BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00020268
         (812 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257...   173   6e-41
ref|XP_006474566.1| PREDICTED: uncharacterized protein LOC102611...   161   3e-37
ref|XP_006474565.1| PREDICTED: uncharacterized protein LOC102611...   161   3e-37
ref|XP_006452905.1| hypothetical protein CICLE_v10008008mg [Citr...   157   4e-36
ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, puta...   146   1e-32
ref|XP_006381552.1| hypothetical protein POPTR_0006s13790g [Popu...   143   7e-32
ref|XP_007012525.1| Transcription factor bHLH69, putative isofor...   143   7e-32
emb|CBI27747.3| unnamed protein product [Vitis vinifera]              133   9e-29
ref|XP_006828665.1| hypothetical protein AMTR_s00129p00124210 [A...   129   2e-27
ref|XP_007203011.1| hypothetical protein PRUPE_ppa017709mg [Prun...   101   4e-19
gb|EXC13604.1| hypothetical protein L484_019561 [Morus notabilis]      98   4e-18
ref|XP_004289014.1| PREDICTED: uncharacterized protein LOC101298...    69   2e-09
ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [S...    69   3e-09
gb|ACF78576.1| unknown [Zea mays] gi|238014612|gb|ACR38341.1| un...    65   3e-08
gb|AFW71893.1| putative HLH DNA-binding domain superfamily prote...    65   4e-08
gb|AFW71892.1| putative HLH DNA-binding domain superfamily prote...    65   4e-08
gb|AFW76610.1| putative HLH DNA-binding domain superfamily prote...    64   7e-08
gb|ACG29975.1| helix-loop-helix DNA-binding domain containing pr...    64   7e-08
ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea ma...    64   7e-08
ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays] gi...    64   7e-08

>ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
          Length = 536

 Score =  173 bits (439), Expect = 6e-41
 Identities = 105/257 (40%), Positives = 147/257 (57%), Gaps = 3/257 (1%)
 Frame = +2

Query: 50  NYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCK--YMGVHLTNSTPNLSTVNHSSP 223
           ++GL KGLL  +A  Q++  + E NSSL G VNG+ +  Y+G+ L   T    +++  SP
Sbjct: 80  DHGLGKGLLLEEAPRQQDLQNTEGNSSLNGAVNGSSEVGYVGLQLNTPTSTPCSLDLGSP 139

Query: 224 ELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSL 403
           + LS++G  ++S     E   VG N +E S FQ  + + Q+L  IPQLW   SYG  SSL
Sbjct: 140 KQLSLIGGMSRSSRPFTELDHVGCNGNEPSDFQRSVGNFQALPPIPQLWSQPSYGGGSSL 199

Query: 404 SPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLS 583
           SPVM + K+  FGLQGEY+D + + + NRY+GD+ ILQ+ N+ +++ + G  E + H  S
Sbjct: 200 SPVMGEYKMQGFGLQGEYVDNEMDIMRNRYVGDE-ILQLDNISSAIPIKGKEEQHTHPFS 258

Query: 584 SFSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTP-AVAAGVCNGAAKPRM 760
             + G H  +                        S +  LP T    A+G CNG  KPR+
Sbjct: 259 PSAVGPHMTMT----------------------ASGLQSLPQTTVGTASGGCNGTGKPRV 296

Query: 761 RARRGQATDPHSIAERL 811
           RARRGQATDPHSIAERL
Sbjct: 297 RARRGQATDPHSIAERL 313


>ref|XP_006474566.1| PREDICTED: uncharacterized protein LOC102611966 isoform X2 [Citrus
           sinensis]
          Length = 372

 Score =  161 bits (407), Expect = 3e-37
 Identities = 105/255 (41%), Positives = 137/255 (53%), Gaps = 2/255 (0%)
 Frame = +2

Query: 53  YGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKY--MGVHLTNSTPNLSTVNHSSPE 226
           YG+DK LL  +   +K+G +C  N S    +N + K   +G+    + P L ++N  SP+
Sbjct: 76  YGIDKNLLSEETQYEKDGQNCNGNLS---SMNRSLKLGNVGLQYDPAIPTLGSMNLGSPK 132

Query: 227 LLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSLS 406
            L ++G    SP   ++S  VG N SE S  Q  LRD Q+++  P+LW P+SY +VSSLS
Sbjct: 133 QLPLIGEMTTSPSF-VDSEHVGGNSSELSDIQRSLRDLQTISPSPELWLPTSYEEVSSLS 191

