BLASTX nr result
ID: Sinomenium22_contig00020093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00020093
(418 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633426.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosoma... 59 2e-07
ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatu... 56 1e-06
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 55 2e-06
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 55 2e-06
gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis] 55 2e-06
gb|EYU43439.1| hypothetical protein MIMGU_mgv11b016653mg, partia... 55 2e-06
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 55 2e-06
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 55 2e-06
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 55 2e-06
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 55 2e-06
ref|XP_007157192.1| hypothetical protein PHAVU_002G050200g, part... 55 2e-06
gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlise... 55 2e-06
gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa] 55 2e-06
ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 55 3e-06
ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 54 4e-06
ref|XP_003631467.1| PREDICTED: 30S ribosomal protein S12, chloro... 56 6e-06
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob... 54 7e-06
ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [A... 55 8e-06
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 55 8e-06
>ref|XP_003633426.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosomal protein S12-B,
chloroplastic-like [Vitis vinifera]
Length = 124
Score = 58.5 bits (140), Expect(2) = 2e-07
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QKTFCSL 130
+NFSTITPKKSNS L KV V LTS FEI YIP IGH+ Q+ F L
Sbjct: 41 VNFSTITPKKSNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVL 87
Score = 21.9 bits (45), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 87 LVRGGRVKDLP 97
>ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatula]
gi|355497904|gb|AES79107.1| 30S ribosomal protein S12
[Medicago truncatula]
Length = 195
Score = 55.8 bits (133), Expect(2) = 1e-06
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QKTFCSL 130
+NFSTITPKK NS L KV V LT FEII YIP IGH+ Q+ + L
Sbjct: 107 VNFSTITPKKPNSALRKVARVRLTYGFEIIAYIPGIGHNLQEHYVVL 153
Score = 21.9 bits (45), Expect(2) = 1e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 153 LVRGGRVKDLP 163
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 84 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 125
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 130 LVRGGRVKDLP 140
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 78 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 119
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 124 LVRGGRVKDLP 134
>gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]
Length = 158
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 22 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 63
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 68 LVRGGRVKDLP 78
>gb|EYU43439.1| hypothetical protein MIMGU_mgv11b016653mg, partial [Mimulus
guttatus]
Length = 152
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 69 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 110
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 115 LVRGGRVKDLP 125
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 54 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 95
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 100 LVRGGRVKDLP 110
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 47 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 88
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 93 LVRGGRVKDLP 103
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 51 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 92
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 97 LVRGGRVKDLP 107
>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 127
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 44 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 85
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 90 LVRGGRVKDLP 100
>ref|XP_007157192.1| hypothetical protein PHAVU_002G050200g, partial [Phaseolus
vulgaris] gi|561030607|gb|ESW29186.1| hypothetical
protein PHAVU_002G050200g, partial [Phaseolus vulgaris]
Length = 92
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 9 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 50
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 55 LVRGGRVKDLP 65
>gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlisea aurea]
Length = 92
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 9 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 50
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 55 LVRGGRVKDLP 65
>gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa]
Length = 89
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 6 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 47
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 52 LVRGGRVKDLP 62
>ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 115
Score = 54.7 bits (130), Expect(2) = 3e-06
Identities = 30/47 (63%), Positives = 32/47 (68%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QKTFCSL 130
IN STITPKK NS L KV V LTS FEI YIP IGH+ Q+ F L
Sbjct: 32 INLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVL 78
Score = 21.9 bits (45), Expect(2) = 3e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 78 LVRGGRVKDLP 88
>ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 162
Score = 54.3 bits (129), Expect(2) = 4e-06
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QKTFCSL 130
+N STITPKK NS L KV V LTS FEI YIP IGH+ Q+ F L
Sbjct: 79 VNLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVL 125
Score = 21.9 bits (45), Expect(2) = 4e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 125 LVRGGRVKDLP 135
>ref|XP_003631467.1| PREDICTED: 30S ribosomal protein S12, chloroplastic-like [Vitis
vinifera]
Length = 181
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QKTFCSL 130
+N STITPKK NS L KV+ V LTS FEI YIP IGH+ Q+ F L
Sbjct: 98 VNLSTITPKKPNSALGKVVRVRLTSGFEITTYIPGIGHNSQEHFVVL 144
>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
gi|350996664|gb|AEQ37174.1| ribosomal protein S12
(chloroplast) [Ginkgo biloba]
Length = 141
Score = 53.5 bits (127), Expect(2) = 7e-06
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFST TPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 54 VNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 95
Score = 21.9 bits (45), Expect(2) = 7e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 124 LVRGGRVKFIP 92
LVRGGRVK +P
Sbjct: 100 LVRGGRVKDLP 110
>ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
gi|548832465|gb|ERM95251.1| hypothetical protein
AMTR_s02071p00004290 [Amborella trichopoda]
Length = 140
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 57 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 98
>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 117
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 270 INFSTITPKKSNSGLNKVIEV*LTSRFEIIGYIPCIGHD*QK 145
+NFSTITPKK NS L KV V LTS FEI YIP IGH+ Q+
Sbjct: 60 VNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 101