BLASTX nr result
ID: Sinomenium22_contig00020205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020205
(567 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 148 4e-53
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi... 149 4e-52
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr... 149 5e-52
ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prun... 143 5e-51
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 138 1e-49
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 136 2e-49
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 140 4e-49
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 134 5e-49
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam... 135 3e-48
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus... 132 6e-46
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi... 130 6e-45
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-44
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi... 135 2e-44
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas... 120 3e-41
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ... 119 7e-40
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr... 113 3e-38
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar... 115 4e-38
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps... 113 5e-38
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-34
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 105 5e-34
>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 550
Score = 148 bits (373), Expect(2) = 4e-53
Identities = 76/103 (73%), Positives = 83/103 (80%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S SSNP+ ISLFIDML TS +QPQRLTYPS+FKAYA+LGLA DGA LHGRV+KLGLESD
Sbjct: 96 SNSSNPEAAISLFIDMLVTSTVQPQRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESD 155
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
VRNTII MY+NCG L FDED FD VAWNSMIMGL+
Sbjct: 156 QFVRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLS 198
Score = 86.3 bits (212), Expect(2) = 4e-53
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
MLEN CT M +L K+HA+LIK GLA DT+AASR+LAFCA SPAGD+NYA VF I +PN
Sbjct: 26 MLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFRHIHNPN 84
Query: 186 L 188
L
Sbjct: 85 L 85
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Frame = +2
Query: 221 ISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNTIIF 400
+ LF +M Q I+P T SL A A+LG R G +H + K ++ +P+V II
Sbjct: 238 LDLFGEM-QKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIIN 296
Query: 401 MYANCGFLFDEDSSFDAV------AWNSMIMGLA 484
MY+ CG + F+A WNS+IMGLA
Sbjct: 297 MYSKCGSIEKAVHVFEAAPRTGLSCWNSIIMGLA 330
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 490 NHCGMVGEARKYFLVMTKIW 549
+H GMV +ARKYF VM + +
Sbjct: 365 SHSGMVEKARKYFSVMRETY 384
>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Citrus sinensis]
Length = 534
Score = 149 bits (376), Expect(2) = 4e-52
Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
SQSS P+N I LFIDML TSPIQPQRLTYPSLFKAYA+LGLARDGA LHGRV+K GLE D
Sbjct: 95 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 154
Query: 374 PLVRNTIIFMYANCGFL------FDE-DSSFDAVAWNSMIMGLA 484
+ NTII+MYANCGFL FDE D+ FD VAWNSMI+GLA
Sbjct: 155 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 198
Score = 82.0 bits (201), Expect(2) = 4e-52
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
S+L+ CT+M +L K+HA+LIK GLA+D IAASR+L FC TSPAGD+NYA VF++I+ P
Sbjct: 24 SLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFC-TSPAGDINYAYLVFTQIKKP 82
Query: 183 NL 188
NL
Sbjct: 83 NL 84
>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
gi|557539373|gb|ESR50417.1| hypothetical protein
