BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00020351
         (2004 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   331   7e-88
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   330   1e-87
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   326   2e-86
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   326   2e-86
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              326   3e-86
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   325   4e-86
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   325   4e-86
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]        325   5e-86
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   325   6e-86
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   325   6e-86
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   323   1e-85
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu...   322   3e-85
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   322   3e-85
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   322   3e-85
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca...   322   3e-85
ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago trunca...   322   3e-85
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   322   3e-85
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   322   4e-85
ref|XP_007225761.1| hypothetical protein PRUPE_ppa004469mg [Prun...   322   5e-85
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   320   1e-84

>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
           gi|557537401|gb|ESR48519.1| hypothetical protein
           CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  331 bits (849), Expect = 7e-88
 Identities = 163/227 (71%), Positives = 195/227 (85%)
 Frame = +2

Query: 29  ESTELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFV 208
           E+T+L +  ++K  S  +  E ++    NGE K L   G  F YGE+E++RFNRILKH+V
Sbjct: 301 ENTDLSLDLDSKNDSKVMAEERSV----NGEEKLLKGSG--FCYGEEEKKRFNRILKHYV 354

Query: 209 GTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGL 388
           G+HNFHNFTTRTKAEDPSARRYI+SF A+SVVNVEG+DF+KCEVVGQSFMLHQIRKMIGL
Sbjct: 355 GSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGL 414

Query: 389 AVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAY 568
           AVAV+RNCAPESL++ ALQ+DV I VPTAPEVGLYLDEC+F SYN+KWK++HEE+SMKAY
Sbjct: 415 AVAVVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAY 474

Query: 569 AEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGEN 709
            EEA++FKM+ I+SHIA TEQKEGVVALWLHSLN+RNYPDL FLG +
Sbjct: 475 EEEAENFKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLRFLGND 521


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Citrus sinensis]
          Length = 526

 Score =  330 bits (846), Expect = 1e-87
 Identities = 161/227 (70%), Positives = 195/227 (85%)
 Frame = +2

Query: 29  ESTELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFV 208
           E+T+L +  ++K  S  +  E ++    NGE K L   G  F YGE+E++RFNRILKH+V
Sbjct: 301 ENTDLSLDLDSKNDSKVMAEERSV----NGEEKLLKGSG--FCYGEEEKKRFNRILKHYV 354

Query: 209 GTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGL 388
           G+HNFHNFTTRTKAEDPSARRYI+SF A+SVVNVEG+DF+KCEVVGQSFMLHQIRKMIGL
Sbjct: 355 GSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGL 414

Query: 389 AVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAY 568
           AVAV+RNCAP+SL++ ALQ+DV I VPTAPEVGLYLDEC+F SYN+KWK++HEE+SMKAY
Sbjct: 415 AVAVVRNCAPQSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAY 474

Query: 569 AEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGEN 709
            EEA++FKM+ I+SHI  TEQKEGVVALWLHSLN+RNYPDL+FLG +
Sbjct: 475 EEEAENFKMKHIFSHITRTEQKEGVVALWLHSLNYRNYPDLHFLGND 521


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X2 [Glycine max]
          Length = 518

 Score =  326 bits (836), Expect = 2e-86
 Identities = 159/204 (77%), Positives = 178/204 (87%)
 Frame = +2

Query: 113 NGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDA 292
           NGE K  P +G  F YGEKERERFN+ILK FVGTHNFHNFTTRTKAEDP+ARRYI+SF+A
Sbjct: 272 NGEDK--PTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNA 329

Query: 293 NSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPT 472
           N+ + VEG++FVKCEVVGQSFMLHQIRKMIGLAVA+MRNCAPESL+D ALQQDV I VPT
Sbjct: 330 NTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPT 389

Query: 473 APEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVAL 652
           APEVGLYLDEC FTSYNQKWK+ HEE+SMKAY +EA +FKM+ IYSHIA+TEQKEG VAL
Sbjct: 390 APEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVAL 448

Query: 653 WLHSLNHRNYPDLYFLGENGVCTN 724
           WLHSLNHRNYPDL  + E  +  N
Sbjct: 449 WLHSLNHRNYPDLRVINEEAIPNN 472


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X1 [Glycine max]
          Length = 548

 Score =  326 bits (836), Expect = 2e-86
 Identities = 159/204 (77%), Positives = 178/204 (87%)
 Frame = +2

