BLASTX nr result
ID: Sinomenium22_contig00020434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020434
(620 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 238 1e-60
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 230 3e-58
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 224 2e-56
ref|XP_006350788.1| PREDICTED: transcription initiation factor I... 223 4e-56
ref|XP_004241212.1| PREDICTED: transcription initiation factor I... 221 1e-55
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr... 219 7e-55
ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prun... 214 2e-53
gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus... 211 1e-52
ref|XP_004294662.1| PREDICTED: transcription initiation factor I... 211 1e-52
gb|EXC10718.1| Transcription initiation factor IIA large subunit... 209 5e-52
ref|XP_004486980.1| PREDICTED: transcription initiation factor I... 207 2e-51
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu... 206 6e-51
ref|XP_003543527.1| PREDICTED: transcription initiation factor I... 206 6e-51
ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phas... 204 2e-50
ref|XP_002298340.1| transcription factor IIA large subunit famil... 201 1e-49
ref|XP_003547006.1| PREDICTED: transcription initiation factor I... 201 1e-49
ref|XP_004143132.1| PREDICTED: transcription initiation factor I... 200 3e-49
ref|XP_003539601.1| PREDICTED: transcription initiation factor I... 194 2e-47
ref|XP_004962494.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 189 6e-46
ref|XP_003597404.1| Transcription factor/ transcription initiati... 189 6e-46
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 238 bits (606), Expect = 1e-60
Identities = 135/249 (54%), Positives = 144/249 (57%), Gaps = 55/249 (22%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQR-PLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDF 178
RPSPYMQ+PSPW NQR PL VDVNVAYVEGR+E DRG SHQP TQDFFM SS KRKREDF
Sbjct: 145 RPSPYMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDF 204
Query: 179 APQIH-GSGYMPQQDGAGDATYDVFQSE-------------------------------- 259
Q H G GY+PQQDGAGDA Y+V ++E
Sbjct: 205 TTQYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKI 264
Query: 260 -------------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ--XXXXXX 376
+Y YQGV +EDYN VNTPA +DL A TPA AQ
Sbjct: 265 PQLDGPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDD 324
Query: 377 XXXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 556
NTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF
Sbjct: 325 DEPLNEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 384
Query: 557 TKATGEFDF 583
KATGEFDF
Sbjct: 385 NKATGEFDF 393
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown
function [Ricinus communis]
Length = 383
Score = 230 bits (586), Expect = 3e-58
Identities = 126/238 (52%), Positives = 140/238 (58%), Gaps = 44/238 (18%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYMQ PSPW+NQRP +DVN+AYVEGREE DRG S+QP TQDFF +S KRKREDFA
Sbjct: 147 RPSPYMQPPSPWINQRP-PLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFA 205
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q + G++PQQDGAGD ++V Q E
Sbjct: 206 AQYNNGGFIPQQDGAGDTPFEVLQVERDTVISADIEILSSVTRRGLKIPQLDGPIPDPYD 265
Query: 260 -------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ---XXXXXXXXXXXXXXXXX 409
+Y YQGVA+EDYN NTPA +DL A TPA+ Q
Sbjct: 266 DVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDD 325
Query: 410 XXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KATGEFDF
Sbjct: 326 DLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383
>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
gi|297746029|emb|CBI16085.3| unnamed protein product
[Vitis vinifera]
Length = 393
Score = 224 bits (570), Expect = 2e-56
