BLASTX nr result
ID: Sinomenium22_contig00021818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00021818
(621 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36896.3| unnamed protein product [Vitis vinifera] 73 8e-11
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 73 8e-11
ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao... 72 1e-10
ref|XP_004953853.1| PREDICTED: probable ATP-dependent RNA helica... 64 5e-08
ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helica... 62 1e-07
ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helica... 62 1e-07
ref|XP_007051013.1| RNA helicase family protein, putative [Theob... 62 1e-07
ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [S... 62 1e-07
gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays] 61 2e-07
gb|EYU46759.1| hypothetical protein MIMGU_mgv1a000378mg [Mimulus... 60 5e-07
ref|XP_004294749.1| PREDICTED: probable ATP-dependent RNA helica... 59 9e-07
ref|XP_007226436.1| hypothetical protein PRUPE_ppa023627mg, part... 59 9e-07
gb|EPS69548.1| hypothetical protein M569_05217, partial [Genlise... 59 2e-06
ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helica... 59 2e-06
ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Popu... 58 2e-06
ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group] g... 58 2e-06
gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japo... 58 2e-06
gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilop... 58 3e-06
gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticu... 57 3e-06
ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helica... 57 4e-06
>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
Length = 1098
Score = 72.8 bits (177), Expect = 8e-11
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGRE--- 342
TLEK+KI+EDA SLL SS +GQVETTLEKRRRA++ SK GL P DRP K + E
Sbjct: 82 TLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDGEMEP 141
Query: 341 -GGCYQSKPHPDKS 303
QSK D+S
Sbjct: 142 DSNKIQSKQEFDES 155
>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
vinifera]
Length = 1414
Score = 72.8 bits (177), Expect = 8e-11
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGRE--- 342
TLEK+KI+EDA SLL SS +GQVETTLEKRRRA++ SK GL P DRP K + E
Sbjct: 161 TLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDGEMEP 220
Query: 341 -GGCYQSKPHPDKS 303
QSK D+S
Sbjct: 221 DSNKIQSKQEFDES 234
>ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao]
gi|508726880|gb|EOY18777.1| RNA helicase family protein
[Theobroma cacao]
Length = 1389
Score = 72.4 bits (176), Expect = 1e-10
Identities = 40/86 (46%), Positives = 50/86 (58%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGC 333
TLEK+KI EDA SLL SS IG ET EKRRR ++ SK GL P D+ SK RG
Sbjct: 152 TLEKYKISEDAYSLLQSSKTIGLAETMREKRRRVVQFSKAGLEPPYVDKSSKGRGGNNSS 211
Query: 332 YQSKPHPDKSHLRLDHYKVETYSEPL 255
S+P P+ ++ K+ T +PL
Sbjct: 212 SSSEPEPEPELEEINSRKLSTDGQPL 237
>ref|XP_004953853.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Setaria
italica]
Length = 1286
Score = 63.5 bits (153), Expect = 5e-08
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGCY 330
L+KHKI EDA SLL +SG IGQVET EKRRRA++LSK GL P++ K+ G +
Sbjct: 61 LQKHKISEDAYSLLHASGTIGQVETLKEKRRRAMQLSKAGLDVPEELSLFKRNGDQKFSE 120
Query: 329 QSKP 318
S P
Sbjct: 121 NSDP 124
>ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Solanum
lycopersicum]
Length = 1341
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKR 351
TL+KH+IQ+D SL+ SS +GQ ET+ EKRRR I+ S+ GL P DRP KKR
Sbjct: 80 TLKKHQIQDDVYSLMWSSRNLGQGETSREKRRREIQFSRAGLDVPHRDRPVKKR 133
>ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Solanum
tuberosum]
Length = 1336
Score = 62.0 bits (149), Expect = 1e-07
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKR 351
TL+KH+IQ+D SL+ SS +GQ ET EKRRR I+ S+ GL P DRP KKR
Sbjct: 80 TLKKHQIQDDVYSLMWSSRNLGQGETNREKRRREIQFSRAGLDVPHRDRPVKKR 133
>ref|XP_007051013.1| RNA helicase family protein, putative [Theobroma cacao]
gi|508703274|gb|EOX95170.1| RNA helicase family protein,
putative [Theobroma cacao]
Length = 1264
Score = 62.0 bits (149), Expect = 1e-07
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGC 333
TLEK+KI EDA SLL SS IG ET EKRRRA++ K GL P D+ SK R +
Sbjct: 82 TLEKYKIPEDAYSLLRSSKTIGLAETMREKRRRAVQFLKAGLELPYVDQSSKGRDGDNLS 141
Query: 332 YQSKPHPD 309
S+P P+
Sbjct: 142 SSSEPEPE 149
>ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [Sorghum bicolor]
gi|241934150|gb|EES07295.1| hypothetical protein
SORBIDRAFT_04g028590 [Sorghum bicolor]
Length = 1284
Score = 62.0 bits (149), Expect = 1e-07
