BLASTX nr result
ID: Sinomenium22_contig00020688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020688
(294 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15850.3| unnamed protein product [Vitis vinifera] 71 1e-10
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 71 1e-10
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 71 1e-10
ref|XP_002881100.1| tRNA pseudouridine synthase family protein [... 70 4e-10
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops... 69 9e-10
gb|EXC11333.1| Putative tRNA pseudouridine synthase [Morus notab... 67 3e-09
ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutr... 67 3e-09
ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Caps... 67 3e-09
ref|XP_007017040.1| Pseudouridine synthase family protein [Theob... 66 6e-09
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ... 65 8e-09
ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prun... 64 2e-08
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 64 3e-08
ref|XP_006431979.1| hypothetical protein CICLE_v100038301mg, par... 64 3e-08
ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phas... 63 4e-08
gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus... 62 8e-08
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth... 62 8e-08
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 62 8e-08
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth... 62 1e-07
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth... 61 1e-07
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 61 1e-07
>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 MAAFALRLQFVPW--SKSPNRFHFSISKFVRFXXXXXXXXQVPDLPES-PDLSVDVIGDK 191
M +LR PW S + FS + + + ES PD SV K
Sbjct: 1 MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPDQSVQ----K 56
Query: 192 WKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
W+SFRKKKVVMRVGYVGT+YRGLQ+QR+E+SLST
Sbjct: 57 WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLST 90
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
vinifera]
Length = 564
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 MAAFALRLQFVPW--SKSPNRFHFSISKFVRFXXXXXXXXQVPDLPES-PDLSVDVIGDK 191
M +LR PW S + FS + + + ES PD SV K
Sbjct: 1 MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPDQSVQ----K 56
Query: 192 WKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
W+SFRKKKVVMRVGYVGT+YRGLQ+QR+E+SLST
Sbjct: 57 WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLST 90
>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
Length = 602
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 MAAFALRLQFVPW--SKSPNRFHFSISKFVRFXXXXXXXXQVPDLPES-PDLSVDVIGDK 191
M +LR PW S + FS + + + ES PD SV K
Sbjct: 1 MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPDQSVQ----K 56
Query: 192 WKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
W+SFRKKKVVMRVGYVGT+YRGLQ+QR+E+SLST
Sbjct: 57 WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLST 90
>ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297326939|gb|EFH57359.1| tRNA
pseudouridine synthase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 507
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +3
Query: 156 SPDLSVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
SP S + + DKW+S+RKKKVV+R+GYVGTDYRGLQIQR++ SL T
Sbjct: 45 SPSSSDNFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSLKT 90
>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
tRNA pseudouridine synthase; AltName: Full=tRNA
pseudouridylate synthase; AltName: Full=tRNA-uridine
isomerase gi|2347206|gb|AAC16945.1| putative
pseudouridine synthase [Arabidopsis thaliana]
gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
synthase [Arabidopsis thaliana]
Length = 510
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +3
Query: 156 SPDLSVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
SP S + + DKW+S+RKKKVV+R+GYVGTDYRGLQIQR++ S+ T
Sbjct: 45 SPPSSDNFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKT 90
>gb|EXC11333.1| Putative tRNA pseudouridine synthase [Morus notabilis]
Length = 481
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
+KW+ FRKKKVVMRVGYVGTDYRGLQ+QR+E+SLST
Sbjct: 56 NKWEPFRKKKVVMRVGYVGTDYRGLQMQRDEHSLST 91
>ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutrema salsugineum]
gi|557111301|gb|ESQ51585.1| hypothetical protein
EUTSA_v10016529mg [Eutrema salsugineum]
Length = 512
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/75 (45%), Positives = 44/75 (58%)
Frame = +3
Query: 69 PNRFHFSISKFVRFXXXXXXXXQVPDLPESPDLSVDVIGDKWKSFRKKKVVMRVGYVGTD 248
P R VRF P + S ++ DKW+S+RKKKVV+R+GYVGTD
Sbjct: 18 PTRIIRVTPALVRFSSSAAFQQSTSLSPSPSNNSGQLLADKWESYRKKKVVIRIGYVGTD 77
