLGGDVQAPSCNALLAGLGRQQNFQKM 328

Query: 451 QQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHD----VF 284
            +LL EM  +++   P+ +T  I+ + L K      A+   EV E +S   E D    V 
Sbjct: 329 NKLLAEM--KENGIQPDIITFGILVNHLCKFRRVDEAL---EVFEKMSGERESDDGFSVK 383

Query: 283 PETILLTKLVTKLCRSSNTSQAWELLHSLMRLNG--PVEAPSCNALLAGLGREWDFQRMN 110
           P+TIL   L+  LC+     Q   LL  +    G  P  A + N L+ G  +  +  R +
Sbjct: 384 PDTILYNTLIDGLCKVGRQEQGLGLLEKMKLEQGCAPTTA-TYNCLIDGFCKSGEIGRAH 442

Query: 109 LLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            L  +M + G+ PNVIT   L+  +CK  R++ A+E
Sbjct: 443 ELFDQMNKEGVPPNVITLNTLVDGMCKHGRINSAME 478



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
            +GV  +V +   L+    + GRI  +++ FN++       +      L++    A+ I  
Sbjct: 451  EGVPPNVITLNTLVDGMCKHGRINSAMEFFNEMQGKGLKGNAVTYTALINAFCNANNIDK 510

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEH-DVFPE 278
              QL +EM + + S  P+ +    + S L +    G+      V  ++ K G   D+   
Sbjct: 511  AMQLFNEMSKAECS--PDAIVYYTLISGLTQA---GKLDDASFVATVMKKAGFCLDIMSY 565

Query: 277  TILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLA 98
             IL    +   C  +   +A+E+L  + +     +  + N+L++   +  DF   + ++ 
Sbjct: 566  NIL----IGGFCSKNKLDKAYEMLKEMEQAGVKPDGITYNSLISYFSKNGDFMTAHRVMR 621

Query: 97   EMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            EM   G+ P V+T G LIH  C + ++DEA++
Sbjct: 622  EMISDGLVPTVVTCGALIHAYCLVGKLDEAMK 653


>ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508703965|gb|EOX95861.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 764

 Score =  246 bits (628), Expect = 1e-62
 Identities = 133/299 (44%), Positives = 191/299 (63%), Gaps = 3/299 (1%)
 Frame = -1

Query: 889 QSSDEDWNQEE-LHRLVSSIAPTNR--LVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLS 719
           ++  E+W+  + L  L+ S  P +   L+Q+ RRL +S++A+ FF+ +Q+N+ S      
Sbjct: 61  ETPHEEWSSSQPLQSLLFSSPPLSPRFLLQITRRLPSSSEALNFFKHLQQNSPSQDAQFL 120

Query: 718 SPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVF 539
           S  + A+ + A  EP+S            +  + L+V++A LLIR F R   ++ESL +F
Sbjct: 121 SYPFQAVLEQAGREPDSATRLSQLYQDSKQWEIPLTVNAAVLLIRYFGRLEMVDESLLIF 180

Query: 538 NDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKR 359
           N++D + ++TH+ N L+DV L+  R+     +LDEM Q  S  PPND+TG IVF  L+KR
Sbjct: 181 NELDPTLKNTHVRNVLIDVSLRDGRVDYALNVLDEMLQPLSEVPPNDVTGDIVFYGLVKR 240

Query: 358 SLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGP 179
              GR +S  E+ +LV K GEH VFP TI LT+L+T+LCRS   +QAW +L  L+RL  P
Sbjct: 241 ERKGRKLSEEEIIKLVLKFGEHSVFPRTIWLTQLITRLCRSGKINQAWNVLQELLRLRAP 300

Query: 178 VEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
           +EA   NA+L GLGR  D +RMN+LL EMKE  I+PN +TFGILI+ LCK  RVDEA+E
Sbjct: 301 LEAAPFNAVLTGLGRSGDVERMNMLLVEMKESDIQPNGVTFGILINQLCKSRRVDEAME 359



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
            +GVS +V +   L+    R GR   +L+ FND+       +     TL+      + I  
Sbjct: 444  EGVSPNVITLNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTLISAFCNVNNIDK 503

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPET 275
               L D++ +   S        +IV+ +L+        M   + + ++SKL E    P+ 
Sbjct: 504  AVDLFDQLLRSGCS------ADAIVYYSLISGLCQAGRMD--DASNVLSKLKEAGFCPDV 555

Query: 274  ILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAE 95
                 L++  C+ +   +A+E+L  +      V+  + N L+A   +  +F   + ++ +
Sbjct: 556  ACYNVLISGFCKKNKIDKAYEILKEMEEAGMKVDNVTYNTLIAYFSKIGEFGVAHRVMKK 615

Query: 94   MKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            M   G+ P V T+G LIH  C    + EA++
Sbjct: 616  MIGEGLVPTVATYGALIHAYCLNGNIKEAMK 646



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
 Frame = -1

Query: 592 LIRRFERAGRIEESLQVFNDVDSSTRDTHLC--NTLLDVLLKADRIQDVQQLLDEMHQRD 419
           LI R  R+G+I ++  V  ++            N +L  L ++  ++ +  LL EM  ++
Sbjct: 274 LITRLCRSGKINQAWNVLQELLRLRAPLEAAPFNAVLTGLGRSGDVERMNMLLVEM--KE 331

Query: 418 SSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGE----HDVFPETILLT--KL 257
           S   PN +T  I+ + L K      AM      E+++++GE     DV  E  ++T   L
Sbjct: 332 SDIQPNGVTFGILINQLCKSRRVDEAM------EVLNRMGEGTGSDDVSVEADIITYNTL 385

Query: 256 VTKLCRSSNTSQAWELLHSLMRLNGPV-EAPSCNALLAGLGREWDFQRMNLLLAEMKEMG 80
           +  LC+     +   L+  +    G      + N L+ G  +  + +R   L   MKE G
Sbjct: 386 IDGLCKVGRQEEGLRLMERMRCTKGLAPNTVTYNCLIDGFCKVGEIERGKELYDRMKEEG 445

Query: 79  IKPNVITFGILIHHLCKMHRVDEALE 2
           + PNVIT   L+  +C+  R   ALE
Sbjct: 446 VSPNVITLNTLVDGMCRHGRTSSALE 471


>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g28460-like
            [Citrus sinensis]
          Length = 757

 Score =  244 bits (622), Expect = 7e-62
 Identities = 139/344 (40%), Positives = 205/344 (59%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1021 LRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANXXXXXLQSSDEDWNQEELHR-- 848
            LRHF  + +   P  + +S+              +I       LQ+ D +W      +  
Sbjct: 21   LRHFCTEHNSPLPQVSESSI--------------IITQALDVLLQTPDNEWTSSPQIKNL 66