Query: 407 PVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSS 586
            V+ Q +   F LQG  M+ D +  GNRY+G DKILQ   L AS+   G  EL NH LS 
Sbjct: 192 SVIEQPRTRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYLSASIVAKGEQELPNHPLSC 251

Query: 587 FSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRA 766
           FS+ +       VGL S  Q    N                      G CNG  K R+RA
Sbjct: 252 FSS-RPLPTVPTVGLPSLQQTASAN--------------------PTGGCNGTGKARVRA 290

Query: 767 RRGQATDPHSIAERL 811
           RRGQATDPHSIAERL
Sbjct: 291 RRGQATDPHSIAERL 305


>ref|XP_006474565.1| PREDICTED: uncharacterized protein LOC102611966 isoform X1 [Citrus
           sinensis]
          Length = 519

 Score =  161 bits (407), Expect = 3e-37
 Identities = 105/255 (41%), Positives = 137/255 (53%), Gaps = 2/255 (0%)
 Frame = +2

Query: 53  YGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKY--MGVHLTNSTPNLSTVNHSSPE 226
           YG+DK LL  +   +K+G +C  N S    +N + K   +G+    + P L ++N  SP+
Sbjct: 76  YGIDKNLLSEETQYEKDGQNCNGNLS---SMNRSLKLGNVGLQYDPAIPTLGSMNLGSPK 132

Query: 227 LLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSLS 406
            L ++G    SP   ++S  VG N SE S  Q  LRD Q+++  P+LW P+SY +VSSLS
Sbjct: 133 QLPLIGEMTTSPSF-VDSEHVGGNSSELSDIQRSLRDLQTISPSPELWLPTSYEEVSSLS 191

Query: 407 PVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSS 586
            V+ Q +   F LQG  M+ D +  GNRY+G DKILQ   L AS+   G  EL NH LS 
Sbjct: 192 SVIEQPRTRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYLSASIVAKGEQELPNHPLSC 251

Query: 587 FSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRA 766
           FS+ +       VGL S  Q    N                      G CNG  K R+RA
Sbjct: 252 FSS-RPLPTVPTVGLPSLQQTASAN--------------------PTGGCNGTGKARVRA 290

Query: 767 RRGQATDPHSIAERL 811
           RRGQATDPHSIAERL
Sbjct: 291 RRGQATDPHSIAERL 305


>ref|XP_006452905.1| hypothetical protein CICLE_v10008008mg [Citrus clementina]
           gi|557556131|gb|ESR66145.1| hypothetical protein
           CICLE_v10008008mg [Citrus clementina]
          Length = 519

 Score =  157 bits (397), Expect = 4e-36
 Identities = 104/255 (40%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
 Frame = +2

Query: 53  YGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKY--MGVHLTNSTPNLSTVNHSSPE 226
           YG+DK LL  +   +K+G +C  N S    +N + K   +G+    + P L ++N  SP+
Sbjct: 76  YGIDKNLLSEETQYEKDGQNCNGNLS---SMNRSLKLGNVGLQYDPAIPTLGSMNLGSPK 132

Query: 227 LLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSLS 406
            L ++G    SP   ++S  VG N SE S  Q  LRD Q+++  P+LW  +SY +VSSLS
Sbjct: 133 QLPLIGEMTTSPSF-VDSEHVGGNSSELSDIQRSLRDLQTISPSPELWLQTSYEEVSSLS 191

Query: 407 PVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSS 586
            V+ Q +   F LQG  M+ D +  GNRY+G DKILQ   L AS+   G  EL NH LS 
Sbjct: 192 SVIEQPRTRGFYLQGATMNHDLDTTGNRYVGMDKILQFDCLSASIVAKGEQELPNHPLSC 251

Query: 587 FSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRA 766
           FS+ +       VGL S  Q    N                      G CNG  K R+RA
Sbjct: 252 FSS-RPLPTVPTVGLPSLQQTASAN--------------------PTGGCNGTGKARVRA 290

Query: 767 RRGQATDPHSIAERL 811
           RRGQATDPHSIAERL
Sbjct: 291 RRGQATDPHSIAERL 305


>ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
           gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase
           beta chain, putative [Ricinus communis]
          Length = 592

 Score =  146 bits (368), Expect = 1e-32
 Identities = 101/257 (39%), Positives = 134/257 (52%), Gaps = 3/257 (1%)
 Frame = +2

Query: 50  NYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKY--MGVHLTNSTPNLSTVNHSSP 223
           +Y +DKGL  G A +QKEG +C  + S   M+NG+ K   MG+    + P L++V  S  
Sbjct: 138 DYVVDKGLFSGKAQSQKEGQNCNHDPS--PMINGSLKMKNMGLQYDTALPTLNSVGLSYS 195