CICLE_v10031197mg [Citrus clementina]
Length = 534
Score = 149 bits (376), Expect(2) = 5e-52
Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
SQSS P+N I LFIDML TSPIQPQRLTYPSLFKAYA+LGLARDGA LHGRV+K GLE D
Sbjct: 95 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 154
Query: 374 PLVRNTIIFMYANCGFL------FDE-DSSFDAVAWNSMIMGLA 484
+ NTII+MYANCGFL FDE D+ FD VAWNSMI+GLA
Sbjct: 155 QFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGLA 198
Score = 81.6 bits (200), Expect(2) = 5e-52
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
S+L+ CT+M +L K+HA+LIK GL +D IAASR+LAFC TSPAGD+NYA VF++I+ P
Sbjct: 24 SLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKP 82
Query: 183 NL 188
NL
Sbjct: 83 NL 84
>ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
gi|462412694|gb|EMJ17743.1| hypothetical protein
PRUPE_ppb007734mg [Prunus persica]
Length = 297
Score = 143 bits (361), Expect(2) = 5e-51
Identities = 73/103 (70%), Positives = 83/103 (80%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+S +P+ ISLFIDML TS I+P RLTYPS+FKAYA+LGLA+DGA LHGR+LKLGLESD
Sbjct: 96 SESPSPEIAISLFIDMLVTSAIEPHRLTYPSVFKAYAQLGLAQDGAQLHGRILKLGLESD 155
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
+RNTII MYANCGFL FDED D VAWNSMIMGL+
Sbjct: 156 QFIRNTIIHMYANCGFLIEARRMFDEDLECDTVAWNSMIMGLS 198
Score = 84.0 bits (206), Expect(2) = 5e-51
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
SMLE CT M +L K+HA+LIK GL DT+AASR+LAFCA SPAG++NYA VF IQ+P
Sbjct: 25 SMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRVLAFCA-SPAGNINYAYMVFRNIQNP 83
Query: 183 NL 188
NL
Sbjct: 84 NL 85
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 138 bits (347), Expect(2) = 1e-49
Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQN ISL+IDML TSP+QPQRLTYPS+FKA+A+L LA +GA LHG+++KLGLE+D
Sbjct: 97 SRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLEND 156
Query: 374 PLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLA 484
+RNTI+FMY NCGF +FD FD VAWN+MIMG+A
Sbjct: 157 SFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVA 199
Score = 84.7 bits (208), Expect(2) = 1e-49
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
SML+ +CTTM +L K+H+ LIK GLA+DT AASR+LAFCA SPAGD+NYA VF +IQ+P
Sbjct: 26 SMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAYLVFVQIQNP 84
Query: 183 NL 188
N+
Sbjct: 85 NI 86
Score = 54.7 bits (130), Expect(2) = 8e-07
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +2
Query: 242 LQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNTIIFMYANCGF 421
+Q I+P T SL A A LG R G +H ++K E +P+V II MY+ CG
Sbjct: 245 MQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGS 304
Query: 422 LFDEDSSFDAV------AWNSMIMGLAL 487
+ F + WNSMI+GLA+
Sbjct: 305 IDKAVQVFQSAPRRGLSCWNSMILGLAM 332
Score = 24.3 bits (51), Expect(2) = 8e-07
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 490 NHCGMVGEARKYFLVM 537
+H GMV +A+ YFL+M
Sbjct: 366 DHTGMVDKAKDYFLLM 381
>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
gi|587904202|gb|EXB92403.1| hypothetical protein
L484_021387 [Morus notabilis]
Length = 530
Score = 136 bits (342), Expect(2) = 2e-49
Identities = 71/103 (68%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ I LFIDML SP++PQRLTYPS+FKAYA+LGLA GA LHGRV+KLGL+ D
Sbjct: 101 SRSSTPQTAIFLFIDMLVGSPLEPQRLTYPSVFKAYAQLGLACFGAQLHGRVIKLGLDCD 160
Query: 374 PLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLA 484
VRNTII MY NCGF LFDE S D VAWNSMIMGL+
Sbjct: 161 RFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLS 203
Score = 85.9 bits (211), Expect(2) = 2e-49
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
SMLE C TM++L K+HA+LIK GL TIA+SRLLAFCA SPAG++NYAL VFS+IQ+P