Query: 847  LVSSIAPTNRLV-QVIRRLGNSAKAVKFFEWIQKNNSSIFQVLS-SPAYHAIFDVASHEP 674
            L SS + + +L  Q+ RR  +S++A+ FF ++Q N  +     S S AY A+F++A  E 
Sbjct: 67   LFSSTSLSPQLFFQITRRFPSSSRALSFFNFLQSNLPTEANTSSLSYAYQAVFELAIRER 126

Query: 673  NSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCNT 494
             S            +Q + LS++SA LLIR F +    + SL V+N++D++ R+TH+ N 
Sbjct: 127  MSPESLFDLYKACKDQNIPLSINSATLLIRFFGKVSMYDYSLLVYNELDNNLRNTHVRNV 186

Query: 493  LLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTEL 314
            L+DVLL+ D  +D   +LDEM  R+S FP N+LTG IVF AL++R     +++  E+  L
Sbjct: 187  LIDVLLRCDHDRDAFNVLDEMLDRESQFPVNELTGDIVFYALMRREHVKNSVTDEELVGL 246

Query: 313  VSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGR 134
            VSK  EH VFP  + LT+L+T+ CR   T +AW++LH LM+ + P+EA SCNALL  LGR
Sbjct: 247  VSKFAEHGVFPNAVWLTQLITRFCRKGKTDEAWDVLHVLMKFDAPLEAASCNALLNALGR 306

Query: 133  EWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            E DF+RMN L  EMKE  I+P+V+TFG +I+ LCK++R DEALE
Sbjct: 307  EGDFKRMNQLFTEMKENDIEPSVVTFGTIINRLCKLYRADEALE 350



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCNT-----LLDVLLKADR 464
            +GV+ +V +   L+    R GRI  +++ F +V   TR     N      L+      + 
Sbjct: 437  EGVTPNVVTLNTLVDGMCRHGRINSAVEFFQEV---TRKGLCANAVTYTILITAFCNVNN 493

Query: 463  IQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVF 284
             Q+  +  D+M +   S        S+V+  L+        M+   +  +VSKL E    
Sbjct: 494  FQEAIKWFDDMSRAGCS------ADSVVYFTLISGLCQAGRMNDASL--VVSKLKEAGFR 545

Query: 283  PETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLL 104
            P+ +    L++  C+     +A+E+L  +  +     + + N L++ L +  +F     +
Sbjct: 546  PDIVCYNHLISGFCKKKMLDKAYEVLQEMEDIGMTPNSVTYNTLISFLSKSGNFSAARRV 605

Query: 103  LAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            L +M + G+ P V+T+G LIH  C    VDEA++
Sbjct: 606  LKKMVKEGLVPTVVTYGALIHAFCVNGHVDEAMK 639


>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score =  239 bits (611), Expect = 1e-60
 Identities = 143/351 (40%), Positives = 211/351 (60%), Gaps = 9/351 (2%)
 Frame = -1

Query: 1027 SFLRHFSADIS----PIEPPEAPASVAAQTEA-KTKEKPNWVIANXXXXXLQSSDEDWNQ 863
            S LRHFS +I     P+ PP    +V       KT +  +W+                N 
Sbjct: 23   SGLRHFSGEIDDTQKPLPPPPTSFAVPEIVSLLKTNDHNDWIS---------------NS 67

Query: 862  EELHRLVSSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAY--HAIFDV 689
            + +  L +  +PT+ L+++ R+LG++ KA+ FFE+ + ++SS     SS ++   AI + 
Sbjct: 68   QLVEFLHTPPSPTS-LLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSFTFQAILEQ 126

Query: 688  ASHEPNSHXXXXXXXXXXXEQG--VSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTR 515
            A HE  S             +   + LS+++A LL+R F RA  +EES+ V+N++DS +R
Sbjct: 127  AMHEEKSDVPGKLFQLFSFAKDRKIPLSINAATLLMRCFGRAKMLEESISVYNELDSDSR 186

Query: 514  DTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMS 335
            +T++ N LLD L +   I D  ++LDEM +R+S FPPN+ T  IV  A+ KR+  GR MS
Sbjct: 187  NTNVVNLLLDCLFRGVNIDDGFKVLDEMLKRESDFPPNNSTVDIVLDAMWKRNWVGRRMS 246

Query: 334  GGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNA 155
              E+  L+ +  EH VF + +  TKL+TK CRS    +AW+LLH +M+L G V+A S NA
Sbjct: 247  VEEICGLLVRFFEHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNA 306

Query: 154  LLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            LL+GLGRE DFQ+MNLL+  MKE  + P+V+TFGI I+HLCK +RVDEAL+
Sbjct: 307  LLSGLGREHDFQKMNLLMNVMKEKEVNPDVVTFGIFINHLCKCYRVDEALQ 357


>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum lycopersicum]
          Length = 761

 Score =  231 bits (589), Expect = 5e-58
 Identities = 141/351 (40%), Positives = 210/351 (59%), Gaps = 9/351 (2%)
 Frame = -1

Query: 1027 SFLRHFSADISPIEPP--EAPASVAAQ---TEAKTKEKPNWVIANXXXXXLQSSDEDWNQ 863
            S LR FS +I   + P  + P S A     +  KT +  +W+                N 
Sbjct: 23   SGLRCFSGEIDDTQKPLPQPPISFAVPEIVSLLKTTDHNDWIS---------------NS 67

Query: 862  EELHRLVSSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAY--HAIFDV 689
            E +  L +  +PT+ L+++ R+LG++ KA++FFE+ + ++SS     SS ++   AI + 
Sbjct: 68   ELVEYLHTPPSPTS-LLKITRQLGSTEKALQFFEFFKTHSSSSSSNPSSLSFTFQAILEQ 126

Query: 688  ASHEPNSHXXXXXXXXXXXEQG--VSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTR 515
            A  E  S             +   + LS+++  LL+R F RA  +EES+ V++++DS +R
Sbjct: 127  AMREEKSDVPRKLFQLFSFAKDRKIPLSINAGTLLMRCFGRAKMLEESISVYHELDSDSR 186

Query: 514  DTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMS 335
            +T++ N LLD L +   I D  ++LDEM +RDS FPPN+ T  IV SA+ K +  GR MS
Sbjct: 187  NTNVVNLLLDCLFRGRNIDDGFKVLDEMLKRDSDFPPNNSTVDIVLSAMWKSNWVGRRMS 246

Query: 334  GGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNA 155
              E+  L+ +  EH VF + +  TKL+TK CRS    +AW+LLH +M+L G V+A S NA
Sbjct: 247  VEEIYGLLVRFFEHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNA 306

Query: 154  LLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            LL GLGRE DFQ+MNLL+ EMKE  + P+V+TFGI I++LCK +RVDEAL+
Sbjct: 307  LLCGLGREHDFQKMNLLMNEMKEKEVNPDVVTFGIFINYLCKCYRVDEALQ 357


>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550323783|gb|EEE99142.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 720

 Score =  225 bits (574), Expect = 3e-56
 Identities = 122/305 (40%), Positives = 193/305 (63%), Gaps = 9/305 (2%)
 Frame = -1