Identities = 128/248 (51%), Positives = 137/248 (55%), Gaps = 54/248 (21%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRP-LGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDF 178
RP YM PSPWM QRP L VDVNVAYVEGR+E DRG S QP TQDFFM SS KRKREDF
Sbjct: 146 RPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDF 205
Query: 179 APQIHGSGYMPQQDGAGDATYDVFQSE--------------------------------- 259
Q H SGY+PQQDGAGD +VF+ E
Sbjct: 206 PSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIP 265
Query: 260 ------------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ--XXXXXXX 379
+Y YQGV +EDYN VNTPA +D+ AGTPAV Q
Sbjct: 266 QLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDD 325
Query: 380 XXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFT 559
NTQHLVLAQFDKVTRTKS+WKCTLKDGIMHINNKDILF
Sbjct: 326 EPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFN 385
Query: 560 KATGEFDF 583
KA GEFDF
Sbjct: 386 KANGEFDF 393
>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum tuberosum]
Length = 403
Score = 223 bits (568), Expect = 4e-56
Identities = 125/236 (52%), Positives = 136/236 (57%), Gaps = 42/236 (17%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREET-DRGASHQPTTQDFFMPSSSKRKREDF 178
RPSP+M PSPW+NQRP +DVNVAYVEGREE DRG S QP TQDFFM S+ KRKREDF
Sbjct: 170 RPSPFMHPPSPWLNQRP-PLDVNVAYVEGREEVGDRGGSQQPMTQDFFMNSAGKRKREDF 228
Query: 179 APQIHGSGYMPQQDGAGDATYDVFQS---------------------------------- 256
PQ H GY+PQQDGA D+ YD +S
Sbjct: 229 PPQYHNGGYIPQQDGAADSIYDNLKSGEGSNIQLELVTVGPVQASAYRIPQFDGPIPDSY 288
Query: 257 -------ELYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQXXXXXXXXXXXXXXXXXXX 415
+Y YQGV +EDYN VNTPA +D+ A TPA A Q
Sbjct: 289 DDALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPALQNDDIDDDDEPLNEDDDDDL 347
Query: 416 XXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KA GEFDF
Sbjct: 348 DDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 403
>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum lycopersicum]
Length = 401
Score = 221 bits (563), Expect = 1e-55
Identities = 124/235 (52%), Positives = 135/235 (57%), Gaps = 41/235 (17%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSP+M PSPW+NQRP +DVNVAYVEGREE DRG S QP TQDFFM S+ KRKREDF
Sbjct: 170 RPSPFMHPPSPWLNQRP-PLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFP 228
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQS----------------------------------- 256
PQ H GY+PQQDGA D+ YD +S
Sbjct: 229 PQYHNGGYIPQQDGAADSIYDNIKSGEGSNIQLELVTVGPVQAPAYRIPQFDGPIPDSYD 288
Query: 257 ------ELYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQXXXXXXXXXXXXXXXXXXXX 418
+Y YQGV +EDYN VNTPA +D+ A TPA Q
Sbjct: 289 DALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPA-PLQNDDIDDDDEPLNEDDDDELD 346
Query: 419 XXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KA GEFDF
Sbjct: 347 DVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 401
>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
gi|568870376|ref|XP_006488381.1| PREDICTED:
transcription initiation factor IIA subunit 1-like
[Citrus sinensis] gi|557526833|gb|ESR38139.1|
hypothetical protein CICLE_v10028561mg [Citrus
clementina]
Length = 406
Score = 219 bits (557), Expect = 7e-55
Identities = 127/246 (51%), Positives = 137/246 (55%), Gaps = 52/246 (21%)
Frame = +2
Query: 2 RPSPYMQAP-SPWMNQRP-LGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKRED 175
RPS YM P SPWMN RP L VDVNVAYVEGR+E DRG SHQP TQDFF S+ KRKRED
Sbjct: 161 RPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRED 220
Query: 176 FAPQIHGSGY-MPQQDGAGDATYDVFQSE------------------------------- 259
F Q H GY +PQQDGAGDA ++F+ E
Sbjct: 221 FPAQYHNGGYNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQ 280
Query: 260 -----------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQXXXXXXXXXX 388
+Y YQGV +EDYN VNTPA +D+ A TPAV Q