Query: 224 ELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSL 403
           + L V+     SP +  ++   G NDS    +Q   +D Q+ +S+ QLWP +S+ DVSSL
Sbjct: 196 KQLPVL-DDLTSPLSFTKANRAGLNDSARFEYQRSFKDVQNPSSMTQLWPSTSFEDVSSL 254

Query: 404 SPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLS 583
           S  M QD    F LQG   D D + LG RY+  D ILQ+  L ASV       L  + LS
Sbjct: 255 SAAMGQDTTQQFDLQGNLGD-DLDFLGRRYISMDNILQLDKLSASVVSKDKENLQGYPLS 313

Query: 584 SFSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVA-AGVCNGAAKPRM 760
            F+ G +  +                        + VS L  T + A A  CNG  KPR+
Sbjct: 314 RFTVGSNMTMT----------------------TNGVSYLSQTASTAPAASCNGTGKPRV 351

Query: 761 RARRGQATDPHSIAERL 811
           RARRGQATDPHSIAERL
Sbjct: 352 RARRGQATDPHSIAERL 368


>ref|XP_006381552.1| hypothetical protein POPTR_0006s13790g [Populus trichocarpa]
           gi|550336258|gb|ERP59349.1| hypothetical protein
           POPTR_0006s13790g [Populus trichocarpa]
          Length = 511

 Score =  143 bits (361), Expect = 7e-32
 Identities = 97/256 (37%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
 Frame = +2

Query: 50  NYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKY--MGVHLTNSTPNLSTVNHSSP 223
           +Y +DK L+   A  Q +  +C  N S  GM  GN K+   G+      P LS++N+  P
Sbjct: 81  DYAVDKVLISEQARLQNDCQNCNGNPSPDGMARGNLKFGNTGLQCNGILPTLSSLNY--P 138

Query: 224 ELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSL 403
             L +VG    S  +  E+ + G N  E S +   L++ Q+L+SIPQLWP  SY  VSSL
Sbjct: 139 NQLPIVGDLT-SYLSFSEASNAGCNGREQSEYLRSLKNLQNLSSIPQLWPSQSYEGVSSL 197

Query: 404 SPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLS 583
            P+M QD++   GL+G  +D D + +G  Y+G D+IL++  L AS    G  +L +    
Sbjct: 198 PPLMGQDRIEGSGLRGGNLDDDMHIMGKGYMGMDEILRLDKLSASPTTEGKEDLQS---C 254

Query: 584 SFSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMR 763
            FS+G                + E N       LSS+ Q   T A     CNG  K R+R
Sbjct: 255 PFSSG----------------IAEPNVNMSMNQLSSMPQ--TTSAAPVEGCNGTGKTRVR 296

Query: 764 ARRGQATDPHSIAERL 811
           ARRG ATDPHSIAERL
Sbjct: 297 ARRGHATDPHSIAERL 312


>ref|XP_007012525.1| Transcription factor bHLH69, putative isoform 1 [Theobroma cacao]
           gi|590574864|ref|XP_007012526.1| Transcription factor
           bHLH69, putative isoform 1 [Theobroma cacao]
           gi|508782888|gb|EOY30144.1| Transcription factor bHLH69,
           putative isoform 1 [Theobroma cacao]
           gi|508782889|gb|EOY30145.1| Transcription factor bHLH69,
           putative isoform 1 [Theobroma cacao]
          Length = 541

 Score =  143 bits (361), Expect = 7e-32
 Identities = 100/254 (39%), Positives = 136/254 (53%), Gaps = 2/254 (0%)
 Frame = +2

Query: 56  GLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTP--NLSTVNHSSPEL 229
           G++ GLL G+   Q +G +C +NS+   M+NG+  +  V L  +T   +  +++  SP+ 
Sbjct: 79  GVELGLLSGEGEPQMDGQNCSSNSTKE-MLNGSLAFANVELQFNTAVHSSGSLSLGSPKD 137

Query: 230 LSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSLSP 409
           LSVVG    S     E G V  N+ E+S F+  L   ++L+ IP+LW P  Y  VSSL  
Sbjct: 138 LSVVGDLTPSLSFN-ERGHVICNEGESSEFRRSLTGLETLSPIPKLWHPQPYDGVSSLPT 196

Query: 410 VMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSSF 589
           +M Q ++ I  LQGE    + +G  NR++  DKILQ  NL AS+   G  ++ N   SSF
Sbjct: 197 LMGQTRMEISCLQGENGTVNNDGNINRFVEIDKILQPENLSASISAKGKQDMKNSLYSSF 256

