BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00021392
         (1496 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...   121   9e-46
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               103   9e-42
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    97   2e-39
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...   104   3e-39
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                96   5e-39
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    92   6e-37
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]       100   4e-35
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    87   2e-34
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    97   5e-34
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            97   5e-34
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            89   2e-33
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   100   3e-33
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    92   7e-33
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    88   2e-32
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        84   8e-31
ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobrom...    80   4e-29
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              80   5e-28
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              80   7e-28
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              80   3e-27
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...    71   3e-27

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score =  121 bits (304), Expect(3) = 9e-46
 Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
 Frame = +3

Query: 273 KMISLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLI 449
           K +S W+V+E     SW+WRK++ FR  A  + K  I N     +W D W   G LI   
Sbjct: 161 KKVSFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRLIDSA 220

Query: 450 PDLMRRNSSVDIEXXXXXXXXXXXXPRSP---LHRFQNDISILEKFPNSHEDKILWTTTP 620
            D    +  ++               R     L+R +  + +     N  ED+ LW    
Sbjct: 221 GDRGAIDLGINKHATVVEAWGNRRRRRHRTNFLNRVEERLILSWNSRNQAEDRALWKGKE 280

Query: 621 S---GVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLG 791
           +    +FSTK  WN IR   +KV+W   VWF   IP+HAF +W   H +L T  R+    
Sbjct: 281 NRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWN 340

Query: 792 LIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVR 899
           + +DA   LC    E+ DHLFF CP    +W+ + +
Sbjct: 341 MGVDATCILCNKALESRDHLFFSCPFATEIWEPLAK 376



 Score = 86.7 bits (213), Expect(3) = 9e-46
 Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGN-LNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           +W G F LP   I+ I+ M S++L  G  LN  K ++ +W  +CKP+ EGG+GLR +KE 
Sbjct: 73  FWMGAFRLPRDCIREIDKMCSAYLWSGGELNTSKAKI-TWAFVCKPKEEGGLGLRSLKEA 131

Query: 185 NMAGIIKLVWWIVSNKQCLWVKWVQTRFLK 274
           N    +KL+W I+S+   LWVKW+Q+  LK
Sbjct: 132 NDVCCLKLIWRIISHADSLWVKWIQSSLLK 161



 Score = 25.0 bits (53), Expect(3) = 9e-46
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 994  LVKLAFQGAIYHIWYERNKRK 1056
            L +   Q  IY +W ERN+RK
Sbjct: 406  LARCILQVTIYTLWRERNERK 426


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  103 bits (256), Expect(3) = 9e-42
 Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
 Frame = +3

Query: 282  SLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDL 458
            S+WS+K+     SW+WRK++  R  A    +  +GN  S  +W D W   G LI  + D 
Sbjct: 562  SIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGD- 620

Query: 459  MRRNSSVDIEXXXXXXXXXXXXPRSPL-HRFQ--NDISILEKFPNSH----EDKILWTTT 617
                 ++D+              RS   HR    N+I  +  +   H    ED +LW   
Sbjct: 621  ---KGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAYQRIHHSDAEDTVLWRGK 677

Query: 618  PSGV---FSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARL--- 779
                   FST+  W+LI+   S VSW   VWF++  P++A   W   H +LPT  R+   
Sbjct: 678  NDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKW 737

Query: 780  NRLGLIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVR 899
            N  G  +  +  LC    +  +HLFF C   + VW ++ +
Sbjct: 738  NSSG-SVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAK 776



 Score = 84.7 bits (208), Expect(3) = 9e-42
 Identities = 37/83 (44%), Positives = 52/83 (62%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
           +W   F LP + I+ I+ + SSFL  G+        +SW+ +CKP++EGG+GLR +KE N
Sbjct: 471 FWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEAN 530

Query: 188 MAGIIKLVWWIVSNKQCLWVKWV 256
               +KLVW I+SN   LW KWV
Sbjct: 531 DVSCLKLVWRIISNSNSLWTKWV 553



 Score = 32.0 bits (71), Expect(3) = 9e-42
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 955  ILKHFHDSPCISLLVKLAFQGAIYHIWYERNKRK 1056
            I  HF D      L +  FQ  IYH+W ERN R+
Sbjct: 794  ISTHFQDR-VEGFLTRYIFQATIYHVWRERNGRR 826


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 97.4 bits (241), Expect(3) = 2e-39
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
 Frame = +3

Query: 282  SLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDL 458
            S W VK+ V   SW+W+K++ +R+ A  + K  +GN     +W D W   G L++   D 
Sbjct: 915  SFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERTGD- 973

Query: 459  MRRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDI-----SILEKFPNSH---EDKILWTT 614
                  +D+              R    R +ND+       L+K  ++    EDK+LW  
Sbjct: 974  ---RGLIDLGISRRMTVEEAWTNRRQ-RRHRNDVYNVIEDALKKSWDTRTETEDKVLWRG 1029

Query: 615  TPS---GVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNR 785
                    FST+  W+  R   ++V W   +WF +  P+++F  W   H +LPT  R+  
Sbjct: 1030 KSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMIN 1089

Query: 786  LGLIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVR 899
                I      C    E  DHLFF C  T+ +W  + R
Sbjct: 1090 WANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLAR 1127



 Score = 89.0 bits (219), Expect(3) = 2e-39
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGN-LNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
            +W   F LP K I+ +E M S+FL  G  +N  K ++ SW  +CKP+ EGG+GLR +KE 
Sbjct: 824  FWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKI-SWHMVCKPKDEGGLGLRSLKEA 882