Sbjct: 281 LDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDE 340
Query: 389 XXXXXXXXXXXXXXXXXX-NTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKA 565
NTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILF KA
Sbjct: 341 PLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA 400
Query: 566 TGEFDF 583
TGEFDF
Sbjct: 401 TGEFDF 406
>ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prunus persica]
gi|462400973|gb|EMJ06530.1| hypothetical protein
PRUPE_ppa006992mg [Prunus persica]
Length = 386
Score = 214 bits (544), Expect = 2e-53
Identities = 120/242 (49%), Positives = 131/242 (54%), Gaps = 48/242 (19%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYMQ PSPWMN RP +DVN+AYVEGR+E DRG SHQP TQDFF +S KRKRED A
Sbjct: 146 RPSPYMQPPSPWMNHRP-PLDVNIAYVEGRDEVDRGTSHQPPTQDFFQMNSGKRKREDLA 204
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q G++PQQDGAGDA +VF+ E
Sbjct: 205 SQYPAGGFIPQQDGAGDAAPEVFEIEVSGGSTSIGGRACSEMVTCALRSTPKIPQLDGPI 264
Query: 260 ------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ--XXXXXXXXXXXXX 397
+Y YQG +EDYN NTP +DL TPA Q
Sbjct: 265 PDPYDDALSTPNIYNYQGTFNEDYNVANTPTPNDLPVSTPAPVVQNDVGDDDDDEPPLNE 324
Query: 398 XXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEF 577
NT HLVLAQFDKVTRTKSRWKCTLKDGIM INNKDILF KATGEF
Sbjct: 325 NDDDDLDDVDQGEEVNTHHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNKATGEF 384
Query: 578 DF 583
DF
Sbjct: 385 DF 386
>gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus guttatus]
Length = 396
Score = 211 bits (538), Expect = 1e-52
Identities = 120/228 (52%), Positives = 135/228 (59%), Gaps = 34/228 (14%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYMQ PSPW NQRP +DVNVAYVEGREE++RG HQ TTQDFF+ +S KRKR++F
Sbjct: 171 RPSPYMQPPSPWQNQRP-PLDVNVAYVEGREESERGGPHQQTTQDFFV-ASGKRKRDNFP 228
Query: 182 PQIHGSGYMPQQDGAGDATYD------------------VFQSE---------------L 262
PQ GY+PQQDGAGD D + QS+ +
Sbjct: 229 PQYQAGGYIPQQDGAGDNLSDEMKVVLDVIGQGGTSSSRIPQSDGPIPDPYDDVLSTPNI 288
Query: 263 YPYQG-VASEDYNTVNTPASHDLHAGTPAVAAQXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
Y YQG V +EDYN VNTP +++ A TPA
Sbjct: 289 YNYQGGVVNEDYNIVNTPMPNEMLAATPAPVQNDVIDDDEDEPLNEDDDDDGDELDEGED 348
Query: 440 XNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KATGEFDF
Sbjct: 349 LNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 396
>ref|XP_004294662.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Fragaria vesca subsp. vesca]
Length = 377
Score = 211 bits (538), Expect = 1e-52
Identities = 117/235 (49%), Positives = 131/235 (55%), Gaps = 41/235 (17%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYMQ PSPWM QRP +DVN+AYVEGR+E DRGASHQP TQDFF S+ KRKRE+
Sbjct: 144 RPSPYMQPPSPWMTQRP-PLDVNIAYVEGRDEVDRGASHQPPTQDFFTMSAGKRKREEIP 202
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
PQ G++PQQDGA DA + F+ E
Sbjct: 203 PQYQAGGFIPQQDGAADAIPEFFEIEICGGSTSIGRAYGKMSACTPKIPQLDGPIPDPYE 262
Query: 260 ------LYPYQGVASEDYNTVNTPASHDLH-AGTPAVAAQXXXXXXXXXXXXXXXXXXXX 418
+Y YQG +EDYN NTPA +D+ P V
Sbjct: 263 ELSTPNIYNYQGAFNEDYNIANTPAPNDVPVTPAPVVNDVGDDDEDDEPPLNENDDDDQD 322
Query: 419 XXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKD+LF KATGEFDF
Sbjct: 323 DVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDVLFNKATGEFDF 377
>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
Length = 404
Score = 209 bits (532), Expect = 5e-52
Identities = 116/235 (49%), Positives = 130/235 (55%), Gaps = 48/235 (20%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYMQ PSPWM+QRP +DVN+AYVEGR+E DRG SHQP TQDFFMP S KRKR++
Sbjct: 150 RPSPYMQPPSPWMSQRP-SLDVNIAYVEGRDEVDRGTSHQPPTQDFFMPPSGKRKRDELP 208
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q G++PQQDGAGD +VF+ E
Sbjct: 209 SQYQAGGFLPQQDGAGDVAPEVFEIEVIGGSTSDGTRGNSEILASVLGVSSKIPQLDGPI 268
Query: 260 ------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAA--QXXXXXXXXXXXXX 397