Query: 113 NGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDA 292
           NGE K  P +G  F YGEKERERFN+ILK FVGTHNFHNFTTRTKAEDP+ARRYI+SF+A
Sbjct: 302 NGEDK--PTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNA 359

Query: 293 NSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPT 472
           N+ + VEG++FVKCEVVGQSFMLHQIRKMIGLAVA+MRNCAPESL+D ALQQDV I VPT
Sbjct: 360 NTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPT 419

Query: 473 APEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVAL 652
           APEVGLYLDEC FTSYNQKWK+ HEE+SMKAY +EA +FKM+ IYSHIA+TEQKEG VAL
Sbjct: 420 APEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVAL 478

Query: 653 WLHSLNHRNYPDLYFLGENGVCTN 724
           WLHSLNHRNYPDL  + E  +  N
Sbjct: 479 WLHSLNHRNYPDLRVINEEAIPNN 502


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  326 bits (835), Expect = 3e-86
 Identities = 160/246 (65%), Positives = 196/246 (79%), Gaps = 9/246 (3%)
 Frame = +2

Query: 47  VVEETKVSSLEVNPEPNLALNG---------NGEAKGLPADGVAFHYGEKERERFNRILK 199
           V EE K +S   N + N +++          + E +     G  F YG+KERERFNRIL 
Sbjct: 175 VQEEIKATSNNNNIDANNSISETIKEEAAKLSSEGENKLEKGSGFCYGDKERERFNRILG 234

Query: 200 HFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKM 379
           H+VGTHNFHNFTTR KAEDPSA+R+IVSFD N++V VEG++FVKCEVVGQSFMLHQIRKM
Sbjct: 235 HYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKM 294

Query: 380 IGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISM 559
           IGLAVA+MRN APESL++ AL +DV I VPTAPEVGLYLDEC F+SYN+KW+++HEE+SM
Sbjct: 295 IGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSM 354

Query: 560 KAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQ 739
           KAYAEEA++FKM+ +YSHIAATE KEGVVALWLHSLNHRNYPDL  +G+NG  ++G+N +
Sbjct: 355 KAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDL-CIGDNGAASDGKNGE 413

Query: 740 VGNTAE 757
               A+
Sbjct: 414 EETMAD 419


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  325 bits (834), Expect = 4e-86
 Identities = 164/253 (64%), Positives = 196/253 (77%), Gaps = 19/253 (7%)
 Frame = +2

Query: 5    GVVEETVFEST---ELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGV--------- 148
            GV+E++   S    +  V+ E   + L V  E   A + + E  GL +D           
Sbjct: 250  GVLEDSATTSDSNKQTSVLVENTATELNVGSE-GTAKSESSEMSGLGSDSEIVVSKESVN 308

Query: 149  -------AFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVN 307
                   +F YGE+E+ RFNRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA+++V 
Sbjct: 309  GKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVV 368

Query: 308  VEGLDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVG 487
            VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPESL++ ALQ+DV I VPTAPEVG
Sbjct: 369  VEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVG 428

Query: 488  LYLDECLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSL 667
            LYLDECLFTSYNQKWK+THEE+SMKAY E A+DFKM+QIYSHIA+TE K+G VALWLHSL
Sbjct: 429  LYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHSL 488

Query: 668  NHRNYPDLYFLGE 706
            NHRNYPDL  + E
Sbjct: 489  NHRNYPDLRVIDE 501


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  325 bits (834), Expect = 4e-86
 Identities = 164/253 (64%), Positives = 196/253 (77%), Gaps = 19/253 (7%)
 Frame = +2

Query: 5    GVVEETVFEST---ELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGV--------- 148
            GV+E++   S    +  V+ E   + L V  E   A + + E  GL +D           
Sbjct: 250  GVLEDSATTSDSNKQTSVLVENTATELNVGSE-GTAKSESSEMSGLGSDSEIVVSKESVN 308

Query: 149  -------AFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVN 307
                   +F YGE+E+ RFNRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA+++V 
Sbjct: 309  GKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVV 368

Query: 308  VEGLDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVG 487
            VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPESL++ ALQ+DV I VPTAPEVG
Sbjct: 369  VEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVG 428

Query: 488  LYLDECLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSL 667
            LYLDECLFTSYNQKWK+THEE+SMKAY E A+DFKM+QIYSHIA+TE K+G VALWLHSL
Sbjct: 429  LYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHSL 488