Query: 185  NMAGIIKLVWWIVSNKQCLWVKWVQTRFLKN 277
            N    +KLVW IVS+   LWVKWV    L+N
Sbjct: 883  NDVCCLKLVWKIVSHSNSLWVKWVDQHLLRN 913



 Score = 25.4 bits (54), Expect(3) = 2e-39
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 994  LVKLAFQGAIYHIWYERNKRK 1056
            L +  FQ  IY +W ERN R+
Sbjct: 1157 LRRYVFQATIYIVWRERNGRR 1177


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score =  104 bits (259), Expect(2) = 3e-39
 Identities = 68/225 (30%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
 Frame = +3

Query: 273 KMISLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLI 449
           K +  W+V+E     SW+WRK++ FR  A  + K  I N     +W D W   G LI+  
Sbjct: 242 KKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIESA 301

Query: 450 PDLMRRNSSVDIEXXXXXXXXXXXXPRSP---LHRFQNDISILEKFPNSHEDKILWTTTP 620
            D    +  ++               R     L+R +  + +     N  ED  LW    
Sbjct: 302 GDRGAIDLGINKHATVVEAWGNRRRRRHRANFLNRVEERLVLSWNSRNQAEDCALWKGKE 361

Query: 621 S---GVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLG 791
           +    +FSTK  WN IR   +KV+W   VWF   IP+HAF +W   H +L T  R+    
Sbjct: 362 NRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWN 421

Query: 792 LIIDAHYSLCWAGRENEDHL--FFYCPLTNFVWQSVVRNFSLHYR 920
           + +DA   LC    E+ DHL   F+  L N   Q + +    H R
Sbjct: 422 MGVDATCILCNNALESRDHLQHLFFHGLANHHQQRLTQLAGSHCR 466



 Score = 86.7 bits (213), Expect(2) = 3e-39
 Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGN-LNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           +W G F LP   I+ I+ M S++L  G  LN  K ++ +W  +CKP+ EGG+GLR +KE 
Sbjct: 154 FWMGAFRLPRDCIREIDKMCSAYLWSGGELNTSKAKI-AWAFVCKPKEEGGLGLRSLKEA 212

Query: 185 NMAGIIKLVWWIVSNKQCLWVKWVQTRFLK 274
           N    +KL+W I+S+   LWVKW+Q+  LK
Sbjct: 213 NDVCCLKLIWRIISHADSLWVKWIQSSLLK 242


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 95.9 bits (237), Expect(2) = 5e-39
 Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
 Frame = +3

Query: 288  WSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMR 464
            W VKE  +  SW+W+K++ +R  A    K  +GN  S  +W D W   G LI    D+  
Sbjct: 470  WIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSFWFDDWSLLGRLI----DVAG 525

Query: 465  RNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKFPNSHEDK---------ILW--- 608
               ++D+              R   H  Q  ++ +E+  ++   K         +LW   
Sbjct: 526  IRGTIDMGISRTMSVADAWTSRRRRHHRQEILNTIEEVLSTQHQKRTQQQQQGRVLWKGK 585

Query: 609  TTTPSGVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRL 788
                   FSTK+ WN +R   ++V+W   VWF +  P+++F +W   H++L T AR+ + 
Sbjct: 586  NDIYKDKFSTKNTWNYLRTTSNEVAWHKGVWFPHATPKYSFCLWLAAHDRLATGARMIKW 645

Query: 789  GLIIDAHYSLCWAGRENEDHLFF 857
                    + C  G E  DHLFF
Sbjct: 646  NRGETGDCTFCRQGIETRDHLFF 668



 Score = 94.4 bits (233), Expect(2) = 5e-39
 Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFG-NLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           +W   F LP   I+ IE + SSFL  G NLN +K ++ SW  +CKP+SEGG+GLR +KE 
Sbjct: 377 FWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKI-SWNQVCKPKSEGGLGLRSLKEA 435

Query: 185 NMAGIIKLVWWIVSNKQCLWVKWVQTRFLKNDLSMVCERKSRL 313
           N    +KLVW I+S+   LWVKWV+   LK ++  + +  + L
Sbjct: 436 NDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENANL 478


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 92.0 bits (227), Expect(3) = 6e-37
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
 Frame = +3

Query: 282  SLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIP-- 452
            + WSVKE     SW+WRK++  R +A    +  + +     +W D W P G L Q +   
Sbjct: 1062 TFWSVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLHQHMGSR 1121

Query: 453  ---DLMRRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKFPNSHEDKILWTT--- 614
               DL   N++   E                L++ ++ I +  +  ++  D+ LW     
Sbjct: 1122 GTIDLGIPNNATVAEVMNTHRRKRHRADF--LNQIKSQIELARQDRSTDGDRSLWKQKED 1179

Query: 615  TPSGVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGL 794
            T    FS+   W  IR    +  W   VWF    P+++FV W  FH +L T+ ++ +   
Sbjct: 1180 TFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWN- 1238

Query: 795  IIDAHYSLCWAGRENE--DHLFFYCPLTNFVWQSVVRNFSLHYRKGRNW 935
               A Y   + G E E  DHLFF CP ++ VW S+ +   L+ R   NW
Sbjct: 1239 -SGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLTKGL-LNGRNILNW 1285



 Score = 86.3 bits (212), Expect(3) = 6e-37
 Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFG-NLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
            +W  VF LP   ++ IE MFS+FL  G +LN +K ++ +W  +CK + EGG+GL+ +KE 
Sbjct: 971  FWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKI-AWSEVCKLKEEGGLGLKPLKEA 1029

