BLASTX nr result
ID: Sinomenium22_contig00020663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020663
(356 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313773.2| RNA recognition motif-containing family prot... 114 4e-28
ref|XP_007042088.1| RNA-binding family protein, putative [Theobr... 117 1e-24
ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isofo... 117 2e-24
ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isofo... 117 2e-24
ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isofo... 117 2e-24
ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citr... 117 2e-24
ref|XP_006423391.1| hypothetical protein CICLE_v10027768mg [Citr... 117 2e-24
emb|CBI38027.3| unnamed protein product [Vitis vinifera] 116 3e-24
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257... 116 3e-24
ref|XP_004308441.1| PREDICTED: uncharacterized protein LOC101294... 114 1e-23
ref|XP_004289653.1| PREDICTED: uncharacterized protein LOC101293... 110 2e-22
ref|XP_006594407.1| PREDICTED: RNA-binding protein 28-like isofo... 108 8e-22
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like isofo... 108 8e-22
ref|XP_004981396.1| PREDICTED: RNA-binding protein 28-like [Seta... 92 1e-21
ref|XP_006295579.1| hypothetical protein CARUB_v10024686mg [Caps... 108 1e-21
ref|XP_004230860.1| PREDICTED: uncharacterized protein LOC101263... 107 2e-21
gb|EYU31489.1| hypothetical protein MIMGU_mgv1a000779mg [Mimulus... 107 2e-21
ref|XP_006362045.1| PREDICTED: RNA-binding protein 28-like [Sola... 106 3e-21
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi... 106 3e-21
ref|XP_007200315.1| hypothetical protein PRUPE_ppa001214mg [Prun... 105 5e-21
>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550331582|gb|EEE87728.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 974
Score = 114 bits (284), Expect(2) = 4e-28
Identities = 57/79 (72%), Positives = 65/79 (82%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLN MA++V R K+ GTVCSVTYPLP EEL +GL +DGC+ ASAVLFTSVK AR+S
Sbjct: 192 LLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSS 251
Query: 154 VAMLHQQEIKGGRVWARQL 98
VAMLHQ+EIKGG VWARQL
Sbjct: 252 VAMLHQKEIKGGIVWARQL 270
Score = 36.6 bits (83), Expect(2) = 4e-28
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 93 AKVKEIEDMFSSAGLVWDVFNPHMAE 16
AK EI+ +F SAG VWDVF PH +E
Sbjct: 291 AKPNEIKGVFESAGCVWDVFVPHNSE 316
>ref|XP_007042088.1| RNA-binding family protein, putative [Theobroma cacao]
gi|508706023|gb|EOX97919.1| RNA-binding family protein,
putative [Theobroma cacao]
Length = 953
Score = 117 bits (294), Expect = 1e-24
Identities = 59/94 (62%), Positives = 76/94 (80%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLN +MA++V K++GTVC+VTYPLP EEL+ +GLA+DGC+M+ASAVLFTS+KSARA
Sbjct: 173 LLNNEMAEDVHRCAKESGTVCAVTYPLPKEELERHGLAQDGCKMDASAVLFTSIKSARAV 232
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VAMLHQ+EI+GG VWARQL G + ++ I R
Sbjct: 233 VAMLHQKEIQGGIVWARQLGGEGSKTQKWKIIIR 266
>ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isoform X4 [Citrus sinensis]
Length = 819
Score = 117 bits (292), Expect = 2e-24
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+EV GTVCSVTYPLP EEL+ +GLA++GC+M+ASAVL+T+VKSA AS
Sbjct: 58 LLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 117
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA+LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 118 VALLHQKEIKGGTVWARQLGGEGSKTQKWKLIVR 151
>ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isoform X3 [Citrus sinensis]
Length = 933
Score = 117 bits (292), Expect = 2e-24
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+EV GTVCSVTYPLP EEL+ +GLA++GC+M+ASAVL+T+VKSA AS
Sbjct: 177 LLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 236
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA+LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 237 VALLHQKEIKGGTVWARQLGGEGSKTQKWKLIVR 270
>ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Citrus sinensis]
gi|568868077|ref|XP_006487345.1| PREDICTED: RNA-binding
protein 28-like isoform X2 [Citrus sinensis]
Length = 938
Score = 117 bits (292), Expect = 2e-24
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+EV GTVCSVTYPLP EEL+ +GLA++GC+M+ASAVL+T+VKSA AS