Query: 668  NHRNYPDLYFLGE 706
            NHRNYPDL  + E
Sbjct: 489  NHRNYPDLRVIDE 501


>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 621

 Score =  325 bits (833), Expect = 5e-86
 Identities = 159/240 (66%), Positives = 191/240 (79%)
 Frame = +2

Query: 38   ELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTH 217
            E G  E  +V    ++ E +    GN   +  P     F YGEKERERFNRILKH+ GTH
Sbjct: 383  ENGDSETNQVEGRTLDNEVSTGEEGNVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTH 442

Query: 218  NFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVA 397
            NFHNFTTRTKAEDP+A+R+I+SF+AN+V+ VEG++FVKCEVVGQSFMLHQIRKMIGLAVA
Sbjct: 443  NFHNFTTRTKAEDPAAQRFIISFNANTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVA 502

Query: 398  VMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEE 577
            +MRNC PESL++ ALQ+DV I +PTAPEVGLYLDECLF+SYN+KWK++HEE+SMKAYAEE
Sbjct: 503  IMRNCVPESLMENALQKDVNINIPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEE 562

Query: 578  AKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQVGNTAE 757
            A++FKM+ IYSHI  TEQKEGVVALWLHSLN+RNYPD   + +N   TN  +  V N  E
Sbjct: 563  AEEFKMKHIYSHIGLTEQKEGVVALWLHSLNYRNYPDFQAV-DNKNTTNNNSTDVENKVE 621


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  325 bits (832), Expect = 6e-86
 Identities = 160/251 (63%), Positives = 196/251 (78%), Gaps = 1/251 (0%)
 Frame = +2

Query: 8   VVEETVFESTELGVVEETKVSSLEVNPEPNLALNGNGE-AKGLPADGVAFHYGEKERERF 184
           + E   F+  E    E T  S      EP ++ +   +  +     G  F YG+KERERF
Sbjct: 256 IKEGRCFQDNETS--ESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERF 313

Query: 185 NRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLH 364
           NRIL H+VGTHNFHNFTTR KAEDPSA+R+IVSFD N++V VEG++FVKCEVVGQSFMLH
Sbjct: 314 NRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLH 373

Query: 365 QIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETH 544
           QIRKMIGLAVA+MRN APESL++ AL +DV I VPTAPEVGLYLDEC F+SYN+KW+++H
Sbjct: 374 QIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSH 433

Query: 545 EEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTN 724
           EE+SMKAYAEEA++FKM+ +YSHIAATE KEGVVALWLHSLNHRNYPDL  +G+NG  ++
Sbjct: 434 EEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDL-CIGDNGAASD 492

Query: 725 GENAQVGNTAE 757
           G+N +    A+
Sbjct: 493 GKNGEEETMAD 503


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  325 bits (832), Expect = 6e-86
 Identities = 160/251 (63%), Positives = 196/251 (78%), Gaps = 1/251 (0%)
 Frame = +2

Query: 8    VVEETVFESTELGVVEETKVSSLEVNPEPNLALNGNGE-AKGLPADGVAFHYGEKERERF 184
            + E   F+  E    E T  S      EP ++ +   +  +     G  F YG+KERERF
Sbjct: 312  IKEGRCFQDNETS--ESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERF 369

Query: 185  NRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLH 364
            NRIL H+VGTHNFHNFTTR KAEDPSA+R+IVSFD N++V VEG++FVKCEVVGQSFMLH
Sbjct: 370  NRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLH 429

Query: 365  QIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETH 544
            QIRKMIGLAVA+MRN APESL++ AL +DV I VPTAPEVGLYLDEC F+SYN+KW+++H
Sbjct: 430  QIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSH 489

Query: 545  EEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTN 724
            EE+SMKAYAEEA++FKM+ +YSHIAATE KEGVVALWLHSLNHRNYPDL  +G+NG  ++
Sbjct: 490  EEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDL-CIGDNGAASD 548

Query: 725  GENAQVGNTAE 757
            G+N +    A+
Sbjct: 549  GKNGEEETMAD 559


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
           melo]
          Length = 519

 Score =  323 bits (829), Expect = 1e-85
 Identities = 163/251 (64%), Positives = 191/251 (76%)
 Frame = +2