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRG 348
L+KHKI EDA SLL +SG IGQ ET EKRRRA++ SK GL P++ KK G
Sbjct: 70 LQKHKISEDAHSLLHASGTIGQAETLKEKRRRAVQFSKAGLDIPEELSLFKKNG 123
>gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays]
Length = 1287
Score = 61.2 bits (147), Expect = 2e-07
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRG 348
L+KHKI EDA SLL +SG IGQ ET EKRRRA++ SK GL P++ KK G
Sbjct: 70 LQKHKISEDAYSLLHASGTIGQAETLKEKRRRAVQFSKAGLDVPEELSLFKKSG 123
>gb|EYU46759.1| hypothetical protein MIMGU_mgv1a000378mg [Mimulus guttatus]
Length = 1204
Score = 60.1 bits (144), Expect = 5e-07
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGRE 342
TLEK+K+ ED SL+ SS +GQVET EKRRR ++ +K GL P D+P KR E
Sbjct: 32 TLEKYKLGEDVYSLMWSSRNLGQVETVREKRRREMEFAKAGLELPDSDQPFAKRRNE 88
>ref|XP_004294749.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Fragaria
vesca subsp. vesca]
Length = 1320
Score = 59.3 bits (142), Expect = 9e-07
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGCY 330
L K+K+ E SLL SS IGQVE+ E+RR+A+ SK L P D+P KK+ C
Sbjct: 82 LGKYKLPEGVHSLLQSSKDIGQVESKKERRRKAVLFSKARLEVPYTDQPFKKKVDVDACS 141
Query: 329 QSKPHPDKSHLRLD 288
+S+P +++ R D
Sbjct: 142 ESEPESERTRSRQD 155
>ref|XP_007226436.1| hypothetical protein PRUPE_ppa023627mg, partial [Prunus persica]
gi|462423372|gb|EMJ27635.1| hypothetical protein
PRUPE_ppa023627mg, partial [Prunus persica]
Length = 1391
Score = 59.3 bits (142), Expect = 9e-07
Identities = 36/87 (41%), Positives = 49/87 (56%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGCY 330
LEK+K+ E A SLL SS IG+VE+ EKRR+A+ SK G P D+P KK E
Sbjct: 65 LEKYKLPEGAHSLLQSSKNIGKVESKKEKRRKAVLFSKAGFGVPLTDQPFKKIDSESES- 123
Query: 329 QSKPHPDKSHLRLDHYKVETYSEPLDP 249
+S+P +K+ R D K + + P
Sbjct: 124 ESEPELEKTQSRSDLCKNDQVQSKIVP 150
>gb|EPS69548.1| hypothetical protein M569_05217, partial [Genlisea aurea]
Length = 1130
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKR 351
LEK++I++D SL+ SS +GQVET EKRRR + SK GL P+ D P KK+
Sbjct: 30 LEKYRIRDDVYSLMWSSRNLGQVETLREKRRREFEFSKAGLELPESDHPLKKK 82
>ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Setaria
italica]
Length = 1287
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQD 372
L+KHKI EDA SLL +SG IGQVET EK RRA++LSK GL P++
Sbjct: 62 LQKHKISEDAYSLLHASGTIGQVETLKEKCRRAMQLSKAGLDVPEE 107
>ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Populus trichocarpa]
gi|550345446|gb|EEE82006.2| hypothetical protein
POPTR_0002s20250g [Populus trichocarpa]
Length = 1198
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKK 354
TLEK+KI EDA SLL SS I +VET EKRR A++ SK GL +PQ D+P K+
Sbjct: 37 TLEKYKIPEDAFSLLQSSRNISRVETVKEKRRMAVQFSKAGL-SPQGDQPFKR 88
>ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group]
gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
sativa Japonica Group] gi|113537586|dbj|BAF09969.1|
Os02g0736600 [Oryza sativa Japonica Group]
gi|215768291|dbj|BAH00520.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1272
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRG 348
L KHKI +DA SLL +SG IGQ ET EKRRRA+ SK GL P++ KK G
Sbjct: 61 LRKHKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKKDG 114
>gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japonica Group]
Length = 926
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRG 348
L KHKI +DA SLL +SG IGQ ET EKRRRA+ SK GL P++ KK G
Sbjct: 61 LRKHKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKKDG 114
>gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilops tauschii]
Length = 1337
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGGC 333
TL+KH+I ++A SLL +SG IGQ T EKRRRA++LSK GL P++ KK + G
Sbjct: 116 TLQKHRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNSDQKGV 175
Query: 332 YQSKPHPDKS 303
P P+ S
Sbjct: 176 ----PVPENS 181
>gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticum urartu]
Length = 1249
Score = 57.4 bits (137), Expect = 3e-06
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2
Query: 512 TLEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGREGG 336
TL+KH+I ++A SLL +SG IGQ T EKRRRA++LSK GL P++ KK + G
Sbjct: 116 TLQKHRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNSDQTG 174
>ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like
[Brachypodium distachyon]
Length = 1273
Score = 57.0 bits (136), Expect = 4e-06
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -2
Query: 509 LEKHKIQEDARSLLLSSGKIGQVETTLEKRRRAIKLSKVGLVAPQDDRPSKKRGRE 342
L KH+I +DA +LL +SG IGQ ET EKRRRA++ SK GL P++ KK R+
Sbjct: 65 LRKHRIADDAYALLQTSGSIGQAETMKEKRRRAVQFSKAGLDVPEELSLFKKNCRQ 120