Query: 889 QSSDEDWNQEELHRLVSSIAPTNR-----LVQVIRRLGNSAKAVKFFEWIQKNNSSI--F 731
           Q    +WN  +L++L+ + +P +        Q+ RRL +S++A+KF  ++Q N+ S    
Sbjct: 14  QIPGNEWNTTQLNQLLFTDSPPSSSSPRLFYQITRRLPSSSQALKFLNYLQNNSPSSPDT 73

Query: 730 QVLSSPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEES 551
           Q L S  + AIF++A  EP+S+           E  + L+V++A+ L+R   R+  +EES
Sbjct: 74  QSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEES 133

Query: 550 LQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQR--DSSFPPNDLTGSIVF 377
           L +FND+D S ++T+L N  L +LL++ R++D  +++DEM +   DS+  PND TG I+F
Sbjct: 134 LILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILF 193

Query: 376 SALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSL 197
           S LLKR      +S  E+  LV K GEH V   +  + +L+T+LCR+  T++ W+L   +
Sbjct: 194 SFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEM 253

Query: 196 MRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRV 17
           ++L   +E+ +CN+LL GL RE +F RMN L+ +M EM I+PNV+TFGILI+H+CK  RV
Sbjct: 254 IKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRV 313

Query: 16  DEALE 2
           D+ALE
Sbjct: 314 DDALE 318



 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
 Frame = -1

Query: 625 GVSLSVDSAAL----LIRRFERAGRIEESLQVFNDVDSS---TRDTHLCNTLLDVLLKAD 467
           G+S+SV+   +    LI    + GR +E L +   + S      DT   N L+D   KA 
Sbjct: 331 GISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAG 390

Query: 466 RIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDV 287
            I+  ++L DEM++   +  PN +T + +   + +    GR  S         + G    
Sbjct: 391 EIEKGKELFDEMNKEGVA--PNVVTVNTLVGGMCRT---GRVSSAVNFFVEAQRRGMKG- 444

Query: 286 FPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNL 107
             + +  T L+   C  +N  +A EL + +++     +A     L++G  +       + 
Sbjct: 445 --DAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASF 502

Query: 106 LLAEMKEMGIKPNVITFGILIHHLC---KMHRVDEALE 2
           +LAE+K++GI+P+ + +  LI   C   K HRV E L+
Sbjct: 503 VLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLK 540


>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
          Length = 769

 Score =  224 bits (570), Expect = 7e-56
 Identities = 133/347 (38%), Positives = 195/347 (56%), Gaps = 5/347 (1%)
 Frame = -1

Query: 1027 SFLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANXXXXXLQSSDEDWNQEELHR 848
            S LRH S +  P +  E   S A Q                    LQ  + +WN E+L  
Sbjct: 29   SILRHLSVESYPPKDDETFISHALQL-------------------LQPPETEWNAEQLQT 69

Query: 847  LV----SSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNS-SIFQVLSSPAYHAIFDVAS 683
            L+     S +PT RL+ + RRL +S+KA+ FF+ +++N+       L +  + A+ ++AS
Sbjct: 70   LLFSDSESPSPT-RLLHIARRLDSSSKALNFFDHVRENSHLPKDSSLLASTFQAVLELAS 128

Query: 682  HEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHL 503
             EP+             E+ V L++++A LL   F RAG  EE + V   +D   ++TH 
Sbjct: 129  REPSWEKRLFELYTTSRERNVPLTINAATLLFVCFGRAGMREELMTVLKGLDDDCKNTHA 188

Query: 502  CNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEV 323
             N ++DVLL+   + D   +LDEM + D  FPPN++TG+ VF  LL R    R     E+
Sbjct: 189  LNRVIDVLLRLGCVDDALHVLDEMLEPDGKFPPNEVTGNAVFPLLLNRDRSFRRFEDEEI 248

Query: 322  TELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAG 143
              LVS+ GEH VFP+ +LL +L+T  CR      AW++L ++++ NG V   +CNALLAG
Sbjct: 249  IGLVSRFGEHGVFPDGLLLRQLITNFCRDKKDGCAWDVLCNVIKSNGSVATDACNALLAG 308

Query: 142  LGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            L R  DF++MN L+ +MKE  IKPNV+T+GILI+ LCK  R+D ALE
Sbjct: 309  LARSKDFKKMNELMEKMKEKDIKPNVVTYGILINCLCKSRRIDGALE 355



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
 Frame = -1

Query: 592 LIRRFERAGRIEESLQVFNDV--DSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRD 419
           LI  F + G IE  L++F+ +  D    D    NTL+D + K  R+    +L D M +  
Sbjct: 417 LIDGFNKVGEIERGLKIFDQMKRDQVPPDVVTLNTLVDGMCKLGRVGSAVKLFDVMQR-- 474

Query: 418 SSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCR 239
           +    N  T +++ +A    +   +AM      EL  ++       + IL   L++ L R
Sbjct: 475 TGIQGNAFTYTMLIAAFCSVNNINKAM------ELFDQMVSSRHSADAILYYSLISGLSR 528

Query: 238 SSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVIT 59
           +     A  ++  L      ++  + N L++G  ++    +   +L +M+E GIKPN IT
Sbjct: 529 AGRMDDASMVVSKLKEAGFCLDIVAYNVLISGFCKKNKLDKAYEMLKDMEETGIKPNTIT 588

Query: 58  FGILIHHLCKMHRVDEA 8
           +  LI H CK+   + A
Sbjct: 589 YNTLISHFCKIGSFETA 605



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
 Frame = -1

Query: 574 RAGRIEESLQVFNDVDSST---RDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPP 404
           + GR EE L +   + S      +T   N L+D   K   I+   ++ D+M +RD   PP
Sbjct: 387 KVGRQEEGLNLMEQMRSEEFCKPNTVTYNCLIDGFNKVGEIERGLKIFDQM-KRDQ-VPP 444

Query: 403 NDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTS 224
           + +T + +   + K    GR  S  ++ +++ + G   +       T L+   C  +N +
Sbjct: 445 DVVTLNTLVDGMCKL---GRVGSAVKLFDVMQRTG---IQGNAFTYTMLIAAFCSVNNIN 498

Query: 223 QAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILI 44
           +A EL   ++      +A    +L++GL R       +++++++KE G   +++ + +LI
Sbjct: 499 KAMELFDQMVSSRHSADAILYYSLISGLSRAGRMDDASMVVSKLKEAGFCLDIVAYNVLI 558

Query: 43  HHLCKMHRVDEALE 2
              CK +++D+A E
Sbjct: 559 SGFCKKNKLDKAYE 572


>ref|XP_007160491.1| hypothetical protein PHAVU_002G326200g [Phaseolus vulgaris]
           gi|561033906|gb|ESW32485.1| hypothetical protein
           PHAVU_002G326200g [Phaseolus vulgaris]
          Length = 760