+Y YQGV +EDYN NTPA +DL AGTPA+ A
Sbjct: 269 PDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDLPAGTPAIPAPNDVGEDDDDEPPLNE 328
Query: 398 XXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTK 562
NTQHLVLAQFDKVTRTKSRWKCTLKDGIM INNKDILF K
Sbjct: 329 NDDDELDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNK 383
>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Cicer arietinum]
Length = 389
Score = 207 bits (527), Expect = 2e-51
Identities = 120/245 (48%), Positives = 130/245 (53%), Gaps = 51/245 (20%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RP YMQ PSPW+NQRP +DVNVAYVEGREE DRGAS+QP TQDFF KRKR D
Sbjct: 146 RPGTYMQPPSPWINQRP-PLDVNVAYVEGREEADRGASNQPMTQDFFTMPGGKRKRNDLP 204
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
PQ GY+PQQDG+GDA F+ E
Sbjct: 205 PQYDAGGYIPQQDGSGDAASGNFEIEVCGGGISINSQHTSFKGKMPADLERLASRIPQLD 264
Query: 260 --------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ---XXXXXXXXXX 388
+Y Y GV SEDYN NTPA ++ A TPA+ AQ
Sbjct: 265 GPIPYEDDVLSTPNIYNYGGVYSEDYNIANTPAPPEVPASTPALVAQNEVANEDDDDEPP 324
Query: 389 XXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKAT 568
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KAT
Sbjct: 325 LNENDDDDMDDLDQGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT 384
Query: 569 GEFDF 583
GEFDF
Sbjct: 385 GEFDF 389
>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
gi|550348134|gb|ERP66111.1| hypothetical protein
POPTR_0001s25120g [Populus trichocarpa]
Length = 405
Score = 206 bits (523), Expect = 6e-51
Identities = 119/246 (48%), Positives = 138/246 (56%), Gaps = 52/246 (21%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPS +MQ+PSP M+QRP +DVNVAYVEGR+E DRG SHQ TQDFFM SS KRKR DFA
Sbjct: 162 RPSHFMQSPSPLMHQRP-PLDVNVAYVEGRDEVDRGGSHQTLTQDFFM-SSGKRKRGDFA 219
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQ------------------------------------ 253
P+ + G++PQQDGA D+ +V Q
Sbjct: 220 PKYNNGGFIPQQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQVD 279
Query: 254 -------------SELYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ---XXXXXXXXX 385
+Y YQGVA+EDYN NTPA +DL A TPAV +Q
Sbjct: 280 GPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPL 339
Query: 386 XXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKA 565
NTQHL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILF KA
Sbjct: 340 NEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKA 399
Query: 566 TGEFDF 583
TGEF+F
Sbjct: 400 TGEFEF 405
>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX1 [Glycine max]
Length = 391
Score = 206 bits (523), Expect = 6e-51
Identities = 119/249 (47%), Positives = 133/249 (53%), Gaps = 55/249 (22%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RP+PYMQ+PSPWMNQRP +DVNVAYVEGR+E DRG S+QP TQDFF S KRKR D
Sbjct: 144 RPAPYMQSPSPWMNQRP-PLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLT 202
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q + GY+PQQDGAGDAT+ F+ E
Sbjct: 203 SQYNAGGYIPQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTSRIPQLD 262
Query: 260 ---------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ------XXXXXX 376
+Y Y V SEDYN NTPA ++ A TPA+ Q
Sbjct: 263 GPIPYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDD 322
Query: 377 XXXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 556
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF
Sbjct: 323 DEPPLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 382
Query: 557 TKATGEFDF 583
KATGEF+F
Sbjct: 383 NKATGEFEF 391
>ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phaseolus vulgaris]
gi|561023620|gb|ESW22350.1| hypothetical protein
PHAVU_005G146700g [Phaseolus vulgaris]
Length = 386
Score = 204 bits (519), Expect = 2e-50