Sbjct: 30 SMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCA-SPAGNINYALMVFSQIQNP 88
Query: 183 NL 188
NL
Sbjct: 89 NL 90
Score = 52.0 bits (123), Expect(2) = 3e-06
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +2
Query: 242 LQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNTIIFMYANCGF 421
+Q I+ T SL A RLG R G +H + K G+E + +V II MY CG
Sbjct: 249 MQGEGIKASEFTMVSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGS 308
Query: 422 LFDEDSSFDAV------AWNSMIMGLAL 487
+ S F WNSM+MGLA+
Sbjct: 309 VNKALSVFKTAPKLGLSCWNSMVMGLAM 336
Score = 25.0 bits (53), Expect(2) = 3e-06
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 490 NHCGMVGEARKYFLVM 537
NH GMV +AR YF +M
Sbjct: 371 NHSGMVDKARDYFSLM 386
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 140 bits (352), Expect(2) = 4e-49
Identities = 72/103 (69%), Positives = 80/103 (77%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
SQSS P + ISLFIDML S +QP RLTYPS+FKAYA+LGLA GA LHGRV+KLGL+ D
Sbjct: 100 SQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFD 159
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
P +RNTII+MYANCGFL F E FD VAWNSMIMGLA
Sbjct: 160 PFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLA 202
Score = 81.3 bits (199), Expect(2) = 4e-49
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
S+LE CTTM +L K+HA+L+K GLA+ +A S +LAFCATSP GD+NYA VF++I P
Sbjct: 28 SILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSP 87
Query: 183 NL 188
NL
Sbjct: 88 NL 89
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 242 LQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNTIIFMYANCGF 421
+Q I+P T SL A ARLG + G +H + K E + +V +II MY CG
Sbjct: 248 MQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGS 307
Query: 422 LFDEDSSFDAV------AWNSMIMGLAL 487
+ + F+ +WN+MI+GLA+
Sbjct: 308 IGEAFQVFEMAPLKGLSSWNTMILGLAM 335
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 490 NHCGMVGEARKYFLVMTKIW 549
N+ G+V +A++YF +M+K +
Sbjct: 369 NYSGLVDKAKEYFSLMSKTY 388
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 134 bits (338), Expect(2) = 5e-49
Identities = 69/104 (66%), Positives = 81/104 (77%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPI-QPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLES 370
SQSS P N ISLFIDM+ TSP QPQRLTYPS+FKAYA+LGLA +GA LHGRV+KLGLE+
Sbjct: 71 SQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLEN 130
Query: 371 DPLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
D ++NTI+ MY NCGFL FD + FD V WN+MI+GLA
Sbjct: 131 DQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLA 174
Score = 86.3 bits (212), Expect(2) = 5e-49
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
ML+ +CT+M +L K+HA LIK GLA+DTIAASR+LAFC TSPAGD+NYA VF++I++PN
Sbjct: 1 MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFC-TSPAGDINYAYLVFTQIRNPN 59
Query: 186 L 188
L
Sbjct: 60 L 60
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 242 LQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNTIIFMYANCGF 421
+Q I+P T SL A A LG R G +H ++K + +V II MY+ CG
Sbjct: 220 MQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGS 279
Query: 422 L------FDEDSSFDAVAWNSMIMGLALA 490
+ F WNS+I+GLA++
Sbjct: 280 IDKALQVFKSAPKKGLSCWNSLILGLAMS 308
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 490 NHCGMVGEARKYFLVMTKIW 549
NH GMV A+ YFL+M++ +
Sbjct: 341 NHAGMVDRAKDYFLLMSETY 360
>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 538
Score = 135 bits (339), Expect(2) = 3e-48
Identities = 72/104 (69%), Positives = 81/104 (77%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
SQSSNPQ ISLFIDML S IQP+RLTYPS+FKAYA+LGLA DG LHGRV+KLGL+ D
Sbjct: 97 SQSSNPQIAISLFIDMLVGSSIQPERLTYPSVFKAYAQLGLACDGRQLHGRVIKLGLDYD 156
