BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00020758
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296842.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09
ref|XP_007035595.1| Pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_004296842.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Fragaria vesca subsp. vesca]
          Length = 896

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -1

Query: 254 LLKKQGIFPSH-PKFCCIYNIYKECSSFHNGSSSELLGKANPIIDGTKQVDLGKKDHVKP 78
           LL+ QGI   H   FC IYN  K  SS  NG+SS + GK    + G    + GK + V+ 
Sbjct: 2   LLRNQGI--RHLDGFCSIYNFSKRFSSLPNGTSSGVDGKVGSSVGGVNHDNSGKVEGVRQ 59

Query: 77  SVDDVCRILNSGPWQTALESTLSSL 3
            VD VC++L  GPW  ALE+ LS+L
Sbjct: 60  VVDVVCQVLEGGPWGPALENALSAL 84


>ref|XP_007035595.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508714624|gb|EOY06521.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 901

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -1

Query: 263 MKGLLKKQGIFPSHPKFCC-IYNIYKECSSFHNGSSSELLGKANPIIDGTK-QVDLGKKD 90
           MK +L+  GI       CC  +NI K  SSF +G SSEL  K+ P +  +  Q +  + +
Sbjct: 1   MKMILRNPGITLCIRTKCCQSFNISKNLSSFSDGPSSELYKKSVPFVGKSSIQENPSRIE 60

Query: 89  HVKPSVDDVCRILNSGPWQTALESTLSSL 3
            V+  VDDVC +L SGPW  ALE  LS L
Sbjct: 61  GVRKEVDDVCCVLESGPWGPALEHALSLL 89


>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = -1

Query: 236 IFPSHPKFCCIYNIYKECSSFHNGSSSELLGKANPIIDGTKQVDLGKKDHVKPSVDDVCR 57
           IF S PK C I +I K+ SS  NG S E+ GK     DG  +      + ++  VDDVC 
Sbjct: 10  IFRSFPKGCYISSICKKFSSSCNGPS-EVDGKVVFSADGVDKKIPRNNEGIRKGVDDVCC 68

Query: 56  ILNSGPWQTALESTLSSL 3
           IL SGPW   LE++LS+L
Sbjct: 69  ILESGPWGPTLENSLSAL 86