Query: 590 STGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRAR 769
              +H     M+GL S               L S S  PN        CNG  KPR+RAR
Sbjct: 257 -PAEHQITKTMIGLPSL--------------LQSASPTPNNG------CNGIGKPRVRAR 295

Query: 770 RGQATDPHSIAERL 811
           RGQATDPHSIAERL
Sbjct: 296 RGQATDPHSIAERL 309


>emb|CBI27747.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  133 bits (334), Expect = 9e-29
 Identities = 78/180 (43%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
 Frame = +2

Query: 275 ESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGE 454
           E   VG N +E S FQ  + + Q+L  IPQLW   SYG  SSLSPVM + K+  FGLQGE
Sbjct: 10  ELDHVGCNGNEPSDFQRSVGNFQALPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGE 69

Query: 455 YMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQLADMVGLH 634
           Y+D + + + NRY+GD+ ILQ+ N+ +++ + G  E + H  S  + G H  +       
Sbjct: 70  YVDNEMDIMRNRYVGDE-ILQLDNISSAIPIKGKEEQHTHPFSPSAVGPHMTMT------ 122

Query: 635 SQSQLGEGNTIKHYTDLSSVSQLPNTP-AVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
                            S +  LP T    A+G CNG  KPR+RARRGQATDPHSIAERL
Sbjct: 123 ----------------ASGLQSLPQTTVGTASGGCNGTGKPRVRARRGQATDPHSIAERL 166


>ref|XP_006828665.1| hypothetical protein AMTR_s00129p00124210 [Amborella trichopoda]
           gi|548833455|gb|ERM96081.1| hypothetical protein
           AMTR_s00129p00124210 [Amborella trichopoda]
          Length = 513

 Score =  129 bits (323), Expect = 2e-27
 Identities = 106/271 (39%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
 Frame = +2

Query: 2   NYGLDKGLLPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGV-HL 178
           NYGL+KGL P     QN    +    G A ++      +    L   +  N     + H 
Sbjct: 80  NYGLNKGLFP----VQNQPTREAQDLGSAQSEHNKEASDRTFPLQQALESNATSGSLGHQ 135

Query: 179 TNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSI 358
            N++ ++ T   SS + L  VG S       IE GS G+  +ET  FQ  + DS  + S 
Sbjct: 136 LNASGSV-TPTCSSAQYLPGVGGSNGVVGGLIEHGSGGTKGNETVGFQQSIGDSLPINSA 194

Query: 359 PQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPAS 538
             L  PS YG V  L+P+M Q KL  FGL+ +YM+ DAN LG  YLG DK+  + N+PA+
Sbjct: 195 GALLRPS-YGGVP-LAPIMGQGKLEGFGLRNDYMEGDANLLGKGYLGVDKLPLLENIPAT 252

Query: 539 VHVNGHGELNNHCLSSFSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPA 718
              +   E  N  L SF+TG         GL +  Q G GN         S+SQL    A
Sbjct: 253 ---SEQDEPCNSHLPSFATGPQIISPRTGGLPTHQQHG-GN--------QSISQLHPVAA 300

Query: 719 VAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
              G CNG  +PR+RARRGQATDPHSIAERL
Sbjct: 301 TGGG-CNGGVRPRVRARRGQATDPHSIAERL 330


>ref|XP_007203011.1| hypothetical protein PRUPE_ppa017709mg [Prunus persica]
           gi|462398542|gb|EMJ04210.1| hypothetical protein
           PRUPE_ppa017709mg [Prunus persica]
          Length = 453

 Score =  101 bits (251), Expect = 4e-19
 Identities = 85/247 (34%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
 Frame = +2

Query: 74  LHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTPNLSTVNHSSPELLSVVGSSA 253
           L  DA  Q +G + + N S  G V+G+ K     L      ++  + +S E L + G+  
Sbjct: 77  LESDA--QDDGKNFKPNLS-NGKVDGSFKVENPGLQYDVDIVTPCSLASLEQLPLNGNMV 133

Query: 254 KSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDV-SSLSPVMAQDKL 430
           ++  + IE  +V  N+ E S+F+    D ++L SI QLWP  SY  V SSLSP M Q ++
Sbjct: 134 RTSLSTIEPENVVCNNREPSIFERFNGDFETLPSISQLWPLQSYEGVPSSLSPGMGQHRM 193