Identities = 118/246 (47%), Positives = 132/246 (53%), Gaps = 52/246 (21%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RP+PYM+ PSPWMN RP +DVNVAYVEGR+E DRG S+QP TQDFF SS KRKR D
Sbjct: 142 RPAPYMKPPSPWMNPRP-PLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLT 200
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q + GY+PQQDGAGDA VF+ E
Sbjct: 201 SQYNSGGYIPQQDGAGDAALGVFEIEVNGGDISINSHHTISKAKVPADLERLTSRIPQLD 260
Query: 260 --------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ----XXXXXXXXX 385
+Y Y V SEDYN NTPA ++ A TPA+ AQ
Sbjct: 261 GPIPYEDDALSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALVAQNEVGNDDDDDDEP 320
Query: 386 XXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKA 565
NT HLVLAQFDKV+RTKSRWKCTLKDGIMHINNKDILF KA
Sbjct: 321 PLNEEDDDDLDDIEQGDDQNTHHLVLAQFDKVSRTKSRWKCTLKDGIMHINNKDILFNKA 380
Query: 566 TGEFDF 583
TGEF+F
Sbjct: 381 TGEFEF 386
>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
trichocarpa] gi|222845598|gb|EEE83145.1| transcription
factor IIA large subunit family protein [Populus
trichocarpa]
Length = 409
Score = 201 bits (512), Expect = 1e-49
Identities = 120/250 (48%), Positives = 139/250 (55%), Gaps = 56/250 (22%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNV------------AYVEGREETDRGASHQPTTQDFFM 145
RPS +MQ+PSP M+QRP +DVNV AYVEGR+E DRG SHQ TQDFFM
Sbjct: 162 RPSHFMQSPSPLMHQRP-PLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFFM 220
Query: 146 PSSSKRKREDFAPQIHGSGYMPQQDGAGDATYDVFQSE---------------------- 259
SS KRKR DFAP+ + G++PQQDGA D+ +V Q E
Sbjct: 221 -SSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVECDTITTKNREILARVSRSYVKI 279
Query: 260 -------------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ---XXXXX 373
+Y YQGVA+EDYN NTPA +DL A TPAV +Q
Sbjct: 280 PQVDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDD 339
Query: 374 XXXXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDIL 553
NTQHL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DIL
Sbjct: 340 DEPLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDIL 399
Query: 554 FTKATGEFDF 583
F KATGEF+F
Sbjct: 400 FNKATGEFEF 409
>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Glycine max]
Length = 390
Score = 201 bits (511), Expect = 1e-49
Identities = 117/248 (47%), Positives = 132/248 (53%), Gaps = 54/248 (21%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RP+PYMQ SPWMNQRP +DVNVAYVEGR+E D+G S+QP TQDFF +S KRKR D
Sbjct: 144 RPAPYMQPSSPWMNQRP-PLDVNVAYVEGRDEADKGTSNQPLTQDFFTRTSGKRKRNDLT 202
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSE---------------------------------- 259
Q + GY+PQQDGAGDA + VF+ E
Sbjct: 203 SQYNVGGYIPQQDGAGDAAHGVFEIEVSGGGISINSHHTISKEKMSADLERSTSRIPQLD 262
Query: 260 --------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ------XXXXXXX 379
+Y Y V SEDYN NTPA ++ A TPA+ AQ
Sbjct: 263 GPIPYDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLAQNEVGNDFDDDDDD 322
Query: 380 XXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFT 559
NT HLVLAQFDKV RTKSRWKCTLKDGIMHINNKDILF
Sbjct: 323 EPPLNEEDDDDLDDMEQGDDQNTHHLVLAQFDKVARTKSRWKCTLKDGIMHINNKDILFN 382
Query: 560 KATGEFDF 583
KATGEF+F
Sbjct: 383 KATGEFEF 390
>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Cucumis sativus] gi|449496658|ref|XP_004160191.1|
PREDICTED: transcription initiation factor IIA large
subunit-like [Cucumis sativus]
Length = 402
Score = 200 bits (508), Expect = 3e-49
Identities = 123/252 (48%), Positives = 136/252 (53%), Gaps = 58/252 (23%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREET-DRGAS--HQPTTQDFFMPSSSKRKRE 172
RP+PYMQ PS WM QR VDVN+AYVEGREE DRGA+ H TQDFFM +S KRKR+
Sbjct: 153 RPTPYMQPPS-WMGQRT-PVDVNIAYVEGREEAADRGAAGAHPSLTQDFFMMNSGKRKRD 210
Query: 173 DFAPQIHGSGYMPQQDGAGDATYDVFQSE------------------------------- 259
DFA Q +G++PQQDGAGDA VF+ E
Sbjct: 211 DFASQYQANGFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLK 270