Query: 185  NMAGIIKLVWWIVSNKQCLWVKWVQTRFLKND 280
            N   ++KL+W I+S +  LWVKWV    ++ +
Sbjct: 1030 NEVSLLKLIWRILSARDSLWVKWVNKHLIRKE 1061



 Score = 25.4 bits (54), Expect(3) = 6e-37
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 997  VKLAFQGAIYHIWYERNKRK 1056
            ++ AFQ +I+ +W ERN R+
Sbjct: 1305 LRYAFQASIHSLWRERNCRR 1324


>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
          Length = 438

 Score =  100 bits (248), Expect(2) = 4e-35
 Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 10/230 (4%)
 Frame = +3

Query: 282 SLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLM 461
           + W +KE    SW WR ++  R  A   +   IGN  +  +W D W P G L+  I    
Sbjct: 181 NFWLIKEGTTDSWNWRCLLRLRPLASKFLFCSIGNGLTASFWADSWTPFGPLLTFIGSDG 240

Query: 462 RRNSSVD----IEXXXXXXXXXXXXPRSP----LHRFQNDISILEKFPNSHEDKILWTTT 617
            RN  +     +             PRS     LH F   +SI        ED  LW   
Sbjct: 241 PRNQRIPLCSKVADVVNGNRWLLPSPRSSNALNLHAFLTTLSI--PLQPLVEDSYLWKVE 298

Query: 618 PSGV--FSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLG 791
                 FS+   WN +R K+ +  WV++VWFK   P++AF +W    ++L T  R+   G
Sbjct: 299 NCSDIGFSSAHTWNALRHKEVEKPWVSSVWFKGVTPKNAFNMWITHQDRLRTKLRMIAWG 358

Query: 792 LIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVRNFSLHYRKGRNWKK 941
            ++    +LC  G E  DHL   C  +  VW  V +         +NW +
Sbjct: 359 FLVSPVCALCQVGFETRDHLMLSCDFSVSVWALVRQRIGTPLTIFQNWSE 408



 Score = 77.0 bits (188), Expect(2) = 4e-35
 Identities = 33/83 (39%), Positives = 50/83 (60%)
 Frame = +2

Query: 5   LYWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           ++W   F LP   I+ IESM + FL  G  +      +SW ++C P++EGG+G+R+  E+
Sbjct: 87  VFWMSTFRLPKGCIREIESMCARFLWSGGTDEHHKAKVSWSTVCLPKAEGGLGVRKFTEW 146

Query: 185 NMAGIIKLVWWIVSNKQCLWVKW 253
           N A  +KL+W + SN   LWV W
Sbjct: 147 NTALNLKLIWLLFSNSGSLWVAW 169


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 87.0 bits (214), Expect(3) = 2e-34
 Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 12/222 (5%)
 Frame = +3

Query: 273  KMISLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLI 449
            K  S WS+       SW+WR+++  R+ A    K  + N  +  +W D W  +G LI   
Sbjct: 633  KKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPLI--- 689

Query: 450  PDLMRRNSSVDIEXXXXXXXXXXXXPRS-PLHRFQ--NDIS--ILEKFPNSH---EDKIL 605
             +L     ++D+              R    HR +  N+    +L+K+ + +   ED IL
Sbjct: 690  -NLTGARGAIDMGISRHMTLAEAWSRRRRKRHRVEILNEFEEILLQKYQHRNIELEDAIL 748

Query: 606  WTTTPS---GVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAAR 776
            W          FSTK  WN IR   ++ +W   VWF +  P+ +F  W     +L T  R
Sbjct: 749  WRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDR 808

Query: 777  LNRLGLIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVRN 902
            +             C +  E  DHLFF C  ++ +W S+ +N
Sbjct: 809  MMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKN 850



 Score = 78.2 bits (191), Expect(3) = 2e-34
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFG-NLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           +W   F LP + I  I  + S+ L  G  LN +K ++ SW+ ICKP+ EGG+GL+ ++E 
Sbjct: 545 FWMNAFRLPRECINEINRISSALLWSGPELNPKKAKV-SWDEICKPKKEGGLGLQSLREA 603

Query: 185 NMAGIIKLVWWIVSNKQCLWVKWVQTRFLKND 280
           N    +KL+W ++S +  LWVKW +   LK +
Sbjct: 604 NKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKE 635



 Score = 30.0 bits (66), Expect(3) = 2e-34
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 988  SLLVKLAFQGAIYHIWYERNKRKFQGQSRS 1077
            S L +  FQ +I+ IW ERN R+   +SRS
Sbjct: 877  SFLSRYTFQVSIHSIWRERNSRRHGEKSRS 906


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 96.7 bits (239), Expect(3) = 5e-34
 Identities = 60/213 (28%), Positives = 85/213 (39%), Gaps = 9/213 (4%)
 Frame = +3

Query: 282  SLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLM 461
            S W V       W W+ +++ R  A   +K  +GN  ++ +W D W   G LI+ + D+ 
Sbjct: 768  SFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVG 827

Query: 462  RRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKF-------PNSHEDKILWTTTP 620
             R   +                R PL R     SIL          P    D   W    
Sbjct: 828  SRPLRIPFSAKVADAIDGSGW-RLPLSRSLTADSILSHLASLPPPSPLMVSDSYSWCVDD 886

Query: 621  SGV--FSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGL 794
                 FS    W ++R ++    W  +VWFK  +P+HAF  W     +LPT  RL   GL
Sbjct: 887  VDCQGFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGL 946