 Score =  224 bits (570), Expect = 7e-56
 Identities = 124/294 (42%), Positives = 183/294 (62%), Gaps = 4/294 (1%)
 Frame = -1

Query: 871 WNQEELHRLVSSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAYHAIFD 692
           W+ ++L   +     ++ L+ +  RL +  KA+ F  ++  + +   Q LS   +    +
Sbjct: 57  WDYDKLRPFL--FEASHHLLHITIRLNSIPKALDFINFLG-DRTEHHQALSR-VFEGALE 112

Query: 691 VASHEPNSHXXXXXXXXXXXEQG--VSLSVDSAALLIRRFERAGRIEESLQVFNDVDSST 518
           +A+  PNS              G  ++L+  S  LL++   +A  +E+SL +F ++DSS+
Sbjct: 113 LATQHPNSQKELLMLHSYRKSIGGRIALTSRSGFLLLKCLGKAQMVEDSLILFKELDSSS 172

Query: 517 RDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAM 338
           + + +CN LL  L ++  I     +LDEM +RDS FPPN+ TG +VF  L ++   GR+ 
Sbjct: 173 KSSEICNELLKGLFRSGGIDGALHVLDEMLERDSDFPPNNFTGEVVFRVLGEQERRGRSF 232

Query: 337 SGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNG--PVEAPS 164
           +  E+  LV+KL EH VFP+T  LT+++TKLCR      AWE+LH +MRL G   VEA S
Sbjct: 233 ADEEIMGLVTKLCEHGVFPDTFKLTQMITKLCRHRKNGVAWEVLHVVMRLGGAVAVEAAS 292

Query: 163 CNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
           CNALLAGLGRE D QRMN L+AEM+EMGIKP+V+TFGIL++HLCK  R+DEAL+
Sbjct: 293 CNALLAGLGRERDIQRMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALQ 346



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
 Frame = -1

Query: 625 GVSLSVDSAALLIRRFERAGRIEESLQVFNDV----DSSTR-----DTHLCNTLLDVLLK 473
           G+  SV +  +L+    +A RI+E+LQVF+ +    + + R     D  L NTL+D L K
Sbjct: 320 GIKPSVVTFGILVNHLCKARRIDEALQVFDKLRGKGEGNNRVGVEPDVVLFNTLIDGLCK 379

Query: 472 ADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEH 293
             R +    LL+EM  +  S  PN +T + +     K      A + G+  EL S++ E 
Sbjct: 380 VGREEHGLSLLEEMKTKKQS-RPNTITYNCLIDGFCK------AGNIGKARELYSQMIEE 432

Query: 292 DVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRM 113
            V P  + L  +V  LC+      A E  + +        A +  AL++      +  + 
Sbjct: 433 GVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKA 492

Query: 112 NLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEA 8
                +M   G  P+ I +  LI  L    R+D+A
Sbjct: 493 MQYFDDMLSSGCSPDAIVYYSLISGLSTAGRMDDA 527



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 44/211 (20%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
            +GV  SV +   ++    + G++  +++ FN++       +      L+      + I  
Sbjct: 432  EGVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDK 491

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPET 275
              Q  D+M    S   P+ +   + +S +   S  GR     + + +VS+L +     + 
Sbjct: 492  AMQYFDDM--LSSGCSPDAI---VYYSLISGLSTAGRM---DDASVVVSRLKQAGFGLDL 543

Query: 274  ILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAE 95
                 L++  C+     + +E+L+ +       +  + N L++ LG+  DF+  + ++  
Sbjct: 544  TCYNVLISGFCKKKKLERVYEMLNEMEVTGVKPDIVTYNTLVSYLGKIGDFETASNVMKR 603

Query: 94   MKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            M + G++P+V+T+G +IH  C    VDEA++
Sbjct: 604  MIKEGLEPSVVTYGAVIHAYCLKKNVDEAMK 634


>ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 643

 Score =  213 bits (542), Expect = 1e-52
 Identities = 103/186 (55%), Positives = 136/186 (73%)
 Frame = -1

Query: 562 IEESLQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSI 383
           ++ SL  FN++D S++ T +CN LL  L K+ R  D   +LD+M + +S FPP+D TG +
Sbjct: 40  LDVSLLRFNELDPSSKSTRVCNGLLMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGEV 99

Query: 382 VFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLH 203
           VF  L+KR  PG+ ++  E+  LV+KLGEH VFP+T  LT+L++KLC       AWELLH
Sbjct: 100 VFGELVKRERPGKGLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELLH 159

Query: 202 SLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMH 23
            +M+L GPVEA SCNALL GLGRE D Q+MN LLAEM+E+ I+P+VITFGILI+HLCK  
Sbjct: 160 GVMKLGGPVEAASCNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKAR 219

Query: 22  RVDEAL 5
           R+DEAL
Sbjct: 220 RIDEAL 225



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
 Frame = -1

Query: 628 QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
           +GV  +V +   L+    + GR+  +++  N++       +      L+      + I  
Sbjct: 311 EGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQ 370

Query: 454 VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPET 275
             Q  DEM    S   P+ +   + +S +   S+ GR     + + +VS+L       + 
Sbjct: 371 AMQYFDEM--LSSGCSPDAI---VYYSLISGLSIAGRM---DDASVVVSQLKRAGFGLDR 422

Query: 274 ILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAE 95
                L++  C+     + +E+L+ +       +  + N L++ LG+  DF   + ++ +
Sbjct: 423 TCYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEK 482

Query: 94  MKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
           M + G+KP+V+T+G +IH  C    VDEA++
Sbjct: 483 MIKEGLKPSVVTYGAVIHAYCLKKNVDEAMK 513



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
 Frame = -1

Query: 502 CNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEV 323
           CN LL  L +   IQ + +LL EM +      P+ +T  I+ + L K      A+   + 
Sbjct: 173 CNALLTGLGRERDIQKMNKLLAEMEEL--KIRPSVITFGILINHLCKARRIDEALGVFDK 230

Query: 322 TELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLM--RLNGPVEAPSCNALL 149
                +   + V P+ +L   L+  LC+         LL  +   + N P    + N L+
Sbjct: 231 LRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRP-NTVTYNCLI 289

Query: 148 AGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            G  +  +  +   L   M E G++PNV+T   L+  +CK+ RV  A+E
Sbjct: 290 DGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVE 338



 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
 Frame = -1

Query: 613 SVDSAALLIRRFERAGRIEESLQVFNDVDSSTR--------DTHLCNTLLDVLLKADRIQ 458
           SV +  +LI    +A RI+E+L VF+ +             D  L NTL+D L K  R +
Sbjct: 204 SVITFGILINHLCKARRIDEALGVFDKLRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREE 263

Query: 457 DVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPE 278
           D   LL+EM + +    PN +T + +     K      A +  +  EL   + E  V P 
Sbjct: 264 DGLSLLEEM-KTEKKNRPNTVTYNCLIDGFCK------AGNIDKARELFGLMNEEGVQPN 316