Query: 260 --------------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ----XXX 367
+Y YQGV +EDYN NTPA +D AGTPAV Q
Sbjct: 271 IPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEE 330
Query: 368 XXXXXXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKD 547
+TQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKD
Sbjct: 331 EDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKD 390
Query: 548 ILFTKATGEFDF 583
ILF KATGEFDF
Sbjct: 391 ILFNKATGEFDF 402
>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX2 [Glycine max]
Length = 389
Score = 194 bits (493), Expect = 2e-47
Identities = 118/248 (47%), Positives = 133/248 (53%), Gaps = 54/248 (21%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRP---LGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKRE 172
RP PYMQ P PW +Q +DVNVAYVEGR+ +RGAS+QP TQDFFM SS KRKR+
Sbjct: 144 RPGPYMQPP-PWTSQNQNQRAPLDVNVAYVEGRDAAERGASNQPLTQDFFM-SSGKRKRD 201
Query: 173 DFAPQIHGSGYMPQQDGAGDATYDVFQSELY----------------------------- 265
+ A Q + GY+PQQDGAGDA +F+ E+Y
Sbjct: 202 EIASQYNAGGYIPQQDGAGDADSQIFEIEVYGGGISIDAGHSTSNGKMPAHSDRPASQIP 261
Query: 266 ------PYQ------------GVASEDYNTVNTPASHDLHAGTPAVAAQ----XXXXXXX 379
PY GV +EDYN NTPAS D+ A TPA AQ
Sbjct: 262 QFDGPIPYDDDVVSTPNMYNYGVFNEDYNIANTPASSDVPASTPAPVAQNEVDEEDDDDD 321
Query: 380 XXXXXXXXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFT 559
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF
Sbjct: 322 EPLNENDDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFN 381
Query: 560 KATGEFDF 583
KATGEF+F
Sbjct: 382 KATGEFEF 389
>ref|XP_004962494.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIA
subunit 1-like [Setaria italica]
Length = 436
Score = 189 bits (480), Expect = 6e-46
Identities = 109/238 (45%), Positives = 126/238 (52%), Gaps = 44/238 (18%)
Frame = +2
Query: 2 RPSPYMQAPSPWMNQRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFA 181
RPSPYM PSPWMNQRPLGVDVNVAYVEGRE+ DRG QP TQDF M SS KRKR+++
Sbjct: 201 RPSPYMPPPSPWMNQRPLGVDVNVAYVEGREDPDRGVQPQPLTQDFLMMSSGKRKRDEYP 260
Query: 182 PQIHGSGYMPQQDGAGDATYDVFQSELYPYQ----------------------------- 274
Q+ ++PQQDG+ D + S+ +Q
Sbjct: 261 GQLPSGSFVPQQDGSADQIVEFAVSKENAHQLWSSIMNKQETSTKSVTPVIPQRDGIQDD 320
Query: 275 --------GVASEDYNTVNTPASHDLHAGTPAVAAQ-------XXXXXXXXXXXXXXXXX 409
GV +EDYNT A + A TPAVA
Sbjct: 321 YNDQFFFPGVPTEDYNTPGESAEY--RAPTPAVATPKPRNDEGDDDDEPPLNEDDDDDDE 378
Query: 410 XXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEFDF 583
NTQHLVLAQFDKVTRTK+RWKCTLKDGIMH+N +D+LF KATGEFDF
Sbjct: 379 LDDLEQGEDEPNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKATGEFDF 436
>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
truncatula] gi|355486452|gb|AES67655.1| Transcription
factor/ transcription initiation factor [Medicago
truncatula] gi|388523053|gb|AFK49588.1| unknown
[Medicago truncatula]
Length = 388
Score = 189 bits (480), Expect = 6e-46
Identities = 113/242 (46%), Positives = 126/242 (52%), Gaps = 52/242 (21%)
Frame = +2
Query: 14 YMQAPSPWMN--QRPLGVDVNVAYVEGREETDRGASHQPTTQDFFMPSSSKRKREDFAPQ 187
+M PSPWMN QRP +DVNVAYVEGR+E DRGAS+QP TQDFF + KRKR D P
Sbjct: 148 FMPPPSPWMNMNQRP-PLDVNVAYVEGRDEADRGASNQPMTQDFFTMTGGKRKRNDLPPP 206
Query: 188 IHGSGYMPQQDGAGDATYDVFQSE------------------------------------ 259
GY+PQQDGAGDA F+ E
Sbjct: 207 YDAGGYIPQQDGAGDAVSGDFEIEVCGGSISFNSQHTNSKGKMPADLERLASRIPQLDGP 266
Query: 260 ------------LYPYQGVASEDYNTVNTPASHDLHAGTPAVAAQ--XXXXXXXXXXXXX 397
+Y Y GV +EDYN NTPA ++ A TPA+ AQ
Sbjct: 267 IPYEDDVLSTPNIYNYGGVFNEDYNIANTPAPPEVPASTPALVAQNEAVNEDEDDEPLNE 326
Query: 398 XXXXXXXXXXXXXXXNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKATGEF 577
+T HLVLAQFDKVTRTKSRWKCTLKDGIMHIN KDILF KATGEF
Sbjct: 327 DDDDDLDDLDQEDDQDTNHLVLAQFDKVTRTKSRWKCTLKDGIMHINKKDILFNKATGEF 386
Query: 578 DF 583
DF
Sbjct: 387 DF 388