Query: 795  IIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSV 893
            +  A   LC    E  DHL   C  ++ VW+ V
Sbjct: 947  VSSAECCLCSFDTETRDHLLLLCDFSSQVWRMV 979



 Score = 73.6 bits (179), Expect(3) = 5e-34
 Identities = 32/82 (39%), Positives = 47/82 (57%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
           +W   F LP   IK IES+ S FL  G+++ RK   +SW   C P+SEGG+G R   E+N
Sbjct: 677 FWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736

Query: 188 MAGIIKLVWWIVSNKQCLWVKW 253
              +++L+W +      LW +W
Sbjct: 737 KTLLLRLIWVLFDRDTSLWAQW 758



 Score = 23.5 bits (49), Expect(3) = 5e-34
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 988  SLLVKLAFQGAIYHIWYERN 1047
            SLL K+  Q  +Y++W +RN
Sbjct: 1009 SLLRKVVAQLVVYNLWRQRN 1028


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 96.7 bits (239), Expect(3) = 5e-34
 Identities = 60/213 (28%), Positives = 85/213 (39%), Gaps = 9/213 (4%)
 Frame = +3

Query: 282  SLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLM 461
            S W V       W W+ +++ R  A   +K  +GN  ++ +W D W   G LI+ + D+ 
Sbjct: 768  SFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVG 827

Query: 462  RRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKF-------PNSHEDKILWTTTP 620
             R   +                R PL R     SIL          P    D   W    
Sbjct: 828  SRPLRIPFSAKVADAIDGSGW-RLPLSRSLTADSILSHLASLPPPSPLMVSDSYSWCVDD 886

Query: 621  SGV--FSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGL 794
                 FS    W ++R ++    W  +VWFK  +P+HAF  W     +LPT  RL   GL
Sbjct: 887  VDCQGFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGL 946

Query: 795  IIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSV 893
            +  A   LC    E  DHL   C  ++ VW+ V
Sbjct: 947  VSSAECCLCSFDTETRDHLLLLCDFSSQVWRMV 979



 Score = 73.6 bits (179), Expect(3) = 5e-34
 Identities = 32/82 (39%), Positives = 47/82 (57%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
           +W   F LP   IK IES+ S FL  G+++ RK   +SW   C P+SEGG+G R   E+N
Sbjct: 677 FWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736

Query: 188 MAGIIKLVWWIVSNKQCLWVKW 253
              +++L+W +      LW +W
Sbjct: 737 KTLLLRLIWVLFDRDTSLWAQW 758



 Score = 23.5 bits (49), Expect(3) = 5e-34
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 988  SLLVKLAFQGAIYHIWYERN 1047
            SLL K+  Q  +Y++W +RN
Sbjct: 1009 SLLRKVVAQLVVYNLWRQRN 1028


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 88.6 bits (218), Expect(3) = 2e-33
 Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 13/225 (5%)
 Frame = +3

Query: 282 SLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDL 458
           S WS+       SW+W+K++  R  A   VK+ I N ++  +W D W   G LI    D+
Sbjct: 170 SFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLI----DV 225

Query: 459 MRRNSSVDIEXXXXXXXXXXXXPRSPL-HRFQNDISILEKFPN-------SHEDKILWTT 614
                 +D+                P  HR    + I +           S ED + W  
Sbjct: 226 TGHRGCIDMGITLHASVAEAVVNHRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWKG 285

Query: 615 TPS---GVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNR 785
                   F+TK  W   R  K KV+W   VWF +  P+++ + W     +L T  R+  
Sbjct: 286 NGDIFKPCFNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLS 345

Query: 786 LGLIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVRN-FSLHY 917
                D+   LC    E  DHLFF CP +  VW ++ R   S H+
Sbjct: 346 WNAGADSSCVLCHHLVETRDHLFFTCPYSAEVWSTLTRKLLSQHF 390



 Score = 79.3 bits (194), Expect(3) = 2e-33
 Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFG-NLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
           +W   F LPS  IK I+S+ SSFL  G  LN +K ++ +W  +C P+ EGG+G+R +KE 
Sbjct: 80  FWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKV-AWSDVCTPKDEGGLGIRSLKEA 138

Query: 185 NMAGIIKLVWWIVSNKQCLWVKWVQTRFLK 274
           N   ++KL+W ++S+   LWV+W++   L+
Sbjct: 139 NKVSLLKLIWRMLSSTS-LWVQWLRLYLLR 167



 Score = 23.5 bits (49), Expect(3) = 2e-33
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 985  ISLLVKLAFQGAIYHIWYERNKRK 1056
            +  L +  FQ  ++ +W ERN R+
Sbjct: 410  VPFLTRYTFQLTLHSLWKERNGRR 433


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  100 bits (248), Expect(2) = 3e-33
 Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 8/211 (3%)
 Frame = +3

Query: 273  KMISLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLI- 449
            K  S W+  EK   SW W+ ++  R  A   ++  +GN     +W D W P G LI+ + 
Sbjct: 803  KSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDASFWFDNWTPFGPLIKFLG 862

Query: 450  ---PDLMRRNSSVDIEXXXXXXXXXXXXPRSP----LHRFQNDISILEKFPNSHEDKILW 608
               P  +R + +  I             PRS     LH    +IS+     +      + 
Sbjct: 863  NEGPRDLRVHLNAKISDVCTSEGWSIADPRSDQALSLHTHLTNISMPSDAQDLDSYDWVV 922