Query: 277 TILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLA 98
            + L  LV  +C+      A E L+ +        A +  AL++      +  +      
Sbjct: 317 VVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFD 376

Query: 97  EMKEMGIKPNVITFGILIHHLCKMHRVDEA 8
           EM   G  P+ I +  LI  L    R+D+A
Sbjct: 377 EMLSSGCSPDAIVYYSLISGLSIAGRMDDA 406


>ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 776

 Score =  213 bits (542), Expect = 1e-52
 Identities = 103/186 (55%), Positives = 136/186 (73%)
 Frame = -1

Query: 562 IEESLQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSI 383
           ++ SL  FN++D S++ T +CN LL  L K+ R  D   +LD+M + +S FPP+D TG +
Sbjct: 173 LDVSLLRFNELDPSSKSTRVCNGLLMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGEV 232

Query: 382 VFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLH 203
           VF  L+KR  PG+ ++  E+  LV+KLGEH VFP+T  LT+L++KLC       AWELLH
Sbjct: 233 VFGELVKRERPGKGLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELLH 292

Query: 202 SLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMH 23
            +M+L GPVEA SCNALL GLGRE D Q+MN LLAEM+E+ I+P+VITFGILI+HLCK  
Sbjct: 293 GVMKLGGPVEAASCNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKAR 352

Query: 22  RVDEAL 5
           R+DEAL
Sbjct: 353 RIDEAL 358



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
            +GV  +V +   L+    + GR+  +++  N++       +      L+      + I  
Sbjct: 444  EGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQ 503

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPET 275
              Q  DEM    S   P+ +   + +S +   S+ GR     + + +VS+L       + 
Sbjct: 504  AMQYFDEM--LSSGCSPDAI---VYYSLISGLSIAGRM---DDASVVVSQLKRAGFGLDR 555

Query: 274  ILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAE 95
                 L++  C+     + +E+L+ +       +  + N L++ LG+  DF   + ++ +
Sbjct: 556  TCYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEK 615

Query: 94   MKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            M + G+KP+V+T+G +IH  C    VDEA++
Sbjct: 616  MIKEGLKPSVVTYGAVIHAYCLKKNVDEAMK 646



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
 Frame = -1

Query: 502 CNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEV 323
           CN LL  L +   IQ + +LL EM +      P+ +T  I+ + L K      A+   + 
Sbjct: 306 CNALLTGLGRERDIQKMNKLLAEMEEL--KIRPSVITFGILINHLCKARRIDEALGVFDK 363

Query: 322 TELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLM--RLNGPVEAPSCNALL 149
                +   + V P+ +L   L+  LC+         LL  +   + N P    + N L+
Sbjct: 364 LRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRP-NTVTYNCLI 422

Query: 148 AGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            G  +  +  +   L   M E G++PNV+T   L+  +CK+ RV  A+E
Sbjct: 423 DGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVE 471



 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
 Frame = -1

Query: 613 SVDSAALLIRRFERAGRIEESLQVFNDVDSSTR--------DTHLCNTLLDVLLKADRIQ 458
           SV +  +LI    +A RI+E+L VF+ +             D  L NTL+D L K  R +
Sbjct: 337 SVITFGILINHLCKARRIDEALGVFDKLRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREE 396

Query: 457 DVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPE 278
           D   LL+EM + +    PN +T + +     K      A +  +  EL   + E  V P 
Sbjct: 397 DGLSLLEEM-KTEKKNRPNTVTYNCLIDGFCK------AGNIDKARELFGLMNEEGVQPN 449

Query: 277 TILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLA 98
            + L  LV  +C+      A E L+ +        A +  AL++      +  +      
Sbjct: 450 VVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFD 509

Query: 97  EMKEMGIKPNVITFGILIHHLCKMHRVDEA 8
           EM   G  P+ I +  LI  L    R+D+A
Sbjct: 510 EMLSSGCSPDAIVYYSLISGLSIAGRMDDA 539


>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 771

 Score =  211 bits (537), Expect = 5e-52
 Identities = 117/302 (38%), Positives = 188/302 (62%), Gaps = 6/302 (1%)
 Frame = -1

Query: 889 QSSDEDWNQEELHRLV---SSIAPTNR-LVQVIRRLGNSAKAVKFFEWIQKNNSSIF--Q 728
           Q +++ WN  +L  L+   S+ +P+ R L+ + RRL +  KA+KFF+++ +N +     +
Sbjct: 58  QPNEQHWNFPQLQTLLFPNSTSSPSPRSLLHITRRLASPNKALKFFDFVSQNLTPQDPPK 117

Query: 727 VLSSPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESL 548
            L S ++ A+ ++   +P S            ++ V +S  +A LL++   RAG  EE+L
Sbjct: 118 ALLSSSFQALVELTLRQPPSETNLYELYKMAKDRNVPISPKAAGLLVQSMGRAGMEEEAL 177

Query: 547 QVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSAL 368
            VFN+++S  + TH+ N ++ + LK  R+    ++LDEM   +++F  ++ T  +V    
Sbjct: 178 IVFNELESGLKTTHIRNVVIGMSLKMGRVDGALKVLDEMLDPEANFQVDEYTVDVVVGLF 237

Query: 367 LKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRL 188
           L+  + GR++S  E+ ELVSK G   VFP +++LTKLV+ LCR+   S AW++LH +M+ 
Sbjct: 238 LRGEIRGRSVSEEEIAELVSKFGGRGVFPNSMVLTKLVSGLCRNRKVSLAWDVLHDVMKK 297

Query: 187 NGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEA 8
            G VEA   NALL+ LGR  +F+RM  L+A+M+EMGIKPNVITFGILI+ LCK  R+  A
Sbjct: 298 GGAVEAAPYNALLSALGRGNEFKRMRELMAKMEEMGIKPNVITFGILINRLCKSRRIGAA 357

Query: 7   LE 2
           +E
Sbjct: 358 ME 359



 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 45/209 (21%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVD-SSTRDTHLCNTLLDVLLKADRIQDV 452
            +G+ ++V +   ++    R GR+  +L+ FN+++    +   +  T+L  +     + ++
Sbjct: 442  EGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGNAVTYTIL--ITSFCNVTNI 499

Query: 451  QQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETI 272
            ++ ++   Q  SS  P D     V+  L+        M   + + +VSK+ E     + +
Sbjct: 500  RKAMELFDQMLSSGCPTDAK---VYHCLISGLSQAGRME--DASFVVSKMKEAGFSMDIV 554

Query: 271  LLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEM 92
                ++      +   +  E++  +       ++ + N LLA LG+  DF+  + +L  M
Sbjct: 555  SYNGMIRGFSSKNKPDKIHEMIEEMEVSRVKPDSVTYNTLLAYLGKSGDFESAHKVLDRM 614

