BLASTX nr result
ID: Sinomenium22_contig00021366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00021366
(345 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37206.3| unnamed protein product [Vitis vinifera] 127 1e-27
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
ref|XP_002528772.1| pentatricopeptide repeat-containing protein,... 114 1e-23
ref|XP_007039590.1| Pentatricopeptide (PPR) repeat-containing pr... 108 1e-21
ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
gb|EXC26722.1| hypothetical protein L484_023336 [Morus notabilis] 104 1e-20
ref|XP_006385606.1| pentatricopeptide repeat-containing family p... 104 1e-20
ref|XP_004511762.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_007208921.1| hypothetical protein PRUPE_ppa1027215mg, par... 103 2e-20
ref|XP_003611431.1| Pentatricopeptide repeat-containing protein ... 100 3e-19
ref|XP_006436813.1| hypothetical protein CICLE_v10030784mg [Citr... 100 4e-19
ref|XP_007156631.1| hypothetical protein PHAVU_002G004400g [Phas... 99 5e-19
ref|XP_006306842.1| hypothetical protein CARUB_v10008386mg [Caps... 99 5e-19
ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp.... 99 8e-19
ref|XP_006415198.1| hypothetical protein EUTSA_v10006886mg [Eutr... 97 2e-18
gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical ... 97 3e-18
ref|NP_564401.1| pentatricopeptide repeat-containing protein [Ar... 97 3e-18
ref|XP_006605795.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 127 bits (320), Expect = 1e-27
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
+A RA KR+LELDP NAPAHV+LCN++A+ GQR +EG LRKEM LKGV+KVPGCSWILLK
Sbjct: 574 VARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLK 633
Query: 188 AETHVFLSGDRSHPQTGEIFQLLSG 262
E +VFLSGDR HPQ E+ LL G
Sbjct: 634 GEPYVFLSGDRIHPQADEMLSLLFG 658
>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 127 bits (320), Expect = 1e-27
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
+A RA KR+LELDP NAPAHV+LCN++A+ GQR +EG LRKEM LKGV+KVPGCSWILLK
Sbjct: 653 VARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLK 712
Query: 188 AETHVFLSGDRSHPQTGEIFQLLSG 262
E +VFLSGDR HPQ E+ LL G
Sbjct: 713 GEPYVFLSGDRIHPQADEMLSLLFG 737
>ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531775|gb|EEF33594.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 676
Score = 114 bits (286), Expect = 1e-23
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
+IA RA R+LELDP NAPAHVLLCN+YAA+GQ +E LRKEM LKGVKKVPGCSWI+L
Sbjct: 586 DIAKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWIVL 645
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
HVFLSGD+ Q ++ LL
Sbjct: 646 NGRVHVFLSGDKPRLQAKDMLSLL 669
>ref|XP_007039590.1| Pentatricopeptide (PPR) repeat-containing protein, putative
[Theobroma cacao] gi|508776835|gb|EOY24091.1|
Pentatricopeptide (PPR) repeat-containing protein,
putative [Theobroma cacao]
Length = 734
Score = 108 bits (269), Expect = 1e-21
Identities = 51/86 (59%), Positives = 62/86 (72%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
EIA A +++LELDP NAPAHV+LCN+YAA G E LRKEM L+GV+KVPGCSWI L
Sbjct: 644 EIAKHAAQKLLELDPLNAPAHVVLCNIYAARGLYLAEQKLRKEMGLRGVRKVPGCSWIQL 703
Query: 185 KAETHVFLSGDRSHPQTGEIFQLLSG 262
++F SGD+ HPQ E+ LL G
Sbjct: 704 NGRVYMFKSGDKLHPQADEVLSLLFG 729
>ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 687
Score = 107 bits (267), Expect = 2e-21
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
++A A K++LE+DP NAPAHV+LCN+Y+A G +E LR+EM LKGV+KVPGCSWIL+