Query: 374 PLVRNTIIFMYANCGFL------FDED-SSFDAVAWNSMIMGLA 484
+RNTII+MYANCG L FDE+ D VAWNSMI+GLA
Sbjct: 157 QFIRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGLA 200
Score = 83.2 bits (204), Expect(2) = 3e-48
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
S+LEN+CT+M +L KLHA LIK GL D IAASR+LAFC SPAGD+NYA VF++I++P
Sbjct: 26 SLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRVLAFC-VSPAGDMNYAYLVFTQIKNP 84
Query: 183 NL 188
NL
Sbjct: 85 NL 86
>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
Length = 505
Score = 132 bits (332), Expect(2) = 6e-46
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 6/102 (5%)
Frame = +2
Query: 197 QSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDP 376
QSS+P ISLF+DML S ++P+ LTYPS+FKAY +LGLA DGA LHGR++KLG E DP
Sbjct: 83 QSSHPHVAISLFVDMLTNSTLEPENLTYPSVFKAYTQLGLAGDGAQLHGRIIKLGFEHDP 142
Query: 377 LVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLA 484
+RN+II MYA+CG LFDED D VAWNSM+MGLA
Sbjct: 143 FIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLA 184
Score = 78.2 bits (191), Expect(2) = 6e-46
Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCAT-SPAGDVNYALSVFSKIQH 179
S+LE +C T+ +L K+HA LIK GLA+DTIA SR+LAFCA PA D++YA SVFS I+
Sbjct: 9 SLLETNCHTIKDLTKIHAQLIKTGLAKDTIAVSRILAFCAAPGPARDLDYAFSVFSHIEK 68
Query: 180 PNL 188
PNL
Sbjct: 69 PNL 71
>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum tuberosum]
Length = 522
Score = 130 bits (328), Expect(2) = 6e-45
Identities = 68/126 (53%), Positives = 88/126 (69%), Gaps = 13/126 (10%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ I LFI+ML S +QP LTYPS+FKAYAR GL ++GA LHGR++KLGLE D
Sbjct: 95 SESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGLVKNGAQLHGRIIKLGLEFD 154
Query: 374 PLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLALA--ITVAW-----LGK 514
+RNT+++MYA+CGF LFDED D V+WNSMIMGLA + I +W +
Sbjct: 155 TFIRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMST 214
Query: 515 QGNISW 532
+ ++SW
Sbjct: 215 RNDVSW 220
Score = 76.3 bits (186), Expect(2) = 6e-45
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATS-PAGDVNYALSVFSKIQHP 182
MLE CTTM +L K+HA+LIK+GL +D IA+SR+LAF A S P GD+NYA VF+ I++P
Sbjct: 23 MLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRVLAFSAKSPPIGDINYANLVFTHIENP 82
Query: 183 NL 188
NL
Sbjct: 83 NL 84
>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum lycopersicum]
Length = 522
Score = 129 bits (325), Expect(2) = 2e-44
Identities = 67/126 (53%), Positives = 89/126 (70%), Gaps = 13/126 (10%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ I LFI+ML S +QP LTYPS+FKAYAR G+A++GA LHGR++KLGLE D
Sbjct: 95 SESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGRIMKLGLEFD 154
Query: 374 PLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLALA--ITVAW-----LGK 514
+RNT+++MYA+CGF LFDED D V+WNSMI+GLA + I +W +
Sbjct: 155 TFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPT 214
Query: 515 QGNISW 532
+ ++SW
Sbjct: 215 RNDVSW 220
Score = 75.9 bits (185), Expect(2) = 2e-44
Identities = 38/61 (62%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATS-PAGDVNYALSVFSKIQHP 182
MLE CTTM +L K+HA+LIK+GL +D IAASR+LAF A S P GD+NYA VF+ I++P
Sbjct: 23 MLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVFTHIENP 82
Query: 183 N 185
N
Sbjct: 83 N 83
>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 135 bits (341), Expect(2) = 2e-44
Identities = 65/103 (63%), Positives = 83/103 (80%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
SQSSNPQ + LFIDML +S ++PQRLTYPS+FKAY++LGLA DGA LHGR++KLGL+ D
Sbjct: 99 SQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFD 158