Query: 609  TTTPSGVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRL 788
                   FS  + W+ +R   + V W   VWFK   P+HAF +W    ++LPT  RL   
Sbjct: 923  DNKVCQGFSAAATWSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASW 982

Query: 789  GLIIDAHYSLCWAGRENEDHLFFYCPLTNFV 881
            G+ ID    LC    E  DHLF  C   NF+
Sbjct: 983  GMQIDTTCGLCSLHPETRDHLFLSCDFANFL 1013



 Score = 70.9 bits (172), Expect(2) = 3e-33
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
           +W   F LP   IK IES+ S FL    ++ + +  ++W  +C P++EGGIGLRR    N
Sbjct: 714 FWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSN 773

Query: 188 MAGIIKLVWWIVSNKQCLWVKW 253
               ++++W + SN   LWV W
Sbjct: 774 RTLYLRMIWLLFSNSGSLWVAW 795


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 91.7 bits (226), Expect(3) = 7e-33
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 10/230 (4%)
 Frame = +3

Query: 279  ISLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLI--- 449
            ++ W+ +     SW+W+ ++  R  A   ++  +GN   + +W D W   G LI+ I   
Sbjct: 906  VNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAIGAS 965

Query: 450  -PDLMRRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKFP----NSHEDKILWTT 614
             P L   + S  +              R+      N  S L   P    +  ED   W  
Sbjct: 966  GPQLTGIHESAVVTEASSSTGWILPSARTRNASLANLRSTLLNSPAPSGDRGEDTYTWYI 1025

Query: 615  --TPSGVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRL 788
              + S  FS+K  W  +R + +   W   VW+K  IP++AF  W     +LP  AR    
Sbjct: 1026 EGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHW 1085

Query: 789  GLIIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVRNFSLHYRKGRNWK 938
                 +   +C    E  DHLF +C L + +WQ V+  F    +  R WK
Sbjct: 1086 STNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFG-RSQMFREWK 1134



 Score = 63.9 bits (154), Expect(3) = 7e-33
 Identities = 29/90 (32%), Positives = 50/90 (55%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
            +W   F LP   +K+IE M + FL   ++  R    +SW++ C P++EGG+GLR    +N
Sbjct: 816  FWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWN 875

Query: 188  MAGIIKLVWWIVSNKQCLWVKWVQTRFLKN 277
                ++L+W + + +  LWV W     L++
Sbjct: 876  KTLNLRLIWMLFARRDSLWVAWNHANRLRH 905



 Score = 34.3 bits (77), Expect(3) = 7e-33
 Identities = 24/48 (50%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +1

Query: 994  LVKLAFQGAIYHIWYERNKRKFQGQSRS---ILK-----IHDDILADI 1113
            L KLA Q AI+HIW ERN R     S S   I K     I D ILA I
Sbjct: 1151 LKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIRDSILARI 1198


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 87.8 bits (216), Expect(3) = 2e-32
 Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 10/222 (4%)
 Frame = +3

Query: 282 SLWSVKEKVDC-SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDL 458
           S WS+++     SW+WRK++ +R  A    +Y I N   + +W D W P G LI +    
Sbjct: 134 SFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPLIAISGTR 193

Query: 459 MRRNSSVDIEXXXXXXXXXXXXPRSPLHRFQNDISILE---KFPNSHEDKILWTTT---- 617
              +  +DI                  H  Q +  + E   K     ED +LW       
Sbjct: 194 GCIDMGIDIHATVAEALTHRRRRHRADHLNQMEAQLEELRTKGLVETEDVVLWKGKGGRF 253

Query: 618 -PSGVFSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGL 794
            PS  FSTK  W   R +K +  W   +WF +  P+++F+ W     +L T  R+     
Sbjct: 254 KPS--FSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNA 311

Query: 795 IIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVV-RNFSLHY 917
            ++     C    E  +HLFF C  +  VW  +  +  + HY
Sbjct: 312 GVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTRHY 353



 Score = 72.8 bits (177), Expect(3) = 2e-32
 Identities = 33/84 (39%), Positives = 51/84 (60%)
 Frame = +2

Query: 8   YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
           +W   F LP+  IK I+ + S+FL  G    RK   +SW  +C P+ EGG+GLR + E N
Sbjct: 44  FWMSAFRLPNACIKEIDGLCSAFLWSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEAN 103

Query: 188 MAGIIKLVWWIVSNKQCLWVKWVQ 259
               +KL+W ++S+   LWV+W++
Sbjct: 104 KVCCLKLIWRLLSSSS-LWVQWLR 126



 Score = 28.1 bits (61), Expect(3) = 2e-32
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 994  LVKLAFQGAIYHIWYERNKRK 1056
            L++ AFQ  +Y IW ERN R+
Sbjct: 376  LLRYAFQILVYSIWKERNSRR 396


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 84.3 bits (207), Expect(3) = 8e-31
 Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 9/229 (3%)
 Frame = +3

Query: 282  SLWSVKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDL- 458
            S W+V+     SW W++++  R  A   +   +GN     +W D W   G L ++I D+ 
Sbjct: 908  SFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSLGPLFRIIGDIG 967

Query: 459  ---MRRNSSVDIEXXXXXXXXXXXXPRS-PLHRFQNDISILEKFPNSHEDKILWTTTPSG 626
               +R      +              RS P     + +  +     + ED   +  + +G
Sbjct: 968  PSSLRVPLLAKVASAFSEDGWRLPVSRSAPAKGIHDHLCTVPVPSTAQEDVDRYEWSVNG 1027

