BLASTX nr result
ID: Sinomenium22_contig00021336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00021336
(263 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHM26641.1| a-b binding protein [Pyrus x bretschneideri] 60 4e-07
sp|Q9SQL2.1|CB24_PEA RecName: Full=Chlorophyll a-b binding prote... 60 4e-07
pdb|2WSC|4 Chain 4, Improved Model Of Plant Photosystem I gi|268... 60 4e-07
gb|ABN49455.1| photosystem I chlorophyll a/b binding protein [Pi... 60 4e-07
emb|CAE30280.1| chlorophyll a /b binding protein [Beta vulgaris] 59 9e-07
ref|XP_007209497.1| hypothetical protein PRUPE_ppa010291mg [Prun... 59 9e-07
emb|CBI15210.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4... 59 9e-07
gb|AAP69815.1| chlorophyll a/b-binding protein, partial [Vitis v... 59 9e-07
ref|XP_004138171.1| PREDICTED: chlorophyll a-b binding protein P... 58 1e-06
gb|AFK37078.1| unknown [Lotus japonicus] 58 1e-06
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK... 58 1e-06
ref|XP_004513901.1| PREDICTED: chlorophyll a-b binding protein P... 58 2e-06
gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays] 58 2e-06
gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays] 58 2e-06
gb|ACF84895.1| unknown [Zea mays] 58 2e-06
gb|ABX71549.1| chloroplast chlorophyll a/b binding protein [Heli... 57 2e-06
emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 ... 57 3e-06
emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting... 57 3e-06
emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting... 57 3e-06
>gb|AHM26641.1| a-b binding protein [Pyrus x bretschneideri]
Length = 253
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGGF 180
TGKGPFDNLLQHLSDPW NTIVQTL GF
Sbjct: 226 TGKGPFDNLLQHLSDPWHNTIVQTLRGF 253
>sp|Q9SQL2.1|CB24_PEA RecName: Full=Chlorophyll a-b binding protein P4, chloroplastic;
AltName: Full=LHCI type III CAB-P4; Flags: Precursor
gi|6470348|gb|AAF13731.1| PSI light-harvesting antenna
chlorophyll a/b-binding protein [Pisum sativum]
Length = 252
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQH+SDPW NTIVQTLGG
Sbjct: 225 TGKGPFDNLLQHISDPWHNTIVQTLGG 251
>pdb|2WSC|4 Chain 4, Improved Model Of Plant Photosystem I
gi|268612179|pdb|2WSE|4 Chain 4, Improved Model Of Plant
Photosystem I gi|268612197|pdb|2WSF|4 Chain 4, Improved
Model Of Plant Photosystem I
Length = 251
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQH+SDPW NTIVQTLGG
Sbjct: 224 TGKGPFDNLLQHISDPWHNTIVQTLGG 250
>gb|ABN49455.1| photosystem I chlorophyll a/b binding protein [Pisum sativum]
Length = 144
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQH+SDPW NTIVQTLGG
Sbjct: 117 TGKGPFDNLLQHISDPWHNTIVQTLGG 143
>emb|CAE30280.1| chlorophyll a /b binding protein [Beta vulgaris]
Length = 252
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QT GG
Sbjct: 225 TGKGPFDNLLQHLSDPWHNTIIQTFGG 251
>ref|XP_007209497.1| hypothetical protein PRUPE_ppa010291mg [Prunus persica]
gi|462405232|gb|EMJ10696.1| hypothetical protein
PRUPE_ppa010291mg [Prunus persica]
Length = 255
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGGF 180
TGKGPFDNLLQHLSDPW NTIVQTL G+
Sbjct: 228 TGKGPFDNLLQHLSDPWHNTIVQTLRGY 255
>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGGF 180
TGKGPFDNLLQH+SDPW NTI+QTL GF
Sbjct: 222 TGKGPFDNLLQHISDPWHNTIIQTLRGF 249
>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera] gi|147843386|emb|CAN79984.1| hypothetical
protein VITISV_038035 [Vitis vinifera]
Length = 252
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGGF 180
TGKGPFDNLLQH+SDPW NTI+QTL GF
Sbjct: 225 TGKGPFDNLLQHISDPWHNTIIQTLRGF 252
>gb|AAP69815.1| chlorophyll a/b-binding protein, partial [Vitis vinifera]
Length = 96
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGGF 180
TGKGPFDNLLQH+SDPW NTI+QTL GF
Sbjct: 69 TGKGPFDNLLQHISDPWHNTIIQTLRGF 96
>ref|XP_004138171.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Cucumis sativus] gi|449477217|ref|XP_004154963.1|
PREDICTED: chlorophyll a-b binding protein P4,
chloroplastic-like [Cucumis sativus]
Length = 252
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQH+SDPW NTIVQT GG
Sbjct: 225 TGKGPFDNLLQHISDPWHNTIVQTFGG 251
>gb|AFK37078.1| unknown [Lotus japonicus]
Length = 252
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTIVQTL G
Sbjct: 225 TGKGPFDNLLQHLSDPWHNTIVQTLSG 251
>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
[Medicago truncatula]
Length = 253
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTIVQTL G
Sbjct: 225 TGKGPFDNLLQHLSDPWHNTIVQTLSG 251
>ref|XP_004513901.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Cicer arietinum]
Length = 252
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 225 TGKGPFDNLLQHLSDPWHNTIIQTLSG 251
>gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 244
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 218 TGKGPFDNLLQHLSDPWHNTIIQTLSG 244
>gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 252
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 226 TGKGPFDNLLQHLSDPWHNTIIQTLSG 252
>gb|ACF84895.1| unknown [Zea mays]
Length = 149
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 123 TGKGPFDNLLQHLSDPWHNTIIQTLSG 149
>gb|ABX71549.1| chloroplast chlorophyll a/b binding protein [Helianthus annuus]
gi|161376576|gb|ABX71550.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376578|gb|ABX71551.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376580|gb|ABX71552.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376582|gb|ABX71553.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376584|gb|ABX71554.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376586|gb|ABX71555.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376588|gb|ABX71556.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376590|gb|ABX71557.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376592|gb|ABX71558.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376594|gb|ABX71559.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376596|gb|ABX71560.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376598|gb|ABX71561.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376600|gb|ABX71562.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376602|gb|ABX71563.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376604|gb|ABX71564.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376606|gb|ABX71565.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376608|gb|ABX71566.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
gi|161376610|gb|ABX71567.1| chloroplast chlorophyll a/b
binding protein [Helianthus annuus]
Length = 135
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTIVQT+ G
Sbjct: 108 TGKGPFDNLLQHLSDPWHNTIVQTMSG 134
>emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 [Pinus pinaster]
Length = 251
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 224 TGKGPFDNLLQHLSDPWHNTIIQTLQG 250
>emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
photosystem I [Pinus sylvestris]
Length = 251
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 224 TGKGPFDNLLQHLSDPWHNTIIQTLQG 250
>emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
photosystem I [Pinus sylvestris]
Length = 244
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 263 TGKGPFDNLLQHLSDPWRNTIVQTLGG 183
TGKGPFDNLLQHLSDPW NTI+QTL G
Sbjct: 217 TGKGPFDNLLQHLSDPWHNTIIQTLQG 243