Query: 431 PIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQ 610
             FGL+GEY D                          +V G  +L N+ L SF++G    
Sbjct: 194 CSFGLKGEYGD--------------------------NVLGKQDLQNYPLPSFASGPQIT 227

Query: 611 LADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATDP 790
           +  M GL S  Q                     T    +  C G  KPRMRARRGQATDP
Sbjct: 228 MT-MSGLQSLQQA--------------------TSTTPSAECTGTGKPRMRARRGQATDP 266

Query: 791 HSIAERL 811
           HSIAERL
Sbjct: 267 HSIAERL 273


>gb|EXC13604.1| hypothetical protein L484_019561 [Morus notabilis]
          Length = 487

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 98/275 (35%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
 Frame = +2

Query: 8   GLDKGLLPGDALT------QNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMG 169
           G ++ L P DA +       +YG++ GL   D     +  H   N S  GMVN       
Sbjct: 59  GSNQSLAPQDASSVVLGSESDYGINIGLHSED-----DQNHFFGNPS-NGMVNDGAS--- 109

Query: 170 VHLTNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSL 349
             LTN        + + P   ++  SS   P    E G +  N  E S FQ    D Q+L
Sbjct: 110 -GLTNLADG--QYDMAIPSNGNISSSSLPFP----EVGHMQGNALELSDFQSFDADFQTL 162

Query: 350 TSIPQLWPPSSYGDVSSLSPVMAQDKLPIFGLQG-EYMDTDANGLGNRYLGDDKILQMGN 526
             IP L P   +  VSSLSP M Q ++  FGLQG EY+D D   + +R           N
Sbjct: 163 FPIPHLSPLPPFEGVSSLSPGMGQHRIGGFGLQGGEYVDNDFYSMESRST---------N 213

Query: 527 LPASVHVNGHGELNNHCLSSFSTGQHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLP 706
           L +S+  NG  +L N+ LSS ++G         GL S SQ+                   
Sbjct: 214 LSSSLSSNGTYDLLNNPLSSLASGPQITRTMAPGLQSLSQVTS----------------- 256

Query: 707 NTPAVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
           NTP    G  NG  KPR+RARRGQATDPHSIAERL
Sbjct: 257 NTPP---GESNGNGKPRVRARRGQATDPHSIAERL 288


>ref|XP_004289014.1| PREDICTED: uncharacterized protein LOC101298168 [Fragaria vesca
           subsp. vesca]
          Length = 714

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 61/182 (33%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
 Frame = +2

Query: 272 IESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSYGDVSS--LSPVMAQDKLPIFGL 445
           +E  +V  N  E SVFQ    D ++ + I QLWP  +Y  VSS    P M Q KL  +  
Sbjct: 362 LEPQNVRCNCCEQSVFQRLNGDFENPSPISQLWPLQAYEGVSSSLCPPGMGQQKLCSYSS 421

Query: 446 QGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQLADMV 625
              Y  +D        +  +K+ Q              E+ N+ L +F++G    +A M 
Sbjct: 422 NDIYELSDL-------VTTEKVKQ--------------EMGNYPLPTFASGPQIPMA-MT 459

Query: 626 GLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATDPHSIAE 805
           GL S  Q                     T    +  C G  KPR+RARRGQATDPHSIAE
Sbjct: 460 GLQSFPQ--------------------TTSTSPSAECIGPRKPRIRARRGQATDPHSIAE 499

Query: 806 RL 811
           RL
Sbjct: 500 RL 501


>ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
           gi|241916226|gb|EER89370.1| hypothetical protein
           SORBIDRAFT_10g006250 [Sorghum bicolor]
          Length = 489

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 91/302 (30%), Positives = 120/302 (39%), Gaps = 36/302 (11%)
 Frame = +2

Query: 14  DKGLLPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNG-----NCKYMGVHL 178
           D  +LP + LT        LL GD L++ +   CE    L  + N      N    GV  
Sbjct: 60  DSTMLPNEQLTYAGAGQTDLLPGDTLSRDK--LCENLLELQRLQNNSNLQSNLVAPGVLQ 117

Query: 179 TNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSI 358
            NSTP +     ++P L       ++ PHA   S S+ SN SE S F   L D  +++S 
Sbjct: 118 HNSTPGVFHPQLNTPGL-------SELPHAL--SSSIDSNGSEVSAF---LADVNAVSSA 165

Query: 359 PQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGNRY-------------LG 499
           P L   S++ + SS    M    L  F  QG   D+  N   +               L 
Sbjct: 166 PTLC--SAFQNASSF---MEPVNLEAFSFQGAQSDSVLNKTSHSNGNISVFDSATLASLH 220