Query: 91   KEMGIKPNVITFGILIHHLCKMHRVDEAL 5
               GI P V+TFG LIH  C    +++A+
Sbjct: 615  LSEGIVPTVVTFGTLIHAHCLDGDIEKAM 643


>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 763

 Score =  209 bits (533), Expect = 1e-51
 Identities = 118/303 (38%), Positives = 187/303 (61%), Gaps = 7/303 (2%)
 Frame = -1

Query: 889 QSSDEDWNQEELHRLV---SSIAPTNR-LVQVIRRLGNSAKAVKFFEWIQKN---NSSIF 731
           Q +++ WN  +LH L+   S+ +P+ R L+ + R L +  KA+KFF+++ +N        
Sbjct: 55  QPNEQHWNFPQLHTLLFPSSTSSPSPRTLLHITRCLASPTKALKFFDFVSQNLTPQDPPK 114

Query: 730 QVLSSPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEES 551
            VLSS ++ A+ ++   +P S            ++ V +S  +  LL++   RAG  EE+
Sbjct: 115 AVLSS-SFEALVELTLRQPPSETNLYELYKMAKDRNVPISPKAVRLLVQSMRRAGMEEEA 173

Query: 550 LQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSA 371
           L VFN++DS+ + T + N  + +LLK  R+ D  ++LDEM   ++ F  +D T  +  S 
Sbjct: 174 LLVFNELDSALKTTFIRNEAIGLLLKMGRVDDALKVLDEMLDPEAKFQVDDFTVGLFLSG 233

Query: 370 LLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMR 191
            ++    GR++S  E+ E VSK GE  VFP +++LTKLV+ LCR+     AW++LH +M+
Sbjct: 234 EIR----GRSVSEEEIVEFVSKFGERVVFPNSVVLTKLVSGLCRNRKVGLAWDVLHDVMK 289

Query: 190 LNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDE 11
             G +EA  CNALL+ LGR  +F+RM  L+A+M+EMGIKP+VITFGILI+ LC+  R+D 
Sbjct: 290 KGGALEAAPCNALLSALGRGNEFERMRELMAKMEEMGIKPDVITFGILINRLCQSRRIDA 349

Query: 10  ALE 2
           A+E
Sbjct: 350 AME 352



 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
 Frame = -1

Query: 628 QGVSLSVDSA--ALLIRRFERAGRIEESLQVFNDVDSSTR---DTHLCNTLLDVLLKADR 464
           +GVS+  D    + LI    + GR EE L++   + S +    DT   N L+D   K   
Sbjct: 362 KGVSVEPDVGIYSTLIDGLCKVGRQEEGLRLMEKMRSQSGCAPDTVTYNILIDGFNKVGD 421

Query: 463 IQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVF 284
           I+  ++L D+M  ++   P N  T + +   L +R     A+      E  +++    + 
Sbjct: 422 IEKGRELFDKM--KEEGIPMNVSTLNTMLDGLSRRGRLNTAL------EFFNEMERKGLK 473

Query: 283 PETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLL 104
            + +  T L+T  C  +N  +A EL   ++    P +A     L++GL +    +  + +
Sbjct: 474 GDFVTYTILITSFCNVTNIHKAMELFDQMLT-GCPTDAKVYRRLISGLSQAGRMEDASFV 532

Query: 103 LAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
           ++++KE G   +++++ ++IH  C  ++ D+  E
Sbjct: 533 VSKLKEAGFSMDIVSYNVMIHGFCSENKPDKIHE 566



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSS--TRDTHLCNTLLDVLLKADRIQD 455
            +G+ ++V +   ++    R GR+  +L+ FN+++      D      L+        I  
Sbjct: 435  EGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGDFVTYTILITSFCNVTNIHK 494

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGG--EVTELVSKLGEHDVFP 281
              +L D+M           LTG    + + +R + G + +G   + + +VSKL E     
Sbjct: 495  AMELFDQM-----------LTGCPTDAKVYRRLISGLSQAGRMEDASFVVSKLKEAGFSM 543

Query: 280  ETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLL 101
            + +    ++   C  +   +  E++  +       ++ + N LLA LG+  D +    + 
Sbjct: 544  DIVSYNVMIHGFCSENKPDKIHEMIEEMEASGVKPDSVTYNTLLAYLGKHGDIESAYKVF 603

Query: 100  AEMKEMGIKPNVITFGILIHHLCKMHRVDEAL 5
              M   G+ P V+TFG LIH  C    +++A+
Sbjct: 604  DRMLNEGVVPTVVTFGTLIHAHCLDGDIEKAM 635


>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 346

 Score =  207 bits (528), Expect = 5e-51
 Identities = 129/341 (37%), Positives = 208/341 (60%), Gaps = 5/341 (1%)
 Frame = -1

Query: 1075 KLLRLHTGGARAARIRSFLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANXXXX 896
            KLLR+    A    +  F+RHF  +++   PP+     +  +     ++    I      
Sbjct: 12   KLLRIFQYHALQPSL--FVRHFCIELAQPSPPQQNDEESTPSPPLQNDES---IIKRAVQ 66

Query: 895  XLQSSDEDWNQEELHRLV-SSIAPTNRLV-QVIRRLGNSAKAVKFFEWIQKN-NSSIFQV 725
             LQ  D +WN  +L+ L+ S+++P+ RL+ Q+ RRL +S++A+KF +++Q N  +S  Q 
Sbjct: 67   LLQIPDHEWNTTQLNNLIFSALSPSPRLLFQIARRLPSSSQALKFLKYLQNNFPTSNTQH 126

Query: 724  LSSPAYHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQ 545
            LSS  + AIF++AS E +S            E  + L+++SA LL+R F R G +E+S  
Sbjct: 127  LSS-TFQAIFELASRENDSRTNLYELYKVSKEWNIPLTINSATLLLRFFGRIGLVEKSFI 185

Query: 544  VFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFP--PNDLTGSIVFSA 371
            +FN+++   ++TH+ N ++D+LL+  R+ D  ++LDEM Q  S F   P+D+TG I+F+ 
Sbjct: 186  LFNELEHCIKNTHVRNLMVDLLLRDGRVDDAFKVLDEMLQPGSEFDLRPDDVTGDIIFTW 245

Query: 370  LLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMR 191
            L+KR    + +S  E+ E+V KLG+ DVFP +I LT+ + +LCR+ NTS+A++LL  LM 
Sbjct: 246  LMKRE---KLVSPEEIVEVVLKLGKFDVFPNSIRLTQTIGQLCRTGNTSKAYDLLIELMT 302

Query: 190  LNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPN 68
            L   ++A  CNALL GLGR+ DF +MN  +A+MK M I P+
Sbjct: 303  LGAAIKAAPCNALLTGLGRDGDFDKMNEFMAKMKVMDIVPD 343


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  207 bits (527), Expect = 7e-51
 Identities = 119/300 (39%), Positives = 177/300 (59%), Gaps = 4/300 (1%)
 Frame = -1