Query: 627  V----FSTKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGL 794
                 FS    W  IR K +  SW +++WFK  +P++AF +W     +L T  RL   G 
Sbjct: 1028 FLCQGFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGH 1087

Query: 795  IIDAHYSLCWAGRENEDHLFFYCPLTNFVWQSVVRNFSLHYRKGRNWKK 941
            I      LC    E+ DHL   C  +  VW+ V R      R   +W +
Sbjct: 1088 IQSDACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSE 1136



 Score = 75.9 bits (185), Expect(3) = 8e-31
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
            +W   F LP   IK IES+ S FL  GN+   K   +SW ++C P+SEGG+GLRR+ E+N
Sbjct: 817  FWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWN 876

Query: 188  MAGIIKLVWWIVSNKQCLWVKW 253
                ++L+W +   K  LW  W
Sbjct: 877  KTLSMRLIWRLFVAKDSLWADW 898



 Score = 22.7 bits (47), Expect(3) = 8e-31
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 991  LLVKLAFQGAIYHIWYERN 1047
            LL K+  Q  +Y++W +RN
Sbjct: 1151 LLRKIVSQVVVYNLWRQRN 1169


>ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobroma cacao]
            gi|508710339|gb|EOY02236.1| Uncharacterized protein
            TCM_011923 [Theobroma cacao]
          Length = 1954

 Score = 79.7 bits (195), Expect(3) = 4e-29
 Identities = 55/213 (25%), Positives = 94/213 (44%)
 Frame = +3

Query: 294  VKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMRRNS 473
            V  K+  S VW++++  R+ A+   ++ IG   S+ +W D W  +  L+   P      S
Sbjct: 1483 VHPKLHDSQVWKRMVRGREVAIQNTRWRIGK-GSLFFWHDCWMGDQPLVTSFPHFRNDMS 1541

Query: 474  SVDIEXXXXXXXXXXXXPRSPLHRFQNDISILEKFPNSHEDKILWTTTPSGVFSTKSAWN 653
            +V                  P++     + I      S +D   W+ T +G FST+SAW 
Sbjct: 1542 TVHNFFNGHNWDVDKLNLYLPMNLVDEILQI--PIDRSQDDVAYWSLTSNGEFSTRSAWE 1599

Query: 654  LIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGLIIDAHYSLCWAGR 833
             IR +KS     + +W K+     +F +WR+FH  +P   RL   G  + A   +C    
Sbjct: 1600 AIRLRKSPNVLCSLLWHKSIPLSISFFLWRVFHNWIPVDIRLKEKGFHL-ASKCICCNSE 1658

Query: 834  ENEDHLFFYCPLTNFVWQSVVRNFSLHYRKGRN 932
            E+  H+ +  P+   VW     +F ++  K +N
Sbjct: 1659 ESLIHVLWDNPIAKQVWNFFANSFQIYISKPQN 1691



 Score = 57.4 bits (137), Expect(3) = 4e-29
 Identities = 30/88 (34%), Positives = 50/88 (56%)
 Frame = +2

Query: 5    LYWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEF 184
            LY   V   P   I+ IE +F+SFL   + N +++   +W  +  P SEGG+ +RR+ + 
Sbjct: 1388 LYLLQVLKPPVVVIEKIERLFNSFLWGDSTNDKRIHWAAWHKLTFPCSEGGLDIRRLTDM 1447

Query: 185  NMAGIIKLVWWIVSNKQCLWVKWVQTRF 268
              A  +KL WW  S  + LW K+++T++
Sbjct: 1448 FDAFSLKL-WWRFSTCEGLWTKFLKTKY 1474



 Score = 40.0 bits (92), Expect(3) = 4e-29
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
 Frame = +1

Query: 1024 YHIWYERNKRKFQGQSRSILKIHDDILADINACLPLNVP*IKNRWNSFIVDSWNLQVQWT 1203
            + +W ERN  K     R +    D ++  I   L       +   + +++ SW    QW 
Sbjct: 1721 WFLWLERNDAKH----RHLGMYSDRVVWKIMKLL-------RQLQDGYLLKSW----QWK 1765

Query: 1204 KKQMAFTHW--------KALP--LNWFC-------LNSDGSFDRAR-AGYGGVIRNEKGC 1329
              +   T W        +A P  L+W         LN DGS  + + A  GGV+R+  G 
Sbjct: 1766 GDKDFATMWGLFSPPKTRAAPQILHWVKPVPGEHKLNVDGSSRQNQTAAIGGVLRDHTGT 1825

Query: 1330 LVIAYASAYNPKSVIHSETKALLVGI*LLRQMRVSCANIQSDSAYLVGII 1479
            LV  ++    P + + +E +ALL G+ L ++  +    ++ D+   + +I
Sbjct: 1826 LVFDFSENIGPSNSLQAELRALLRGLLLCKERNIEKLWVEMDALVAIQMI 1875


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 79.7 bits (195), Expect(3) = 5e-28
 Identities = 37/90 (41%), Positives = 54/90 (60%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
            Y   V  LP  T   I+    +FL   + N RKL  ++W  ICKP++EGG+GLR  ++FN
Sbjct: 807  YTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 866

Query: 188  MAGIIKLVWWIVSNKQCLWVKWVQTRFLKN 277
             A + K+ W I SN   LWVK ++ +++KN
Sbjct: 867  RAFLTKMAWQIFSNIDKLWVKVLREKYVKN 896