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
P +RNTI++MYA GFL F+++ FD V+WNSMI+GLA
Sbjct: 159 PFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLA 201
Score = 69.3 bits (168), Expect(2) = 2e-44
Identities = 34/62 (54%), Positives = 49/62 (79%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
SM++ CTTM +L + HA+LIK+G A ++ AASR+LAFCA SP G+++YA VF ++Q+P
Sbjct: 28 SMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCA-SPLGNMDYAYLVFLQMQNP 86
Query: 183 NL 188
NL
Sbjct: 87 NL 88
Score = 56.6 bits (135), Expect = 4e-06
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 212 QNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESDPLVRNT 391
+ + LFI M Q IQP T SL A A++G R G +H + K L+ + +V
Sbjct: 238 KEALKLFIKM-QEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTA 296
Query: 392 IIFMYANCGFLFDEDSSFDAV------AWNSMIMGLAL 487
II MY CG + + F+ + +WNSMI GLA+
Sbjct: 297 IIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAV 334
>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
gi|561014990|gb|ESW13851.1| hypothetical protein
PHAVU_008G231600g [Phaseolus vulgaris]
Length = 525
Score = 120 bits (301), Expect(2) = 3e-41
Identities = 64/103 (62%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ ISLF+DML S ++PQRLTYPS+FKAYA+LG DGA LHGRV+KLGLE D
Sbjct: 98 SRSSTPQFAISLFVDMLY-SAVEPQRLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 156
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
+ NTI++MYAN G + FDE D VA NSMIMGLA
Sbjct: 157 QFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLA 199
Score = 74.3 bits (181), Expect(2) = 3e-41
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
+ML+N CT M +L K+H ++IK GLA D IAASR+L FCA+S +GD+NYA VF+ I +P
Sbjct: 27 TMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRVLTFCASS-SGDINYAYLVFTGIPNP 85
Query: 183 NL 188
NL
Sbjct: 86 NL 87
>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325851|gb|EFH56271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 542
Score = 119 bits (299), Expect(2) = 7e-40
Identities = 64/104 (61%), Positives = 76/104 (73%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSP-IQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLES 370
S+SS P+ IS+FIDML +SP ++PQRLTYPS+FKAYA LGLARDG LHGRV+K GLE
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLED 159
Query: 371 DPLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLA 484
D +RNT++ MY CG LF FD VAWNS+IMGLA
Sbjct: 160 DSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLA 203
Score = 70.5 bits (171), Expect(2) = 7e-40
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
+++ C+TM L ++HANLIK GL DT+AASR+LAFC SP+ D NYA VF++I H N
Sbjct: 30 LIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPS-DRNYAYLVFTRINHKN 88
>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
gi|557112734|gb|ESQ53018.1| hypothetical protein
EUTSA_v10017572mg [Eutrema salsugineum]
Length = 546
Score = 113 bits (282), Expect(2) = 3e-38
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS P+ I++FIDM ++ +PQRLTYPS+FKAYA LG ARDG LHG V+K GLE D
Sbjct: 100 SRSSFPEMSITIFIDMFSSASAKPQRLTYPSVFKAYASLGKARDGMQLHGMVIKEGLEDD 159
Query: 374 PLVRNTIIFMYANCGF------LFDEDSSFDAVAWNSMIMGLA 484
+RNT++ MYA CG +F FD VAWNSM+MGLA
Sbjct: 160 SFIRNTMLHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMMGLA 202
Score = 71.6 bits (174), Expect(2) = 3e-38
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
+++ C+TM L ++HANLIK GL DTIAASR+LAFC TSP+ D++YA +F++I H N
Sbjct: 30 LIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAFCCTSPS-DMSYAYLLFTRINHKN 88
>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein
[Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein
[Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 559
Score = 115 bits (288), Expect(2) = 4e-38
Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSP-IQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLES 370
S+SS P+ IS+FIDML +SP ++PQRLTYPS+FKAY RLG ARDG LHG V+K GLE
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 371 DPLVRNTIIFMYANCGFLFDE------DSSFDAVAWNSMIMGLA 484
D +RNT++ MY CG L + FD VAWNSMIMG A
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Score = 68.9 bits (167), Expect(2) = 4e-38
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
+++ C+TM L ++HA+LIK GL DT+ ASR+LAFC SP+ D+NYA VF++I H N
Sbjct: 30 LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKN 88
>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
gi|565472276|ref|XP_006293940.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562647|gb|EOA26837.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562648|gb|EOA26838.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
Length = 555
Score = 113 bits (282), Expect(2) = 5e-38
Identities = 63/104 (60%), Positives = 73/104 (70%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSP-IQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLES 370
SQSS P+ IS+FIDML +SP ++PQ LTYPS+FKAY RLG A DG LHGRVLK GLE
Sbjct: 95 SQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKAYGRLGQAIDGRQLHGRVLKEGLED 154
Query: 371 DPLVRNTIIFMYANCGFL------FDEDSSFDAVAWNSMIMGLA 484
D +RNT++ MY G L F + FD VAWNSMIMGLA
Sbjct: 155 DSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMIMGLA 198
Score = 70.9 bits (172), Expect(2) = 5e-38
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3
Query: 6 MLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHPN 185
+++ C+TM L ++H NLIK GL DT+AASR+LAFC SP+ D+NYA VF++I H N
Sbjct: 25 LIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVLAFCCASPS-DMNYAYLVFTRINHKN 83
>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cicer arietinum]
Length = 536
Score = 105 bits (262), Expect(2) = 1e-34
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 7/104 (6%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ ISLF+DML S IQPQ LTYPS+FKAYA+L G+ LHG V+KLGL+ D
Sbjct: 100 SRSSTPQFAISLFVDMLY-SQIQPQHLTYPSVFKAYAQLSAGDYGSQLHGMVVKLGLQRD 158
Query: 374 PLVRNTIIFMYANCGFL------FDEDSSF-DAVAWNSMIMGLA 484
+ NTII+MYAN G L FDE D VA+NSMIMG A
Sbjct: 159 QFIHNTIIYMYANSGLLSEAKRVFDEKLELGDVVAFNSMIMGFA 202
Score = 67.4 bits (163), Expect(2) = 1e-34
Identities = 28/62 (45%), Positives = 48/62 (77%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
+ML+N CTT+ + H ++ ++IK GL + IA++R+L FCA SP+G++NYA +F+++ +P
Sbjct: 29 TMLQNHCTTLKHFHMIYPHIIKTGLTHNPIASTRVLTFCA-SPSGNINYAYKLFARMPNP 87
Query: 183 NL 188
NL
Sbjct: 88 NL 89
>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 542
Score = 105 bits (263), Expect(2) = 5e-34
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 10/107 (9%)
Frame = +2
Query: 194 SQSSNPQNVISLFIDMLQTSPIQPQRLTYPSLFKAYARLGLARDGA*LHGRVLKLGLESD 373
S+SS PQ ISLF+DML S IQPQ LTYPS+FKAYA+LG A GA LHGRV+KLGL++D
Sbjct: 103 SRSSTPQFAISLFVDMLY-SQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQND 161
Query: 374 PLVRNTIIFMYANCGFLFDEDSSF----------DAVAWNSMIMGLA 484
+ NTII+MYAN G + + F D VA NSMIMG A
Sbjct: 162 QFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYA 208
Score = 64.7 bits (156), Expect(2) = 5e-34
Identities = 28/62 (45%), Positives = 47/62 (75%)
Frame = +3
Query: 3 SMLENSCTTMANLHKLHANLIKAGLARDTIAASRLLAFCATSPAGDVNYALSVFSKIQHP 182
+ML+N CTT+ + H+++ ++IK GL + IA++R L FCA SP+G++NYA +F ++ +P
Sbjct: 32 TMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPSGNINYAYKLFVRMPNP 90
Query: 183 NL 188
NL
Sbjct: 91 NL 92