Query: 249 YRGLQIQREENSLST 293
YRGLQIQR++ +L T
Sbjct: 78 YRGLQIQRDDPALKT 92
>ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Capsella rubella]
gi|482562748|gb|EOA26938.1| hypothetical protein
CARUB_v10023036mg [Capsella rubella]
Length = 508
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3
Query: 156 SPDLSVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
SP S + DKW+S+RKKKVV+R+GYVGTDYRGLQIQR++ ++ T
Sbjct: 46 SPSSSDHFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPAIKT 91
>ref|XP_007017040.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508787403|gb|EOY34659.1| Pseudouridine synthase
family protein [Theobroma cacao]
Length = 507
Score = 65.9 bits (159), Expect = 6e-09
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +3
Query: 21 MAAFALRLQFVPW---SKSPNRFHFSISKF-VRFXXXXXXXXQVPDLPESPDLSVDVIGD 188
MA LR PW +++P + +RF +P P SP
Sbjct: 1 MAISCLRAPLAPWLMKTRNPPPLKLPCPRIQLRFLCSSSTAQPLP--PASP--------- 49
Query: 189 KWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
KW+ FRKKKVVMRVGYVGT+YRGLQ+QR+E+ LST
Sbjct: 50 KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLST 84
>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 377
Score = 65.5 bits (158), Expect = 8e-09
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +3
Query: 138 VPDLPE--SPDLSVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
+P LP S ++ KW+ FRKKKVV+RVGYVGTDYRGLQ Q +E+SLST
Sbjct: 28 IPILPSRLSSQSHAHILSQKWEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLST 81
>ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
gi|462403018|gb|EMJ08575.1| hypothetical protein
PRUPE_ppa004352mg [Prunus persica]
Length = 515
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/36 (77%), Positives = 35/36 (97%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
+KW+S RKKKVV+RVGYVG+DYRGLQ+QR+E+SLST
Sbjct: 54 EKWQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLST 89
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
DKW+ RKKKV +RVGYVGTDYRGLQ+QR+E+SLST
Sbjct: 70 DKWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLST 105
>ref|XP_006431979.1| hypothetical protein CICLE_v100038301mg, partial [Citrus
clementina] gi|557534101|gb|ESR45219.1| hypothetical
protein CICLE_v100038301mg, partial [Citrus clementina]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
DKW+ RKKKV +RVGYVGTDYRGLQ+QR+E+SLST
Sbjct: 70 DKWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLST 105
>ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
gi|561015205|gb|ESW14066.1| hypothetical protein
PHAVU_008G250200g [Phaseolus vulgaris]
Length = 512
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3
Query: 168 SVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
S+ +KW+ F KKKVVMRVGYVGTD+RGLQIQR+E++LST
Sbjct: 56 SLPTPSNKWEPFLKKKVVMRVGYVGTDFRGLQIQRDEHTLST 97
>gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus guttatus]
Length = 506
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
DKW+ FRKKKVVMRVGYVG+DY+GLQIQR++ ST
Sbjct: 57 DKWEPFRKKKVVMRVGYVGSDYKGLQIQRDQPEFST 92
>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Citrus sinensis] gi|568827612|ref|XP_006468145.1|
PREDICTED: putative tRNA pseudouridine synthase-like
isoform X2 [Citrus sinensis]
gi|568827614|ref|XP_006468146.1| PREDICTED: putative
tRNA pseudouridine synthase-like isoform X3 [Citrus
sinensis]
Length = 605
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
DKW+ RKKKV +RVGYVGTDYRGLQ+QR+E+SLS+
Sbjct: 70 DKWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLSS 105
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Solanum tuberosum]
Length = 487
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3
Query: 162 DLSVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
DLSV +KW F KKKVVMRVGYVG+DYRGLQ+QR+E+ LST
Sbjct: 36 DLSVQ--SNKWDPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLST 77
>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
Length = 516
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 168 SVDVIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
S+ +KW+ F KKKVVMRVGYVGTD+RGLQ+QR+E+ LST
Sbjct: 61 SLPTPSEKWEPFLKKKVVMRVGYVGTDFRGLQMQRDEHRLST 102
>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria
vesca subsp. vesca]
Length = 509
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = +3
Query: 186 DKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
++W+S RK+KVV+RVGYVGTDYRGLQIQR++ S+ST
Sbjct: 52 ERWESVRKRKVVLRVGYVGTDYRGLQIQRDDPSIST 87
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 177 VIGDKWKSFRKKKVVMRVGYVGTDYRGLQIQREENSLST 293
V +KW+ F KKKVVMRVGYVG+DYRGLQ+QR+E+ LST
Sbjct: 35 VESNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLST 73