BLASTX nr result
ID: Sinomenium22_contig00020811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020811
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849523.1| hypothetical protein AMTR_s00024p00151000 [A... 46 6e-09
ref|XP_004301231.1| PREDICTED: DNA polymerase epsilon subunit 2-... 44 2e-07
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [... 40 5e-07
ref|XP_002318325.2| DNA polymerase epsilon subunit B family prot... 40 3e-06
gb|EXB80266.1| DNA polymerase epsilon subunit 2 [Morus notabilis] 43 5e-06
ref|XP_002993816.1| hypothetical protein SELMODRAFT_236823 [Sela... 42 5e-06
ref|XP_002994634.1| hypothetical protein SELMODRAFT_236997 [Sela... 42 5e-06
ref|XP_002980170.1| hypothetical protein SELMODRAFT_111965 [Sela... 42 5e-06
>ref|XP_006849523.1| hypothetical protein AMTR_s00024p00151000 [Amborella trichopoda]
gi|548853098|gb|ERN11104.1| hypothetical protein
AMTR_s00024p00151000 [Amborella trichopoda]
Length = 492
Score = 45.8 bits (107), Expect(2) = 6e-09
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 220 AQTSALEKKAVNDMFVILSDIWVGNEEVIQCL 315
A+ LEKKAVNDMFVILSD+W+ NEE ++ L
Sbjct: 201 ARLVELEKKAVNDMFVILSDVWLDNEETMEKL 232
Score = 40.0 bits (92), Expect(2) = 6e-09
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VNACGIPPWRT-DESLAVLVGLDFFGGGSLLVEETVAFIRL 122
V+ CG PP + SLAV GLDFFG G L EET + L
Sbjct: 166 VHTCGFPPLEDGNASLAVHTGLDFFGAGYLTPEETARLVEL 206
>ref|XP_004301231.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Fragaria vesca
subsp. vesca]
Length = 527
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 235 LEKKAVNDMFVILSDIWVGNEEVIQCL 315
LEK+AVNDMFVILSDIW+ NEE + L
Sbjct: 271 LEKRAVNDMFVILSDIWLDNEEAMSKL 297
Score = 36.6 bits (83), Expect(2) = 2e-07
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VNACGIPPWRTDE-SLAVLVGLDFFGGGSLLVEETVAFIRL 122
V CG PP E S+ +L G DFFGGG L EET+ L
Sbjct: 231 VITCGFPPLEDREKSVKLLTGHDFFGGGILTKEETLRLTEL 271
>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
subunit B, putative [Ricinus communis]
Length = 536
Score = 39.7 bits (91), Expect(2) = 5e-07
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 VNACGIPPWRT-DESLAVLVGLDFFGGGSLLVEETVAFIRLPLFTTN 140
V CG PP D+SL VL DFFGGGSL EET+ L N
Sbjct: 245 VFTCGFPPLEDRDKSLKVLAKHDFFGGGSLTKEETLGLEELECKAVN 291
Score = 39.7 bits (91), Expect(2) = 5e-07
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 235 LEKKAVNDMFVILSDIWVGNEEVI 306
LE KAVNDMFVILSDIW+ +EE +
Sbjct: 285 LECKAVNDMFVILSDIWLDSEEAM 308
>ref|XP_002318325.2| DNA polymerase epsilon subunit B family protein [Populus
trichocarpa] gi|550326319|gb|EEE96545.2| DNA polymerase
epsilon subunit B family protein [Populus trichocarpa]
Length = 518
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 235 LEKKAVNDMFVILSDIWVGNEEVI 306
LEK+++NDMFVILSDIWV +EE +
Sbjct: 267 LEKRSLNDMFVILSDIWVDSEEAM 290
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VNACGIPPWRT-DESLAVLVGLDFFGGGSLLVEETVAFIRL 122
V CG PP D+SL L DFFGGG+L EET+ L
Sbjct: 227 VITCGFPPLEERDKSLKSLAQHDFFGGGTLTKEETLRLAEL 267
>gb|EXB80266.1| DNA polymerase epsilon subunit 2 [Morus notabilis]
Length = 543
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 235 LEKKAVNDMFVILSDIWVGNEEVI 306
LEKKAVNDMFVI+SD+W+ NEE +
Sbjct: 292 LEKKAVNDMFVIISDMWLDNEEAM 315
Score = 33.1 bits (74), Expect(2) = 5e-06
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 VNACGIPPWRTDE-SLAVLVGLDFFGGGSLLVEETVAFIRL 122
V CG PP E SL +L G DFFG L EET+ L
Sbjct: 252 VITCGFPPLEDREKSLKLLAGHDFFGSSVLTKEETLRLAEL 292
>ref|XP_002993816.1| hypothetical protein SELMODRAFT_236823 [Selaginella moellendorffii]
gi|300138336|gb|EFJ05108.1| hypothetical protein
SELMODRAFT_236823 [Selaginella moellendorffii]
Length = 523
Score = 41.6 bits (96), Expect(2) = 5e-06
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 217 IAQTSALEKKAVNDMFVILSDIWVGNEEVIQCL 315
I++ LE+KAVNDMFV++SD+W+ +E+ ++ L
Sbjct: 266 ISRLEVLERKAVNDMFVVISDVWLDDEQTMRNL 298
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 3 VNACGIPPWR-TDESLAVLVGLDFFGGGSLLVEE 101
++ CG PP + SL+V GLDFFG G+L +E
Sbjct: 232 ISTCGFPPLEGRNISLSVTAGLDFFGAGALSYDE 265
>ref|XP_002994634.1| hypothetical protein SELMODRAFT_236997 [Selaginella moellendorffii]
gi|300137271|gb|EFJ04303.1| hypothetical protein
SELMODRAFT_236997 [Selaginella moellendorffii]
Length = 523
Score = 41.6 bits (96), Expect(2) = 5e-06
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 217 IAQTSALEKKAVNDMFVILSDIWVGNEEVIQCL 315
I++ LE+KAVNDMFV++SD+W+ +E+ ++ L
Sbjct: 266 ISRLEVLERKAVNDMFVVISDVWLDDEQTMRNL 298
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 3 VNACGIPPWR-TDESLAVLVGLDFFGGGSLLVEE 101
++ CG PP + SL+V GLDFFG G+L +E
Sbjct: 232 ISTCGFPPLEGRNISLSVTAGLDFFGAGALSYDE 265
>ref|XP_002980170.1| hypothetical protein SELMODRAFT_111965 [Selaginella moellendorffii]
gi|300152397|gb|EFJ19040.1| hypothetical protein
SELMODRAFT_111965 [Selaginella moellendorffii]
Length = 484
Score = 41.6 bits (96), Expect(2) = 5e-06
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 217 IAQTSALEKKAVNDMFVILSDIWVGNEEVIQCL 315
I++ LE+KAVNDMFV++SD+W+ +E+ ++ L
Sbjct: 227 ISRLEVLERKAVNDMFVVISDVWLDDEQTMRNL 259
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 3 VNACGIPPWR-TDESLAVLVGLDFFGGGSLLVEE 101
++ CG PP + SL+V GLDFFG G+L +E
Sbjct: 193 ISTCGFPPLEGRNISLSVTAGLDFFGAGALSYDE 226