Query: 5   GVVEETVFESTELGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERF 184
           G+ +    E + LG   E  VS   VN        G  +  G      +F YGE+E+ RF
Sbjct: 282 GIAKSESSEMSGLGNDSEIVVSKESVN--------GKEKPSG------SFKYGEEEKARF 327

Query: 185 NRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLH 364
           NRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA++ V VEG++FVKCEVVGQSFMLH
Sbjct: 328 NRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLH 387

Query: 365 QIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETH 544
           QIRKM+GLAVA+MRNCAPESL++ ALQ+DV I VPTAPEVGLYLDECLFTSYNQKWK+TH
Sbjct: 388 QIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTH 447

Query: 545 EEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTN 724
           EE+SMKAY E A+DFKM+QIYSHIA+TE K+G VALWLHSLNHRNYPDL  + E      
Sbjct: 448 EEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDEVAKIAK 507

Query: 725 GENAQVGNTAE 757
             +  +   AE
Sbjct: 508 NTSVDMETQAE 518


>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
           gi|550344062|gb|EEE79946.2| hypothetical protein
           POPTR_0002s01580g [Populus trichocarpa]
          Length = 516

 Score =  322 bits (826), Expect = 3e-85
 Identities = 166/243 (68%), Positives = 192/243 (79%), Gaps = 15/243 (6%)
 Frame = +2

Query: 8   VVEETVFESTELG---VVEETKVSS----LEVNPEPNLAL-----NGNGE---AKGLPAD 142
           V E  +F++   G   V+ E+ +SS      VNPE    +     NG+ E   +K     
Sbjct: 242 VNETKIFQNDGSGSKSVMPESVISSNSEDANVNPESKDEIIVSVENGDDEKTKSKEEMVK 301

Query: 143 GVAFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLD 322
           G +F YGEKE+ERFNRIL ++VG+HNFHNFTTRTKAEDPSARRYIVSF+A + VNVEG++
Sbjct: 302 GSSFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIE 361

Query: 323 FVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDE 502
           FVKCEVVGQSFMLHQIRKMIG+AVA+MRNCAPESL+  ALQ+DV I VPTAPEVGLYLDE
Sbjct: 362 FVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDE 421

Query: 503 CLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNY 682
           C FTSYNQKWK++HEEISMK Y EEA+DFKM+ IYSHIA TE KEG VALWLHSLNHRNY
Sbjct: 422 CFFTSYNQKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGSVALWLHSLNHRNY 481

Query: 683 PDL 691
           PDL
Sbjct: 482 PDL 484


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X2 [Cicer arietinum]
          Length = 475

 Score =  322 bits (826), Expect = 3e-85
 Identities = 164/252 (65%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
 Frame = +2

Query: 8   VVEETVFESTELGVVEETKVSSLEVNPEPNLALNGNGEAKG--LPADGVAFHYGEKERER 181
           V  +T FE+   G   + +VS L    E N A+    +  G   PA    F YGEKERER
Sbjct: 228 VNSKTSFETVVSG---QDEVSPLNGGSENNSAVLEEEKVNGEDTPAKRSEFCYGEKERER 284

Query: 182 FNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFML 361
           FN+ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA++ V +EG++FVKCE+VGQSFML
Sbjct: 285 FNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGMEFVKCEIVGQSFML 344

Query: 362 HQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKET 541
           HQIRKM+GLAVA+MRNCAPESL++ ALQ DV ITVPTAPEVGLYLDEC FTSYNQKWK+T
Sbjct: 345 HQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDECFFTSYNQKWKDT 404

Query: 542 HEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCT 721
           HEE+SMKAY +EA+DFKM+ IYSHIA+TEQKEG V LWLHSLNHRNY DL  + E GV  
Sbjct: 405 HEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWLHSLNHRNYSDLRVVEEEGV-A 463

Query: 722 NGENAQVGNTAE 757
           N + +++   AE
Sbjct: 464 NEKKSEIEVVAE 475


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  322 bits (826), Expect = 3e-85
 Identities = 164/252 (65%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
 Frame = +2

Query: 8    VVEETVFESTELGVVEETKVSSLEVNPEPNLALNGNGEAKG--LPADGVAFHYGEKERER 181
            V  +T FE+   G   + +VS L    E N A+    +  G   PA    F YGEKERER
Sbjct: 258  VNSKTSFETVVSG---QDEVSPLNGGSENNSAVLEEEKVNGEDTPAKRSEFCYGEKERER 314