Query: 500 DDKILQMGNLPASVHVNGHG-----------ELNNHC---LSSFSTGQHNQLADMVGL-- 631
           D K    G LP+   V               E N  C   L +F+      +A   G   
Sbjct: 221 DSKEFITGRLPSFASVKEANLASSGFKTQKQEQNAMCNVPLPAFTARNQMSVAATQGALI 280

Query: 632 --HSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATDPHSIAE 805
                S + E  +    +  S V   PN+     GV     KPR+RARRGQATDPHSIAE
Sbjct: 281 PQKIPSWINENKSEGPVSHPSDVQTQPNSAGNGVGV-----KPRVRARRGQATDPHSIAE 335

Query: 806 RL 811
           RL
Sbjct: 336 RL 337


>gb|ACF78576.1| unknown [Zea mays] gi|238014612|gb|ACR38341.1| unknown [Zea mays]
           gi|413952840|gb|AFW85489.1| pi starvation-induced
           transcription factor1 [Zea mays]
          Length = 481

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 92/308 (29%), Positives = 119/308 (38%), Gaps = 42/308 (13%)
 Frame = +2

Query: 14  DKGLLPGDALTQNYGLDKGLLHGDALTQK-------EGLHCEANSSLPGMVNGNCKYMGV 172
           D  +LP D LT        LL G+  ++        E    + NSSLP     N    GV
Sbjct: 60  DSTMLPNDQLTYAGARQTDLLPGETPSRDKLCENLLELQRLQNNSSLPS----NLVPPGV 115

Query: 173 HLTNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLT 352
              NSTP       ++P L       ++ PHA   S S+ SN SE S F   L D  +++
Sbjct: 116 LQHNSTPGAFHPQLNTPGL-------SELPHAL--SSSIDSNGSEVSAF---LADLNAVS 163

Query: 353 SIPQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGL----GN---------RY 493
           S   L   S++ + SS    M    L  F  QG   D+  N      GN           
Sbjct: 164 SASALC--STFQNASSF---MEPVNLEAFSFQGAQSDSVLNKTTHPNGNISVFDSAALAS 218

Query: 494 LGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQLA------------------- 616
           L D K    G LP+   V    +  N   S F T +  Q A                   
Sbjct: 219 LHDSKEFISGRLPSFASV----QETNVAASGFKTQKQEQNAVCNVPIPTFTARNQIAVAA 274

Query: 617 ---DMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATD 787
               ++     S + E  +    +  S V   PN+     GV     KPR+RARRGQATD
Sbjct: 275 MPGSLIPQKIPSWINENKSEGPVSHPSDVQIQPNSVGNGVGV-----KPRVRARRGQATD 329

Query: 788 PHSIAERL 811
           PHSIAERL
Sbjct: 330 PHSIAERL 337


>gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 489

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 85/279 (30%), Positives = 117/279 (41%), Gaps = 17/279 (6%)
 Frame = +2

Query: 26  LPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTPNLST 205
           LPGD +T              +TQ+EGL  E NS+L   + G           S P   +
Sbjct: 82  LPGDDVT--------------VTQEEGLGFEVNSALVAGMLGPVL--------SAPCAVS 119

Query: 206 VNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSY 385
           +  S+P + S              S +  S  SE S   P  R    L   P  WP S++
Sbjct: 120 LADSAPVVCS--------------SSNDSSGGSEQSGLPPPPR-FLVLGEQPASWP-SAF 163

Query: 386 GDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGEL 565
             +SSL+    ++    FG  G   D D     +     +K  Q+GN  A +HV    E 
Sbjct: 164 PRISSLA---GEETSRSFGF-GAVSDNDLVRGSSCVADVNKYPQIGN--ARLHVEDDVEF 217

Query: 566 NNHCLSSFSTG--------QHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNT--- 712
           N   + SF+ G           +L+ +  L+S  QL   +  ++    S+ +    T   
Sbjct: 218 NTGKMLSFAPGLDFGDLQLSQKELSGLRHLNSGQQLSSFDATRNPEQSSNEASGGGTGLN 277

Query: 713 ------PAVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
                 PA  A   NGA KPR+RARRGQATDPHSIAERL
Sbjct: 278 APPFMVPANGAAG-NGAPKPRVRARRGQATDPHSIAERL 315


>gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 425

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 85/279 (30%), Positives = 117/279 (41%), Gaps = 17/279 (6%)
 Frame = +2