 Score = 64.7 bits (156), Expect(3) = 5e-28
 Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 9/232 (3%)
 Frame = +3

Query: 294  VKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMRRNS 473
            ++ + +CSW WR +M  +      +K+ +GN   I +W D W  +G L     D + +  
Sbjct: 902  LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLAS-NTDCINQPH 960

Query: 474  SVDIEXXXXXXXXXXXXPRSPLHRF--QNDISILEKFP----NSHEDKILWTTTPSGVFS 635
              DI+                LH     N I ++   P    +  ED + W  + +G+ +
Sbjct: 961  MTDIK-VEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVT 1019

Query: 636  TKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGLIIDAHYS 815
              SA++LI          + +W      +    +W++    L       R GL   A   
Sbjct: 1020 VSSAYSLIAGHDGDDRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCP 1079

Query: 816  LCWAGRENEDHLFFYCPLTNFVWQSVVRNFSL---HYRKGRNWKKRSCIDTQ 962
            +C    E  DHLF  C L    W S V   +    ++    +W K +C   Q
Sbjct: 1080 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQ 1131



 Score = 28.9 bits (63), Expect(3) = 5e-28
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 5/164 (3%)
 Frame = +1

Query: 1003 LAFQGAIYHIWYERNKRKFQGQSRSILKIHDDILADINACLPLNVP*IKNRWNSFIVDSW 1182
            L F   ++++W  RN+  F                D N   P +   I NR      ++ 
Sbjct: 1141 LIFPYILWNLWKARNRLVF----------------DNNITAPSD---ILNRSFMESSEAR 1181

Query: 1183 NLQVQWTKKQMAFTHWKAL--PLNWFC-LNSDGSFDRAR--AGYGGVIRNEKGCLVIAYA 1347
             L  + T  Q AF  W     P   F  LNSDG+       A  GG++RNE G  V  Y 
Sbjct: 1182 CLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYT 1241

Query: 1348 SAYNPKSVIHSETKALLVGI*LLRQMRVSCANIQSDSAYLVGII 1479
                  +   +E   L  G+ L +    +    ++DS  +V ++
Sbjct: 1242 CNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 79.7 bits (195), Expect(3) = 7e-28
 Identities = 37/90 (41%), Positives = 54/90 (60%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
            Y   V  LP  T   I+    +FL   + N RKL  ++W  ICKP++EGG+GLR  ++FN
Sbjct: 807  YTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 866

Query: 188  MAGIIKLVWWIVSNKQCLWVKWVQTRFLKN 277
             A + K+ W I SN   LWVK ++ +++KN
Sbjct: 867  RAFLTKMAWQIFSNIDKLWVKVLREKYVKN 896



 Score = 64.7 bits (156), Expect(3) = 7e-28
 Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 9/232 (3%)
 Frame = +3

Query: 294  VKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMRRNS 473
            ++ + +CSW WR +M  +      +K+ +GN   I +W D W  +G L     D + +  
Sbjct: 902  LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLAS-NTDCINQPH 960

Query: 474  SVDIEXXXXXXXXXXXXPRSPLHRF--QNDISILEKFP----NSHEDKILWTTTPSGVFS 635
              DI+                LH     N I ++   P    +  ED + W  + +G+ +
Sbjct: 961  MTDIK-VEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVT 1019

Query: 636  TKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGLIIDAHYS 815
              SA++LI          + +W      +    +W++    L       R GL   A   
Sbjct: 1020 VSSAYSLIAGHDGDDRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCP 1079

Query: 816  LCWAGRENEDHLFFYCPLTNFVWQSVVRNFSL---HYRKGRNWKKRSCIDTQ 962
            +C    E  DHLF  C L    W S V   +    ++    +W K +C   Q
Sbjct: 1080 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQ 1131



 Score = 28.5 bits (62), Expect(3) = 7e-28
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 5/164 (3%)
 Frame = +1

Query: 1003 LAFQGAIYHIWYERNKRKFQGQSRSILKIHDDILADINACLPLNVP*IKNRWNSFIVDSW 1182
            L F   ++++W  RN+  F                D N   P +   I NR      ++ 
Sbjct: 1141 LIFPYILWNLWKARNRLVF----------------DNNITAPSD---ILNRSFMESSEAR 1181

Query: 1183 NLQVQWTKKQMAFTHWKAL--PLNWFC-LNSDGSFDRAR--AGYGGVIRNEKGCLVIAYA 1347
             L  + T  Q AF  W     P   F  LNSDG+       A  GG++RNE G  V  Y 
Sbjct: 1182 CLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYI 1241

Query: 1348 SAYNPKSVIHSETKALLVGI*LLRQMRVSCANIQSDSAYLVGII 1479
                  +   +E   L  G+ L +    +    ++DS  +V ++
Sbjct: 1242 CNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 79.7 bits (195), Expect(3) = 3e-27
 Identities = 37/90 (41%), Positives = 54/90 (60%)
 Frame = +2

Query: 8    YWSGVFGLPSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFN 187
            Y   V  LP  T   I+    +FL   + N RKL  ++W  ICKP++EGG+GLR  ++FN
Sbjct: 1339 YTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 1398

Query: 188  MAGIIKLVWWIVSNKQCLWVKWVQTRFLKN 277
             A + K+ W I SN   LWVK ++ +++KN
Sbjct: 1399 RAFLTKMAWQIFSNIDKLWVKVLREKYVKN 1428



 Score = 62.4 bits (150), Expect(3) = 3e-27
 Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 9/232 (3%)
 Frame = +3