Sbjct: 177 LLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 236
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA+LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 237 VALLHQKEIKGGTVWARQLGGEGSKTQKWKLIVR 270
>ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citrus clementina]
gi|557525326|gb|ESR36632.1| hypothetical protein
CICLE_v10027768mg [Citrus clementina]
Length = 933
Score = 117 bits (292), Expect = 2e-24
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+EV GTVCSVTYPLP EEL+ +GLA++GC+M+ASAVL+T+VKSA AS
Sbjct: 177 LLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 236
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA+LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 237 VALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIR 270
>ref|XP_006423391.1| hypothetical protein CICLE_v10027768mg [Citrus clementina]
gi|557525325|gb|ESR36631.1| hypothetical protein
CICLE_v10027768mg [Citrus clementina]
Length = 710
Score = 117 bits (292), Expect = 2e-24
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+EV GTVCSVTYPLP EEL+ +GLA++GC+M+ASAVL+T+VKSA AS
Sbjct: 177 LLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 236
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA+LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 237 VALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIR 270
>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
Length = 918
Score = 116 bits (291), Expect = 3e-24
Identities = 59/94 (62%), Positives = 75/94 (79%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+ V R ++ GTVCSVTYPLP EEL+ +GL++DGC+++ASAVL++SVK A AS
Sbjct: 175 LLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHAS 234
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VAMLHQ+EIKGG VWARQL G + ++ I R
Sbjct: 235 VAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVR 268
>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 116 bits (291), Expect = 3e-24
Identities = 59/94 (62%), Positives = 75/94 (79%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNADMA+ V R ++ GTVCSVTYPLP EEL+ +GL++DGC+++ASAVL++SVK A AS
Sbjct: 194 LLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHAS 253
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VAMLHQ+EIKGG VWARQL G + ++ I R
Sbjct: 254 VAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVR 287
>ref|XP_004308441.1| PREDICTED: uncharacterized protein LOC101294023 [Fragaria vesca
subsp. vesca]
Length = 1035
Score = 114 bits (286), Expect = 1e-23
Identities = 57/94 (60%), Positives = 72/94 (76%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNA MA+EV + ++ G VCS+TYP P EE+ +GL +DGC+M+ASAVL+TSVKSA AS
Sbjct: 211 LLNAGMAEEVHRQAREVGDVCSITYPFPKEEVQQHGLVQDGCKMDASAVLYTSVKSAHAS 270
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VAMLHQ+EIKGG VWARQL G + ++ I R
Sbjct: 271 VAMLHQKEIKGGIVWARQLGGEGSKTRKWKLIVR 304
>ref|XP_004289653.1| PREDICTED: uncharacterized protein LOC101293353 [Fragaria vesca
subsp. vesca]
Length = 1023
Score = 110 bits (275), Expect = 2e-22
Identities = 55/94 (58%), Positives = 70/94 (74%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LLNA MA++V + ++ G VCS+TYP P EE+ +GL DGC+M+ASAVL+ SVKSA AS
Sbjct: 212 LLNAGMAEDVHRQAREVGDVCSITYPFPKEEVQQHGLVLDGCKMDASAVLYNSVKSAHAS 271
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VAMLHQ+EIKGG VWARQL G + ++ I R
Sbjct: 272 VAMLHQKEIKGGIVWARQLGGEGSKTRKWKLIIR 305
>ref|XP_006594407.1| PREDICTED: RNA-binding protein 28-like isoform X2 [Glycine max]
Length = 955
Score = 108 bits (270), Expect = 8e-22
Identities = 53/94 (56%), Positives = 73/94 (77%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
L+N+DMA+EV ++ K+ GTVCS+ YPL ++L+ +GL +DGC ++ASAVL+TSVKSARAS
Sbjct: 186 LINSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHGLLQDGCTLDASAVLYTSVKSARAS 245
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LH++EI GG VWARQL G + ++ I R
Sbjct: 246 VATLHKKEIGGGNVWARQLGGEGSKTQKWKLIIR 279
>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Glycine max]
Length = 956
Score = 108 bits (270), Expect = 8e-22
Identities = 53/94 (56%), Positives = 73/94 (77%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