Query: 889 QSSDEDWNQEELHRLVSSIAP--TNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSS 716
           Q   + W+ ++LH ++ + +P  ++  +Q+  +L +  K+++F +++            S
Sbjct: 44  QLPPDHWDHDKLHSILFNPSPLSSHHFLQITLQLSSIPKSLQFLKYLSAKAPQHHPHSLS 103

Query: 715 PAYHAIFDVASHEPNS--HXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQV 542
             +    ++AS  PNS  H              + L+  SA+LL++  E A  + +SL +
Sbjct: 104 SVFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLL 163

Query: 541 FNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLK 362
           FN +D S++   LC+ LL VLLK+ R  D   +LDEM Q +S F    +TG IVF  L++
Sbjct: 164 FNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGF---SVTGEIVFGELVR 220

Query: 361 RSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNG 182
               GR+   GEV  LV+KLGE  VFP+   LT+LV KLC       AWE+LH +MRL G
Sbjct: 221 S---GRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGG 277

Query: 181 PVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            V+A SCNALL  LGR  D +RMN LLAEM++  I+P+V+TFGIL++HLCK  R+DEAL+
Sbjct: 278 AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQ 337



 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
 Frame = -1

Query: 514 DTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMS 335
           D   CN LL  L +   I+ + +LL EM +R     P+ +T  I+ + L K      A+ 
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKR--KIRPSVVTFGILVNHLCKARRIDEALQ 337

Query: 334 GGEVTELVSKLGEH--DVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSC 161
             +   L  K G +   V P+ +L   L+  LC+         LL  +    G +  P+ 
Sbjct: 338 VFD--RLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKM--GNINRPNT 393

Query: 160 ---NALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
              N L+ G  +  +F R + L  +M E G++PNVIT   L+  LCK  RV  A+E
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
 Frame = -1

Query: 628  QGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCN--TLLDVLLKADRIQD 455
            +GV  +V +   L+    + GR+  +++ FN++       +      L+      + I  
Sbjct: 422  EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 454  VQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPET 275
              Q  +EM     S        ++V+ +L+        M+   V  +VSKL       + 
Sbjct: 482  AMQCFEEMLSSGCS------PDAVVYYSLISGLCIAGRMNDASV--VVSKLKLAGFSLDR 533

Query: 274  ILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAE 95
                 L++  C+     + +ELL  +       +  + N L++ LG+  DF   + ++ +
Sbjct: 534  SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEK 593

Query: 94   MKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            M + G++P+V+T+G +IH  C    VDE ++
Sbjct: 594  MIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624


>ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Capsella rubella]
            gi|482561123|gb|EOA25314.1| hypothetical protein
            CARUB_v10018630mg [Capsella rubella]
          Length = 767

 Score =  203 bits (516), Expect = 1e-49
 Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 5/346 (1%)
 Frame = -1

Query: 1024 FLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANXXXXXLQSSDEDW-NQEELHR 848
            FLR FS +I P      PA  +   E+        V+A       +    DW + E L  
Sbjct: 22   FLRRFSDNIEP-----RPAIKSESQES--------VVAKFLENLQRLPQHDWASSESLSS 68

Query: 847  LVSSIAPTNRLV--QVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAY--HAIFDVASH 680
            L+ S +  + LV  Q+ RRLG+ + A+ FFE++   + S+ +   S +    ++ + A  
Sbjct: 69   LLVSSSSVSPLVFPQITRRLGSYSLAISFFEYLDATSQSLKRREESLSLTLQSVIEFAGS 128

Query: 679  EPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLC 500
            EP+S            E+ +  +V +  LLIR F R G + +S+ V+  +DS+ ++T + 
Sbjct: 129  EPDSQDKLLQLYEIAIEKNIPFTVVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNTQVR 188

Query: 499  NTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVT 320
            N +++VLL+   + D  ++LDEM Q+DS FPPN +T  IV   + K    G+ ++   + 
Sbjct: 189  NVVIEVLLRNGLVDDAFKVLDEMFQKDSVFPPNRITADIVLHEVWK----GKLLTEENII 244

Query: 319  ELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGL 140
             L+S+   H V P ++ LT+ +T LC++  T+ AW++L  LM  N P+EAP  N LL+ L
Sbjct: 245  GLISRFSSHGVSPNSVWLTRFITSLCKNGRTNAAWDILSDLMENNAPLEAPPFNTLLSCL 304

Query: 139  GREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            GR  +  RMN L+ +M EMGI+P+V+T G+LI+ LCK  R+DEALE
Sbjct: 305  GRNMNIGRMNALVLKMDEMGIRPDVVTLGVLINTLCKSRRIDEALE 350



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 28/109 (25%), Positives = 59/109 (54%)
 Frame = -1

Query: 328 EVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALL 149
           +V  +V KL E     + +    L+   C  +NT + +E+L  + +     ++ + N L+
Sbjct: 529 DVIRVVEKLKERGFSLDLLAYNMLIGLFCDKNNTEKVYEMLRDMEKEGMKPDSITYNTLI 588

Query: 148 AGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
           +  G+  DF+ +  ++ EM+E G+ P V+T+G +I   C +  ++EA++
Sbjct: 589 SFFGKLKDFESVQRMMEEMREDGLDPTVVTYGAVIDAYCSVGELNEAVK 637


>ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutrema salsugineum]
            gi|557110621|gb|ESQ50912.1| hypothetical protein
            EUTSA_v10022571mg [Eutrema salsugineum]
          Length = 766

 Score =  201 bits (511), Expect = 5e-49
 Identities = 126/350 (36%), Positives = 191/350 (54%), Gaps = 9/350 (2%)
 Frame = -1

Query: 1024 FLRHFSADISPIEPP----EAPASVAAQTEAKTKEKPNWVIANXXXXXLQSSDEDW-NQE 860
            FLR FSAD+ P  PP    E+  SV  Q     ++ P                 DW + E
Sbjct: 22   FLRRFSADVYP--PPGIKSESQKSVEVQFLDNLQKIPQ---------------HDWVSSE 64

Query: 859  ELHRLVSSIAPTNRLV--QVIRRLGNSAKAVKFFEWIQKNNSSIF--QVLSSPAYHAIFD 692
             L  L++S +  + LV  Q+ RRLG+ + AV FFE++   + S+   +   S  + ++ +
Sbjct: 65   SLSSLLASSSSVSPLVFSQITRRLGSYSLAVSFFEYLDAKSQSLERREDALSLVFQSVIE 124

Query: 691  VASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRD 512
             A  EP+S            E+ + L+V +  LLIR F R G   +S+ V+  +DS+ ++
Sbjct: 125  FAGSEPDSRDKLLRLYEIAKEKNIPLTVVATKLLIRWFGRMGMANQSILVYEQLDSNMQN 184