Query: 182  FNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFML 361
            FN+ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA++ V +EG++FVKCE+VGQSFML
Sbjct: 315  FNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGMEFVKCEIVGQSFML 374

Query: 362  HQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKET 541
            HQIRKM+GLAVA+MRNCAPESL++ ALQ DV ITVPTAPEVGLYLDEC FTSYNQKWK+T
Sbjct: 375  HQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDECFFTSYNQKWKDT 434

Query: 542  HEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCT 721
            HEE+SMKAY +EA+DFKM+ IYSHIA+TEQKEG V LWLHSLNHRNY DL  + E GV  
Sbjct: 435  HEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWLHSLNHRNYSDLRVVEEEGV-A 493

Query: 722  NGENAQVGNTAE 757
            N + +++   AE
Sbjct: 494  NEKKSEIEVVAE 505


>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
           gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
           [Medicago truncatula] gi|388510220|gb|AFK43176.1|
           unknown [Medicago truncatula]
          Length = 530

 Score =  322 bits (826), Expect = 3e-85
 Identities = 161/234 (68%), Positives = 187/234 (79%)
 Frame = +2

Query: 41  LGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHN 220
           LG++EE KV+        + A NG+G           F YGEKERERFN ILK +VGTHN
Sbjct: 301 LGILEEEKVN------REDTAANGSG-----------FCYGEKERERFNNILKCYVGTHN 343

Query: 221 FHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAV 400
           FHNFTTR K EDPSA+R+I+SFDA++ V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+
Sbjct: 344 FHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAI 403

Query: 401 MRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEA 580
           MRNCAPESL++ ALQ+DV ITVPTAPEVGLYLDEC FTSYNQKWK+THEE+SMKAY +EA
Sbjct: 404 MRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEA 463

Query: 581 KDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQV 742
           +DFKMQ IY HIA+TE KEG V LWLHSLNHRNYPDL  L   GV TN +  +V
Sbjct: 464 EDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGV-TNDKKVEV 516


>ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago truncatula]
           gi|355511409|gb|AES92551.1| tRNA pseudouridine synthase
           [Medicago truncatula]
          Length = 361

 Score =  322 bits (826), Expect = 3e-85
 Identities = 161/234 (68%), Positives = 187/234 (79%)
 Frame = +2

Query: 41  LGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHN 220
           LG++EE KV+        + A NG+G           F YGEKERERFN ILK +VGTHN
Sbjct: 132 LGILEEEKVN------REDTAANGSG-----------FCYGEKERERFNNILKCYVGTHN 174

Query: 221 FHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAV 400
           FHNFTTR K EDPSA+R+I+SFDA++ V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+
Sbjct: 175 FHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAI 234

Query: 401 MRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEA 580
           MRNCAPESL++ ALQ+DV ITVPTAPEVGLYLDEC FTSYNQKWK+THEE+SMKAY +EA
Sbjct: 235 MRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEA 294

Query: 581 KDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQV 742
           +DFKMQ IY HIA+TE KEG V LWLHSLNHRNYPDL  L   GV TN +  +V
Sbjct: 295 EDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGV-TNDKKVEV 347


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
           gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
           [Medicago truncatula]
          Length = 530

 Score =  322 bits (826), Expect = 3e-85
 Identities = 161/234 (68%), Positives = 187/234 (79%)
 Frame = +2

Query: 41  LGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHN 220
           LG++EE KV+        + A NG+G           F YGEKERERFN ILK +VGTHN
Sbjct: 301 LGILEEEKVN------REDTAANGSG-----------FCYGEKERERFNNILKCYVGTHN 343

Query: 221 FHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAV 400
           FHNFTTR K EDPSA+R+I+SFDA++ V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+
Sbjct: 344 FHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAI 403

Query: 401 MRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEA 580
           MRNCAPESL++ ALQ+DV ITVPTAPEVGLYLDEC FTSYNQKWK+THEE+SMKAY +EA
Sbjct: 404 MRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEA 463

Query: 581 KDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQV 742
           +DFKMQ IY HIA+TE KEG V LWLHSLNHRNYPDL  L   GV TN +  +V
Sbjct: 464 EDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGV-TNDKKVEV 516


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
           [Medicago truncatula]
          Length = 530

 Score =  322 bits (825), Expect = 4e-85
 Identities = 161/234 (68%), Positives = 187/234 (79%)
 Frame = +2