Query: 26  LPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTPNLST 205
           LPGD +T              +TQ+EGL  E NS+L   + G           S P   +
Sbjct: 82  LPGDDVT--------------VTQEEGLGFEVNSALVAGMLGPVL--------SAPCAVS 119

Query: 206 VNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSSY 385
           +  S+P + S              S +  S  SE S   P  R    L   P  WP S++
Sbjct: 120 LADSAPVVCS--------------SSNDSSGGSEQSGLPPPPR-FLVLGEQPASWP-SAF 163

Query: 386 GDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGNRYLGDDKILQMGNLPASVHVNGHGEL 565
             +SSL+    ++    FG  G   D D     +     +K  Q+GN  A +HV    E 
Sbjct: 164 PRISSLA---GEETSRSFGF-GAVSDNDLVRGSSCVADVNKYPQIGN--ARLHVEDDVEF 217

Query: 566 NNHCLSSFSTG--------QHNQLADMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNT--- 712
           N   + SF+ G           +L+ +  L+S  QL   +  ++    S+ +    T   
Sbjct: 218 NTGKMLSFAPGLDFGDLQLSQKELSGLRHLNSGQQLSSFDATRNPEQSSNEASGGGTGLN 277

Query: 713 ------PAVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
                 PA  A   NGA KPR+RARRGQATDPHSIAERL
Sbjct: 278 APPFMVPANGAAG-NGAPKPRVRARRGQATDPHSIAERL 315


>gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 473

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 83/292 (28%), Positives = 116/292 (39%), Gaps = 29/292 (9%)
 Frame = +2

Query: 23  LLPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTPNLS 202
           LLP + L+++  L + LL    L     L  ++N   PG+   N      H   +TP LS
Sbjct: 78  LLPAETLSRDK-LPENLLELQGLQNISNL--QSNLVAPGVFQHNLTPGVFHPQLNTPGLS 134

Query: 203 TVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSS 382
            + H+                    S S+ SN SE S F   L D  +++S P L   S+
Sbjct: 135 ELPHAL-------------------SSSIDSNGSEVSAF---LADLNAVSSAPTLC--ST 170

Query: 383 YGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGN-------------RYLGDDKILQMG 523
           + + SS    M    L  F +QG   D   N   +               L D K    G
Sbjct: 171 FQNASSF---MEPVNLEAFSIQGAQSDCVLNRTSHPNGNISVCDSAALASLHDSKEFISG 227

Query: 524 NLPASVHVNGHG-----------ELNNHC-LSSFSTGQHNQLADMVGL----HSQSQLGE 655
           +LP+   V               E N  C + +F+      +A M G        S++ +
Sbjct: 228 SLPSFASVQETNLAASGFKTQKQEQNAVCNIPTFTARNQMSVAAMQGALVPQKIPSRIND 287

Query: 656 GNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
             +    +  S V   PN+     GV     KPR+RARRGQATDPHSIAERL
Sbjct: 288 NKSEGPVSHPSDVQTQPNSAVNGVGV-----KPRVRARRGQATDPHSIAERL 334


>gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
          Length = 481

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 91/308 (29%), Positives = 119/308 (38%), Gaps = 42/308 (13%)
 Frame = +2

Query: 14  DKGLLPGDALTQNYGLDKGLLHGDALTQK-------EGLHCEANSSLPGMVNGNCKYMGV 172
           D  +LP D LT        LL G+  ++        E    + NS+LP     N    GV
Sbjct: 60  DSTMLPNDQLTYAGARQTDLLPGETPSRDKLCENLLELQRLQNNSNLPS----NLVPPGV 115

Query: 173 HLTNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLT 352
              NSTP       ++P L       ++ PHA   S S+ SN SE S F   L D  +++
Sbjct: 116 LQHNSTPGAFHPQLNTPGL-------SELPHAL--SSSIDSNGSEVSAF---LADLNAVS 163

Query: 353 SIPQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGL----GN---------RY 493
           S   L   S++ + SS    M    L  F  QG   D+  N      GN           
Sbjct: 164 SASALC--STFQNASSF---MEPVNLEAFSFQGAQSDSVLNKTTHPDGNISVFDSAALAS 218

Query: 494 LGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQLA------------------- 616
           L D K    G LP+   V    +  N   S F T +  Q A                   
Sbjct: 219 LHDSKEFISGRLPSFASV----QETNVAASGFKTQKQEQNAVCNVPIPTFTARNQIAVAA 274