Query: 511  THLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSG 332
            T + N ++DVLLK     D  ++LDEM +++S FPPN +T  IVF  + +    G  +  
Sbjct: 185  TQVRNVVIDVLLKNGLADDAFKVLDEMLRKESVFPPNRITADIVFHEVWR----GMLLKE 240

Query: 331  GEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNAL 152
             E+  L+S+   H V P  + LT+ +T  CR++    AWE+L  LM+   P++APS NAL
Sbjct: 241  DEIIRLISRFSSHGVSPSCVWLTRFITSQCRNARVDVAWEILSDLMKNKAPLQAPSFNAL 300

Query: 151  LAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            L  LGR  D  RMN +  +M EM I+P+V+T GILI+ LCK  +VDEAL+
Sbjct: 301  LTFLGRNMDIGRMNAIALKMDEMEIRPDVVTLGILINTLCKSRKVDEALQ 350


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
           gi|449475521|ref|XP_004154479.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  201 bits (510), Expect = 7e-49
 Identities = 101/205 (49%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
 Frame = -1

Query: 613 SVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLCNTLLDVLLKADRIQDVQQLLDE 434
           +  S+  L+RR  R G ++E+L  F+ +DS  ++T++ N ++++LLK+ R+ +   +LDE
Sbjct: 5   TAQSSVHLLRRLGRIGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDE 64

Query: 433 MHQRDSSFPPNDLTGSIVFSALLK-RSLPGRAMSGGEVTELVSKLGEHDVFPETILLTKL 257
           M   +S F PND T  IVF+ LLK   L GR     E+  LVSK G+H++FP+TI LT+L
Sbjct: 65  MLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKED-EIAGLVSKFGKHNIFPDTIALTQL 123

Query: 256 VTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMGI 77
           ++KLCRS NT+ AW +L +LM LNG  +A  CNALL GLG+  +F +MNLL+ +MK+M I
Sbjct: 124 ISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNI 183

Query: 76  KPNVITFGILIHHLCKMHRVDEALE 2
           +P VITFGILI+HLCK  R+D+ALE
Sbjct: 184 QPTVITFGILINHLCKFRRIDDALE 208



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
 Frame = -1

Query: 607 DSAAL--LIRRFERAGRIEESLQVFNDVD--SSTRDTHLCNTLLDVLLKADRIQDVQQLL 440
           D+ AL  LI +  R+G    +  + +++   +  +D   CN LL  L KA     +  L+
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLM 175

Query: 439 DEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVTELVSKLGEHDVFPETILLTK 260
            +M  +D +  P  +T  I+ + L K      A+   E  +   +  +  V P+TI+   
Sbjct: 176 RKM--KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233

Query: 259 LVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGLGREWDFQRMNLLLAEMKEMG 80
           L+  LC+     +A  L+  +          + N L+ G  R  + +  + L  EM+   
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293

Query: 79  IKPNVITFGILIHHLCKMHRVDEALE 2
           I+PNVIT   L+  +CK +R+  A+E
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVE 319


>ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75183498|sp|Q9M316.1|PP292_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g61520, mitochondrial; Flags: Precursor
            gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis
            thaliana] gi|332646696|gb|AEE80217.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  200 bits (508), Expect = 1e-48
 Identities = 121/346 (34%), Positives = 194/346 (56%), Gaps = 5/346 (1%)
 Frame = -1

Query: 1024 FLRHFSADISPIEPPEAPASVAAQTEAKTKEKPNWVIANXXXXXLQSSDEDW-NQEELHR 848
            FLR FS D+ P            + E K  E   +V+        ++   DW + E L  
Sbjct: 22   FLRRFSYDVDP------------RPEIKL-ESQEFVVVKFVKTLQKTPQHDWASSESLSA 68

Query: 847  LVSSIAPTNRLV--QVIRRLGNSAKAVKFFEWIQKNNSSIF--QVLSSPAYHAIFDVASH 680
            LV S +  + LV  Q+ RRLG+ + A+ FFE++   + S+   +   S A  ++ + A  
Sbjct: 69   LVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGS 128

Query: 679  EPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDVDSSTRDTHLC 500
            EP+             E+ + L+V +  LLIR F R G + +S+ V+  +DS+ +++ + 
Sbjct: 129  EPDPRDKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR 188

Query: 499  NTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLPGRAMSGGEVT 320
            N ++DVLL+   + D  ++LDEM Q++S FPPN +T  IV   + K    GR ++  ++ 
Sbjct: 189  NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK----GRLLTEEKII 244

Query: 319  ELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEAPSCNALLAGL 140
             L+S+   H V P ++ LT+ ++ LC+++  + AW++L  LM+   P+EAP  NALL+ L
Sbjct: 245  ALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304

Query: 139  GREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEALE 2
            GR  D  RMN L+ +M E+ I+P+V+T GILI+ LCK  RVDEALE
Sbjct: 305  GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350


>ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 883

 Score =  199 bits (507), Expect = 1e-48
 Identities = 110/295 (37%), Positives = 169/295 (57%)
 Frame = -1

Query: 889 QSSDEDWNQEELHRLVSSIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPA 710
           Q +++DWN ++L  L+ S                             N++S      S A
Sbjct: 62  QPNEKDWNFDQLQTLLFS-----------------------------NSTSPSPHSLSSA 92

Query: 709 YHAIFDVASHEPNSHXXXXXXXXXXXEQGVSLSVDSAALLIRRFERAGRIEESLQVFNDV 530
             A+ ++   E  S            E+ V L+V++AALLIR  ER G  EE L VF ++
Sbjct: 93  LQAVLELTLRERISEKKLFELYQMAKERNVELNVNTAALLIRSLERDGMEEEGLVVFKEL 152

Query: 529 DSSTRDTHLCNTLLDVLLKADRIQDVQQLLDEMHQRDSSFPPNDLTGSIVFSALLKRSLP 350
           DS  + TH+ N ++ +L+   R+ D  ++LDEM   ++ F  +++T  IV  +LL +   
Sbjct: 153 DSELKSTHIRNVVIKMLVNMGRVDDALKVLDEMLDPEAQFRVDEITADIVIGSLLGKEKK 212

Query: 349 GRAMSGGEVTELVSKLGEHDVFPETILLTKLVTKLCRSSNTSQAWELLHSLMRLNGPVEA 170
           GR +   E+  LVSK G+H VFP++ +LTKLVT LCR+   S+AW++L  +M++ G +EA
Sbjct: 213 GRGVGEEEIVGLVSKFGKHGVFPDSRILTKLVTVLCRNGKVSRAWDVLCDVMKMGGGLEA 272

Query: 169 PSCNALLAGLGREWDFQRMNLLLAEMKEMGIKPNVITFGILIHHLCKMHRVDEAL 5
            SCNA+L  LGR  DF+RM  ++ +M+E+GIKPN+ITFG+ ++HLCK  R+D AL
Sbjct: 273 ASCNAVLTALGRSNDFKRMGEVMVKMEEIGIKPNLITFGLFVNHLCKSRRIDAAL 327