Sbjct: 587 QVAKYAAKQLLEMDPLNAPAHVVLCNIYSANGLHIEEKALRREMGLKGVRKVPGCSWILV 646
Query: 185 KAETHVFLSGDRSHPQTGEIFQLLSG 262
+ +VFLSGD HP GE+ +L G
Sbjct: 647 QGRVNVFLSGDILHPDVGEMLLVLFG 672
>gb|EXC26722.1| hypothetical protein L484_023336 [Morus notabilis]
Length = 763
Score = 104 bits (260), Expect = 1e-20
Identities = 48/84 (57%), Positives = 63/84 (75%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
E+AS A +R+ EL+ NAPA+V+LCN+YAA Q +E MLRKEM L+G++KVPGCSWILL
Sbjct: 666 EVASHAAQRLFELESLNAPANVVLCNIYAANNQHVEEEMLRKEMRLRGMRKVPGCSWILL 725
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
HVFLSGD+ P+ ++ LL
Sbjct: 726 SGRVHVFLSGDKVKPEVDDMLLLL 749
>ref|XP_006385606.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342735|gb|ERP63403.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 744
Score = 104 bits (260), Expect = 1e-20
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
+IA A +R+LELDP NAPAHV LCN+YAA G+ +E LRKEM LKGV+KVPGCSWI+L
Sbjct: 655 DIAQHAARRLLELDPLNAPAHVALCNIYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIVL 714
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
VFLSGD+ P+ E+ L
Sbjct: 715 NGNVCVFLSGDKLDPEADEMLLFL 738
>ref|XP_004511762.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Cicer arietinum]
Length = 741
Score = 103 bits (258), Expect = 2e-20
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
++A RA KR+LELDP NAP HV LCN+YAA + +E LR+EM +KGV+K PGCSWIL
Sbjct: 658 DVARRAAKRLLELDPLNAPGHVTLCNIYAANNRHIEETSLRREMRMKGVRKAPGCSWILE 717
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
K HVF SGDR PQ ++ L+
Sbjct: 718 KGSVHVFSSGDRLDPQGEDMLLLI 741
>ref|XP_007208921.1| hypothetical protein PRUPE_ppa1027215mg, partial [Prunus persica]
gi|462404656|gb|EMJ10120.1| hypothetical protein
PRUPE_ppa1027215mg, partial [Prunus persica]
Length = 626
Score = 103 bits (257), Expect = 2e-20
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
E+A A K++LELDP NAPAHV+LCN+YAA GQ +E +LR+EM LKGV+KVPGCSWI+L
Sbjct: 551 EVARYAAKQLLELDPLNAPAHVVLCNIYAANGQHIEEKLLRREMGLKGVRKVPGCSWIVL 610
Query: 185 KAETHVFLSGDR 220
+ +VFLSGD+
Sbjct: 611 QGRVNVFLSGDK 622
>ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 735
Score = 100 bits (248), Expect = 3e-19
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
+IA RA R+LELDP NAP HV LCN+YAA + +E LR+EM +KGV+K PGCSWIL+
Sbjct: 652 DIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILV 711
Query: 185 KAETHVFLSGDRSHPQTGEI 244
K + H F SGDR P E+
Sbjct: 712 KGKVHAFSSGDRLDPLAEEM 731
>ref|XP_006436813.1| hypothetical protein CICLE_v10030784mg [Citrus clementina]
gi|568863913|ref|XP_006485372.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568863915|ref|XP_006485373.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|557539009|gb|ESR50053.1| hypothetical protein
CICLE_v10030784mg [Citrus clementina]
Length = 752
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/80 (58%), Positives = 59/80 (73%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
EIA A KR+LELDP NAPAHV+LCN+YAA+G+ +E LR +M LKGV+KVPGCSW++
Sbjct: 671 EIAEHAAKRLLELDPLNAPAHVVLCNIYAASGRHVEEHKLRMDMGLKGVRKVPGCSWLMR 730
Query: 185 KAETHVFLSGDRSHPQTGEI 244
+FLSGD+ Q EI
Sbjct: 731 NGGIQMFLSGDKIPAQVAEI 750
>ref|XP_007156631.1| hypothetical protein PHAVU_002G004400g [Phaseolus vulgaris]
gi|561030046|gb|ESW28625.1| hypothetical protein
PHAVU_002G004400g [Phaseolus vulgaris]
Length = 718
Score = 99.4 bits (246), Expect = 5e-19
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
