BLASTX nr result
ID: Sinomenium22_contig00021926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00021926
(313 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA73803.1| reverse transcriptase [Allium cepa] 77 2e-12
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 75 9e-12
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 1e-11
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 74 2e-11
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 71 1e-10
gb|ABD96942.1| hypothetical protein [Cleome spinosa] 71 1e-10
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 71 2e-10
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 71 2e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 71 2e-10
gb|EPS64876.1| hypothetical protein M569_09903, partial [Genlise... 70 2e-10
emb|CAA12932.1| reverse transcriptase [Pinus elliottii] 70 2e-10
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 70 2e-10
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 70 3e-10
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 70 3e-10
ref|XP_002468277.1| hypothetical protein SORBIDRAFT_01g042855 [S... 70 4e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 69 5e-10
ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, part... 69 5e-10
ref|XP_007044602.1| Retrotransposon protein, unclassified, putat... 69 7e-10
ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part... 69 7e-10
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 69 7e-10
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/77 (44%), Positives = 57/77 (74%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P++ CN++YK +KVLA++LK + LVS QAA++ R+I D++LL+H++++G+ R
Sbjct: 3 FRPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRK 62
Query: 126 QAGLASLLKFDMMKAYD 76
A ++LK D+MKA+D
Sbjct: 63 SATPRAMLKLDIMKAFD 79
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = -2
Query: 309 DFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR 130
DF P++ CN +YKV +K++AN+LK ++ VS QAAF+K R + +N+LLA +++R +++
Sbjct: 2 DFRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYNK 61
Query: 129 *QAGLASLLKFDMMKAYD--C**FACFFLKQTRFP 31
+S+LK D+ KA+D C F L+ FP
Sbjct: 62 SSCLRSSMLKVDIRKAFDTVCWDFVIKILRAQGFP 96
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/79 (41%), Positives = 53/79 (67%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P+A C++LYK+ +K+L +L+ + +V Q FI ERHI DNILLA +++RG++
Sbjct: 515 KDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYN 574
Query: 132 R*QAGLASLLKFDMMKAYD 76
R ++K D+ KAYD
Sbjct: 575 RRHVSPRCVIKVDIRKAYD 593
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/79 (40%), Positives = 56/79 (70%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P++ CN LYK+ +K++AN+LKE + ++ Q+AFIK+R + +N+LLA ++V+ +H
Sbjct: 674 KDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYH 733
Query: 132 R*QAGLASLLKFDMMKAYD 76
+ S LK D+ KA+D
Sbjct: 734 KESISSRSALKIDISKAFD 752
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
++F P+A C +YK+ +K+L N++K + +V+ Q+ FI RHI DNILLA +++RG+
Sbjct: 512 KEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYT 571
Query: 132 R*QAGLASLLKFDMMKAYD 76
R ++K D+ KAYD
Sbjct: 572 RKHMSPRCIMKVDIRKAYD 590
>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
Length = 402
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = -2
Query: 309 DFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR 130
DF P++ CN LYKV +K++AN+L+ + L+S QAAF K R + D+I+LA ++V+ ++R
Sbjct: 32 DFRPISCCNFLYKVISKIIANRLQLLLPWLISGNQAAFQKGRSMGDHIMLAAELVKDYNR 91
Query: 129 *QAGLASLLKFDMMKAYD 76
A +++LK D+ KA+D
Sbjct: 92 PSAEPSAMLKIDIKKAFD 109
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D P+++CN LYK+ +KVLAN+LK+ + ++S+ Q+AF+ R I DN+LLA+++V
Sbjct: 83 KDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLK 142
Query: 132 R*QAGLASL--LKFDMMKAYD 76
+ G L +K DM KAYD
Sbjct: 143 SIKKGAGGLAAIKLDMSKAYD 163
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/79 (37%), Positives = 54/79 (68%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P++ CN LYKV +K++AN+LK + ++ Q+AFIK+R + +N+LLA ++V+ +H
Sbjct: 45 KDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYH 104
Query: 132 R*QAGLASLLKFDMMKAYD 76
+ +K D+ KA+D
Sbjct: 105 KDSVSERCAIKIDISKAFD 123
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P++ CN LYKV +K+LAN+LK + + Q+AF+KER + +N+LLA ++V+ +H
Sbjct: 824 KDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYH 883