L+N+DMA+EV ++ K+ GTVCS+ YPL ++L+ +GL +DGC ++ASAVL+TSVKSARAS
Sbjct: 187 LINSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHGLLQDGCTLDASAVLYTSVKSARAS 246
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LH++EI GG VWARQL G + ++ I R
Sbjct: 247 VATLHKKEIGGGNVWARQLGGEGSKTQKWKLIIR 280
>ref|XP_004981396.1| PREDICTED: RNA-binding protein 28-like [Setaria italica]
Length = 927
Score = 92.0 bits (227), Expect(2) = 1e-21
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = -2
Query: 319 MADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARASVAMLH 140
MA EV + + G V SV YPLP EE++L+GLARDGC +A+AVLF SVKSA SV LH
Sbjct: 199 MASEVFRQAGEIGPVVSVNYPLPKEEMELHGLARDGCTSDAAAVLFASVKSAWDSVVRLH 258
Query: 139 QQEIKGGRVWARQL 98
++E+KG VWARQL
Sbjct: 259 RKEVKGAIVWARQL 272
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 84 KEIEDMFSSAGLVWDVFNPHMAE 16
KEI DMFSSAG VWDV PH ++
Sbjct: 296 KEIMDMFSSAGFVWDVSIPHKSD 318
>ref|XP_006295579.1| hypothetical protein CARUB_v10024686mg [Capsella rubella]
gi|482564287|gb|EOA28477.1| hypothetical protein
CARUB_v10024686mg [Capsella rubella]
Length = 1006
Score = 108 bits (269), Expect = 1e-21
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
L+N +MA+ V RCK+ GTVCSV YPLP EEL GL +DGC+ EASAVLFTSVKSA A+
Sbjct: 243 LVNPEMAEVVHKRCKEIGTVCSVRYPLPREELQQNGLTQDGCRAEASAVLFTSVKSACAA 302
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LHQ E+KG +WARQL G + ++ I R
Sbjct: 303 VAKLHQTEMKGNLIWARQLGGEGSKAQKWKLIIR 336
>ref|XP_004230860.1| PREDICTED: uncharacterized protein LOC101263645 [Solanum
lycopersicum]
Length = 1599
Score = 107 bits (267), Expect = 2e-21
Identities = 52/94 (55%), Positives = 69/94 (73%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
++NA+MA E + GT+CS+TYPLP EE++ +GLA DGCQM+AS+VLFTSVKSA+A
Sbjct: 236 IVNANMAKEAHQLAAECGTICSITYPLPKEEIENHGLAHDGCQMDASSVLFTSVKSAQAC 295
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LHQ+E+ G +WARQL G + R+ I R
Sbjct: 296 VASLHQKEVHGATLWARQLGGEGSKTQRWKLILR 329
>gb|EYU31489.1| hypothetical protein MIMGU_mgv1a000779mg [Mimulus guttatus]
Length = 988
Score = 107 bits (266), Expect = 2e-21
Identities = 56/94 (59%), Positives = 69/94 (73%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
LL+ DMA+EV ++ GTV SVTYPLP EEL+ +GLA+DGC+M AS+VL+TSVKSAR
Sbjct: 178 LLSVDMAEEVHRLAREIGTVSSVTYPLPKEELEHHGLAQDGCKMTASSVLYTSVKSARQC 237
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
V LHQ+EI GG VWARQL G + R+ I R
Sbjct: 238 VEALHQKEIHGGSVWARQLGGEGSKTQRWKLIVR 271
>ref|XP_006362045.1| PREDICTED: RNA-binding protein 28-like [Solanum tuberosum]
Length = 1015
Score = 106 bits (265), Expect = 3e-21
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
++NA+MA E + GTVCSVTYPLP EE++ +GLA DGC+M+AS+VLFTSVKSA+A
Sbjct: 242 IVNANMAKEAHQLAAECGTVCSVTYPLPKEEIENHGLAHDGCKMDASSVLFTSVKSAQAC 301
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LHQ+E+ G +WARQL G + R+ I R
Sbjct: 302 VASLHQKEVHGATLWARQLGGEGSKTQRWKLILR 335
>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
thaliana] gi|16604631|gb|AAL24108.1| unknown protein
[Arabidopsis thaliana] gi|27754736|gb|AAO22811.1|
unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 106 bits (265), Expect = 3e-21
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
L NA+MA+ V +R K+ GTVCSV YPLP EEL GL +DGC+ EASAVLFTSVKSA A+
Sbjct: 243 LANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAA 302
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LHQ E+KG +WARQL G + ++ I R
Sbjct: 303 VAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIR 336
>ref|XP_007200315.1| hypothetical protein PRUPE_ppa001214mg [Prunus persica]
gi|462395715|gb|EMJ01514.1| hypothetical protein
PRUPE_ppa001214mg [Prunus persica]
Length = 879
Score = 105 bits (263), Expect = 5e-21
Identities = 53/94 (56%), Positives = 70/94 (74%)
Frame = -2
Query: 334 LLNADMADEVLNRCKQAGTVCSVTYPLPTEELDLYGLARDGCQMEASAVLFTSVKSARAS 155
L+NA MA+EV R ++ CS+TYPLP E+L+ +GL +DGC+M+AS+VL+ SVKSA AS
Sbjct: 83 LVNAGMAEEVHRRAREIDAECSITYPLPKEKLEQHGLMQDGCKMDASSVLYNSVKSAHAS 142
Query: 154 VAMLHQQEIKGGRVWARQLXXXGQRD*RYVFISR 53
VA LHQ+EIKGG VWARQL G + ++ I R
Sbjct: 143 VATLHQKEIKGGIVWARQLGGEGAKTRKWKLIVR 176