++A+RA KR+ ELDP NAP HV LCN+YAA + +E LR+EM LKGVKK PGCSWIL+
Sbjct: 642 DVATRAAKRLFELDPLNAPGHVALCNIYAANDRHIEEMRLREEMRLKGVKKAPGCSWILV 701
Query: 185 KAETHVFLSGDRSH 226
K H+F S D+ H
Sbjct: 702 KGTVHIFFSDDKLH 715
>ref|XP_006306842.1| hypothetical protein CARUB_v10008386mg [Capsella rubella]
gi|482575553|gb|EOA39740.1| hypothetical protein
CARUB_v10008386mg [Capsella rubella]
Length = 759
Score = 99.4 bits (246), Expect = 5e-19
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +2
Query: 2 GEIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWIL 181
G IA RA R+LELDP NAP HV LCNVYA G+ E RKEM +KGVKK PGCSWI+
Sbjct: 657 GCIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHEMEKETRKEMGIKGVKKTPGCSWIV 716
Query: 182 LKAETHVFLSGDRSHPQTGEI 244
+ T+VFLSGD+S + ++
Sbjct: 717 VNGRTNVFLSGDKSASEASQM 737
>ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
IA RA R+LELDP NAP HV LCN+YA G+ E +RKEM +KGVKK PGCSW+++
Sbjct: 689 IAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMRKEMGIKGVKKTPGCSWVVVN 748
Query: 188 AETHVFLSGDRSHPQTGEI 244
+VFLSGD+S + G++
Sbjct: 749 GRANVFLSGDKSASEAGQM 767
>ref|XP_006415198.1| hypothetical protein EUTSA_v10006886mg [Eutrema salsugineum]
gi|557092969|gb|ESQ33551.1| hypothetical protein
EUTSA_v10006886mg [Eutrema salsugineum]
Length = 760
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
+A RA R+LELDP NAP HV LCNVYA G+ E +RKEM KGVKK PGCSWI+L
Sbjct: 656 VAERAATRLLELDPVNAPGHVALCNVYAGLGRHEMEKEMRKEMGFKGVKKTPGCSWIVLN 715
Query: 188 AETHVFLSGDRS 223
+VFLSGD+S
Sbjct: 716 GRANVFLSGDKS 727
>gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
IA RA R+LELDP NAP HV LCNVYA G+ E +RKEM +KGVKK PGCSW+++
Sbjct: 762 IAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 821
Query: 188 AETHVFLSGDRSHPQTGEI 244
+VFLSGD+S + ++
Sbjct: 822 GRANVFLSGDKSASEAAQM 840
>ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +2
Query: 8 IASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILLK 187
IA RA R+LELDP NAP HV LCNVYA G+ E +RKEM +KGVKK PGCSW+++
Sbjct: 659 IAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 718
Query: 188 AETHVFLSGDRSHPQTGEI 244
+VFLSGD+S + ++
Sbjct: 719 GRANVFLSGDKSASEAAQM 737
>ref|XP_006605795.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like isoform X1 [Glycine max]
Length = 766
Score = 95.9 bits (237), Expect = 5e-18
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
++A RA KR+ EL+P NAP HV LCN+YAA + ++ LRKEM +KGV+K PGCSWIL+
Sbjct: 690 DVARRAAKRLFELEPLNAPGHVALCNIYAANDRHIEDTSLRKEMRMKGVRKAPGCSWILV 749
Query: 185 KAETHVFLSGDRSHPQ 232
+ H+F S ++ HP+
Sbjct: 750 RGTVHIFFSDNKLHPR 765
>ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Solanum lycopersicum]
Length = 858
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/84 (47%), Positives = 59/84 (70%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
E+A +A K +LELDP ++ +H+LL N+YAA G ++ +RK M G+KK PGCSWI +
Sbjct: 746 EVAEKAAKCLLELDPEDSSSHILLSNIYAAAGMWKEVSEMRKVMRYGGLKKEPGCSWIEI 805
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
K+ H+FL GD++HP+ EI+ L
Sbjct: 806 KSVLHMFLVGDKAHPRCNEIYDNL 829
>ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
[Solanum tuberosum]
Length = 894
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +2
Query: 5 EIASRAGKRVLELDPNNAPAHVLLCNVYAATGQRRKEGMLRKEMELKGVKKVPGCSWILL 184
E+A +A K +LELDP ++ +H+LL N+YA G ++ +RK M G+KK PGCSWI +
Sbjct: 770 EVAEKAAKCLLELDPEDSSSHILLSNIYADAGMWKEVAEMRKAMRYGGLKKEPGCSWIEI 829
Query: 185 KAETHVFLSGDRSHPQTGEIFQLL 256
K+ H+FL GD++HP+ EI++ L
Sbjct: 830 KSVLHMFLVGDKAHPRCNEIYENL 853