Query: 294  VKEKVDCSWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMRRNS 473
            ++ + +CSW WR +M  +      +K+ +GN   I +W D W  +G L     D + +  
Sbjct: 1434 LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLAS-NTDCINQPH 1492

Query: 474  SVDIEXXXXXXXXXXXXPRSPLHRFQ--NDISILEKFP----NSHEDKILWTTTPSGVFS 635
              DI+                LH     N I ++   P    +  ED   W  + +G+ +
Sbjct: 1493 MTDIK-VEDLTTSQRRWDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVT 1551

Query: 636  TKSAWNLIR*KKSKVSWVNNVWFKNYIPRHAFVVWRLFHEKLPTAARLNRLGLIIDAHYS 815
              SA++LI          + +W      +    +W++    L       R GL   A   
Sbjct: 1552 VSSAYSLIAGHDGDGRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCP 1611

Query: 816  LCWAGRENEDHLFFYCPLTNFVWQSVVRNFSL---HYRKGRNWKKRSCIDTQ 962
            +C    E  DHLF  C L    W S V   +    ++    +W K +C   Q
Sbjct: 1612 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQ 1663



 Score = 28.9 bits (63), Expect(3) = 3e-27
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 5/164 (3%)
 Frame = +1

Query: 1003 LAFQGAIYHIWYERNKRKFQGQSRSILKIHDDILADINACLPLNVP*IKNRWNSFIVDSW 1182
            L F   ++++W  RN+  F                D N   P +   I NR      ++ 
Sbjct: 1673 LIFPYILWNLWKARNRLVF----------------DNNITAPSD---ILNRSFMESSEAR 1713

Query: 1183 NLQVQWTKKQMAFTHWKAL--PLNWFC-LNSDGSFDRAR--AGYGGVIRNEKGCLVIAYA 1347
             L  + T  Q AF  W     P   F  LNSDG+       A  GG++RNE G  V  Y 
Sbjct: 1714 CLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYT 1773

Query: 1348 SAYNPKSVIHSETKALLVGI*LLRQMRVSCANIQSDSAYLVGII 1479
                  +   +E   L  G+ L +    +    ++DS  +V ++
Sbjct: 1774 CNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1817


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 775

 Score = 71.2 bits (173), Expect(3) = 3e-27
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
 Frame = +3

Query: 315 SWVWRKVMHFRQQAMYVVKYLIGNDNSIKWWLDPWHPEGLLIQLIPDLMR-RNSSVDIEX 491
           S  W+ ++  RQQ    +++ +   N   WW D W   G L Q   + +R  NS V    
Sbjct: 295 SLTWKHMLAIRQQVEQHIQWQLQAGNCSFWW-DNWMGTGPLAQHTCNNIRLNNSKVADFW 353

Query: 492 XXXXXXXXXXXPRSPLHRFQNDISILEKFPNSHEDKILWTTTPSGVFSTKSAWNLIR*KK 671
                       ++P  +  N ++I        +D+ +W     G FS  SAW  IR KK
Sbjct: 354 ENGVWNYRKLVEQAPASQLANIMAIAIPQQQYQQDQPVWKLHSQGKFSCHSAWEEIRNKK 413

Query: 672 SKVSWVNNVWFKNYIP-RHAFVVWRLFHEKLPTAARLNRLGLIIDAHY-SLCWAGRENED 845
           +K  +++ +W  N+IP + +F++WR+   K+PT  +L   G+     Y  +  AG ++ +
Sbjct: 414 AKNRFLSFLWH-NFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPSPCYCCVDRAGMDSIN 472

Query: 846 HLFFYCPLTNFVWQSVVRNF-------SLHYRKGRNWKKRSC 950
           H+F        VW+S            +L  R  + W  +SC
Sbjct: 473 HIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSC 514



 Score = 51.6 bits (122), Expect(3) = 3e-27
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
 Frame = +1

Query: 1024 YHIWYERNKRKFQGQSRSILKIHDDILADINACLPLNVP*IK--NRWNSFIVDSWNLQVQ 1197
            +++W  R   K+ G++ +I ++   +  D    +    P I+    W + I  S   +  
Sbjct: 531  WNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCKHD 590

Query: 1198 WTKKQMAFTHWKALPLNWFCLNSDGSF--DRARAGYGGVIRNEKGCLVIAYASAYNPKSV 1371
                Q+    W   P  W  +N+DGS   +    G GG+IRN++G LV+A+A++    S 
Sbjct: 591  TKVCQVV---WNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSN 647

Query: 1372 IHSETKALLVGI*LLRQMRVSCANI--QSDSAYLVGIINGK 1488
              +ET+A L+G  L+  + +   NI  + DS  +V  I+ K
Sbjct: 648  NKAETEAALIG--LVHALELGYRNIIMELDSQLIVQWISKK 686



 Score = 47.8 bits (112), Expect(3) = 3e-27
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +2

Query: 32  PSKTIKSIESMFSSFLMFGNLNVRKLRLLSWESICKPQSEGGIGLRRVKEFNMAGIIKLV 211
           P+  IK I+ + + F      N +K    SW+++  P  EGG+G+R + +   +   K  
Sbjct: 202 PNTIIKQIQMLIADFFWGWQNNSKKYHWSSWKNLSYPYEEGGVGMRNLNDVCKSFQFK-Q 260

Query: 212 WWIVSNKQCLWVKWVQTRF 268
           WW    KQ LW  +++ ++
Sbjct: 261 WWTFRTKQTLWGDFLRAKY 279