Query: 617 ---DMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATD 787
               ++     S + E  +    +  S V   PN+     GV     KPR+RARRGQATD
Sbjct: 275 MPGSLIPQKIPSWINENKSEGPVSHPSDVQIQPNSVGNGVGV-----KPRVRARRGQATD 329

Query: 788 PHSIAERL 811
           PHSIAERL
Sbjct: 330 PHSIAERL 337


>ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
           gi|194691028|gb|ACF79598.1| unknown [Zea mays]
           gi|323388613|gb|ADX60111.1| bHLH transcription factor
           [Zea mays]
          Length = 438

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 83/292 (28%), Positives = 116/292 (39%), Gaps = 29/292 (9%)
 Frame = +2

Query: 23  LLPGDALTQNYGLDKGLLHGDALTQKEGLHCEANSSLPGMVNGNCKYMGVHLTNSTPNLS 202
           LLP + L+++  L + LL    L     L  ++N   PG+   N      H   +TP LS
Sbjct: 43  LLPAETLSRDK-LPENLLELQGLQNISNL--QSNLVAPGVFQHNLTPGVFHPQLNTPGLS 99

Query: 203 TVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLTSIPQLWPPSS 382
            + H+                    S S+ SN SE S F   L D  +++S P L   S+
Sbjct: 100 ELPHAL-------------------SSSIDSNGSEVSAF---LADLNAVSSAPTLC--ST 135

Query: 383 YGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGLGN-------------RYLGDDKILQMG 523
           + + SS    M    L  F +QG   D   N   +               L D K    G
Sbjct: 136 FQNASSF---MEPVNLEAFSIQGAQSDCVLNRTSHPNGNISVCDSAALASLHDSKEFISG 192

Query: 524 NLPASVHVNGHG-----------ELNNHC-LSSFSTGQHNQLADMVGL----HSQSQLGE 655
           +LP+   V               E N  C + +F+      +A M G        S++ +
Sbjct: 193 SLPSFASVQETNLAASGFKTQKQEQNAVCNIPTFTARNQMSVAAMQGALVPQKIPSRIND 252

Query: 656 GNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATDPHSIAERL 811
             +    +  S V   PN+     GV     KPR+RARRGQATDPHSIAERL
Sbjct: 253 NKSEGPVSHPSDVQTQPNSAVNGVGV-----KPRVRARRGQATDPHSIAERL 299


>ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
           gi|93359745|gb|ABF13333.1| bHLH transcription factor
           PTF1 [Zea mays]
          Length = 481

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 91/308 (29%), Positives = 119/308 (38%), Gaps = 42/308 (13%)
 Frame = +2

Query: 14  DKGLLPGDALTQNYGLDKGLLHGDALTQK-------EGLHCEANSSLPGMVNGNCKYMGV 172
           D  +LP D LT        LL G+  ++        E    + NS+LP     N    GV
Sbjct: 60  DSTMLPNDQLTYAGARQTDLLPGETPSRDKLCENLLELQRLQNNSNLPS----NLVPPGV 115

Query: 173 HLTNSTPNLSTVNHSSPELLSVVGSSAKSPHAPIESGSVGSNDSETSVFQPCLRDSQSLT 352
              NSTP       ++P L       ++ PHA   S S+ SN SE S F   L D  +++
Sbjct: 116 LQHNSTPGAFHPQLNTPGL-------SELPHAL--SSSIDSNGSEVSAF---LADLNAVS 163

Query: 353 SIPQLWPPSSYGDVSSLSPVMAQDKLPIFGLQGEYMDTDANGL----GN---------RY 493
           S   L   S++ + SS    M    L  F  QG   D+  N      GN           
Sbjct: 164 SASALC--STFQNASSF---MEPVNLEAFSFQGAQSDSVLNKTTHPDGNISVFDSAALAS 218

Query: 494 LGDDKILQMGNLPASVHVNGHGELNNHCLSSFSTGQHNQLA------------------- 616
           L D K    G LP+   V    +  N   S F T +  Q A                   
Sbjct: 219 LHDSKEFISGRLPSFASV----QETNVAASGFKTQKREQNAVCNVPIPTFTARNQIAVAA 274

Query: 617 ---DMVGLHSQSQLGEGNTIKHYTDLSSVSQLPNTPAVAAGVCNGAAKPRMRARRGQATD 787
               ++     S + E  +    +  S V   PN+     GV     KPR+RARRGQATD
Sbjct: 275 MPGSLIPQKIPSWINENKSEGPVSHPSDVQIQPNSVGNGVGV-----KPRVRARRGQATD 329

Query: 788 PHSIAERL 811
           PHSIAERL
Sbjct: 330 PHSIAERL 337