Query: 132 R*QAGLASLLKFDMMKAYD 76
+ +K D+ KA+D
Sbjct: 884 KESVTPRCAMKIDISKAFD 902
>gb|EPS64876.1| hypothetical protein M569_09903, partial [Genlisea aurea]
Length = 842
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P+++CN LYK+ +K++AN+LK + L++ EQ+AF+ R I DN+L+A ++ R
Sbjct: 352 FRPISLCNVLYKIASKMVANRLKPIMDSLITEEQSAFLPGRAIADNVLMAFEINHSLRRN 411
Query: 126 QAGLASLLKFDMMKAYD 76
Q+ + LK D+ KAYD
Sbjct: 412 QSSIFGSLKLDVSKAYD 428
>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
Length = 194
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/80 (43%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
E F P+A+CN +YK+ +KV+AN+LK + ++S EQ+ +++ R I DNILLA +++ H
Sbjct: 58 EKFRPIALCNVIYKIISKVIANRLKIILPGIISQEQSGYVEGRQILDNILLAQEMIHSLH 117
Query: 132 -R*QAGLASLLKFDMMKAYD 76
R AG+ L++ D+ KAYD
Sbjct: 118 SRKVAGM--LIQLDLSKAYD 135
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/79 (37%), Positives = 53/79 (67%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P++ CN LYKV +K++AN+LK + + Q+AF+K+R + +N+LLA ++V+ +H
Sbjct: 415 KDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYH 474
Query: 132 R*QAGLASLLKFDMMKAYD 76
+ LK D+ KA+D
Sbjct: 475 KDSVSSRCALKIDISKAFD 493
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P++ CN LYK+ +K+LAN++ ++ ++ Q AFIK R + DNI L +++R + R
Sbjct: 885 FRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARK 944
Query: 126 QAGLASLLKFDMMKAYD 76
+ LLK D+ KAYD
Sbjct: 945 RPSPRCLLKIDLHKAYD 961
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 309 DFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR 130
DF P++ CN+ YK+ AK+LAN+LK + ++V Q+ FI R I DNILLA +++ +H+
Sbjct: 349 DFRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHK 408
Query: 129 *QAGLASLLKFDMMKAYD 76
DMMKA D
Sbjct: 409 ADGQPRCTFMVDMMKAND 426
>ref|XP_002468277.1| hypothetical protein SORBIDRAFT_01g042855 [Sorghum bicolor]
gi|241922131|gb|EER95275.1| hypothetical protein
SORBIDRAFT_01g042855 [Sorghum bicolor]
Length = 575
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+DF P+++CN +YK+ AK LA++LK + + QAAFIK RHI NI++ +++ +H
Sbjct: 84 QDFRPISLCNVIYKIIAKSLADRLKPHLPNYIDRSQAAFIKNRHISANIIITQEIIHSFH 143
Query: 132 -R*QAGLASLLKFDMMKAYD 76
+ A LLK D+ KA+D
Sbjct: 144 LKSWKDQAFLLKLDLAKAFD 163
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/79 (36%), Positives = 54/79 (68%)
Frame = -2
Query: 312 EDFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWH 133
+D+ P++ CN LYKV +K++AN+LK + ++ Q+AF+K+R + +N+LLA ++V+ +H
Sbjct: 527 KDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYH 586
Query: 132 R*QAGLASLLKFDMMKAYD 76
+ +K D+ KA+D
Sbjct: 587 KDTISTRCAIKIDISKAFD 605
>ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
gi|462416064|gb|EMJ20801.1| hypothetical protein
PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P+++CN+ YK+ +K+LAN+LK + +L+S Q AFI R IQDNILLAH+ + R
Sbjct: 111 FRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFIPGRQIQDNILLAHEAFH-YLRL 169
Query: 126 QAGLASL---LKFDMMKAYD 76
++ S LK DM KAYD
Sbjct: 170 KSSKKSFELGLKLDMNKAYD 189
>ref|XP_007044602.1| Retrotransposon protein, unclassified, putative [Theobroma cacao]
gi|508708537|gb|EOY00434.1| Retrotransposon protein,
unclassified, putative [Theobroma cacao]
Length = 421
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P+++CN +YK+ +KVLAN+LK + +++S+ Q+ F+ R I DN ++AH+V+ H
Sbjct: 85 FRPISLCNVIYKIASKVLANRLKSILPVIISANQSPFVLGRLILDNGIVAHEVIHYLHNK 144
Query: 126 QAGLAS--LLKFDMMKAYD 76
+ G LK DM KAYD
Sbjct: 145 RVGKVGNFALKLDMSKAYD 163
>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
gi|462403223|gb|EMJ08780.1| hypothetical protein
PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = -2
Query: 306 FGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR* 127
F P+++CN+ YK+ +K+LAN+LK + +L+S Q AF+ R IQDNILLAH+ + R
Sbjct: 415 FRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFVPGRQIQDNILLAHEAFH-YLRL 473
Query: 126 QAGLASL---LKFDMMKAYD 76
++ S LK DM KAYD
Sbjct: 474 KSSKKSFELGLKLDMNKAYD 493
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/78 (37%), Positives = 53/78 (67%)
Frame = -2
Query: 309 DFGPVAVCNSLYKVFAKVLANKLKEAVQILVSSEQAAFIKERHIQDNILLAHKVVRGWHR 130
D+ P++ CN LYKV +K++AN+LK + ++ Q+AF+K+R + +N+LLA ++V+ +H+
Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHK 234
Query: 129 *QAGLASLLKFDMMKAYD 76
+K D+ KA+D
Sbjct: 235 DSISARCAIKIDISKAFD 252