Query: 41  LGVVEETKVSSLEVNPEPNLALNGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHN 220
           LG++EE KV+        + A NG+G           F YGEKERERFN ILK +VGTHN
Sbjct: 301 LGILEEEKVN------REDTAANGSG-----------FCYGEKERERFNNILKCYVGTHN 343

Query: 221 FHNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAV 400
           FHNFTTR K EDPSA+R+I+SFDA++ V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+
Sbjct: 344 FHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAI 403

Query: 401 MRNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEA 580
           MRNCAPESL++ ALQ+DV ITVPTAPEVGLYLDEC FTSYNQKWK+THEE+SMKAY +EA
Sbjct: 404 MRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEA 463

Query: 581 KDFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLGENGVCTNGENAQV 742
           +DFKMQ IY HIA+TE KEG V LWLHSLNHRNYPDL  L   GV TN +  +V
Sbjct: 464 EDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLGILDGEGV-TNDKKVEV 516


>ref|XP_007225761.1| hypothetical protein PRUPE_ppa004469mg [Prunus persica]
           gi|462422697|gb|EMJ26960.1| hypothetical protein
           PRUPE_ppa004469mg [Prunus persica]
          Length = 508

 Score =  322 bits (824), Expect = 5e-85
 Identities = 156/240 (65%), Positives = 189/240 (78%), Gaps = 5/240 (2%)
 Frame = +2

Query: 53  EETKVSSLEVNPEPNLAL---NGNGEAKGLPADGVAFHYGEKERERFNRILKHFVGTHNF 223
           E+T ++S  +N    +++   N NGE K     G  + YGEKE++RFNRIL  + GTHNF
Sbjct: 269 EDTDLNSKPLNDTTKVSVGEENANGEEKPEKGSGSEYCYGEKEKDRFNRILNCYEGTHNF 328

Query: 224 HNFTTRTKAEDPSARRYIVSFDANSVVNVEGLDFVKCEVVGQSFMLHQIRKMIGLAVAVM 403
           HNFTTRTKA DP+ARRYI+SF+AN+ V + G+DFVKCEVVGQSFMLHQIRKMIGLAVA+ 
Sbjct: 329 HNFTTRTKAADPAARRYIISFNANTTVTIGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIF 388

Query: 404 RNCAPESLVDVALQQDVRITVPTAPEVGLYLDECLFTSYNQKWKETHEEISMKAYAEEAK 583
           RNCAPESL+++ALQ+DV + VPTAPEVGLYLDEC F SYNQKW ++HEE+SMK Y +EA+
Sbjct: 389 RNCAPESLLEIALQKDVNVNVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAE 448

Query: 584 DFKMQQIYSHIAATEQKEGVVALWLHSLNHRNYPDLYFLG--ENGVCTNGENAQVGNTAE 757
           DFKM+ IY HIA+TEQKEGVV LWLHSLNHRNYPDL       +G  +N E+  VGN AE
Sbjct: 449 DFKMKHIYPHIASTEQKEGVVGLWLHSLNHRNYPDLCTTAADNDGNTSNEESVDVGNVAE 508


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao]
           gi|508726926|gb|EOY18823.1| Pseudouridine synthase
           [Theobroma cacao]
          Length = 507

 Score =  320 bits (821), Expect = 1e-84
 Identities = 151/187 (80%), Positives = 173/187 (92%)
 Frame = +2

Query: 131 LPADGVAFHYGEKERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANSVVNV 310
           +P +   F YGE+E+  FNRILKH+VG+HNFHNFTTRTKAEDPSARRYIVSF AN+VVNV
Sbjct: 279 IPLEERRFCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNV 338

Query: 311 EGLDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLVDVALQQDVRITVPTAPEVGL 490
           EG+DFVKCEVVGQSFMLHQIRKMIG+AVAVMRNCAPESL++ AL++DV I VPTAPEVGL
Sbjct: 339 EGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGL 398

Query: 491 YLDECLFTSYNQKWKETHEEISMKAYAEEAKDFKMQQIYSHIAATEQKEGVVALWLHSLN 670
           YLDECLF SYNQKWK++HEE+SMKAY EEA++FKM+ IYSHIA+TE++EGVVALWLHSLN
Sbjct: 399 YLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLN 458

Query: 671 HRNYPDL 691
           HRNYPDL
Sbjct: 459 HRNYPDL 465