BLASTX nr result

ID: Sinomenium22_contig00020004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00020004
         (1002 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006235909.1| PREDICTED: uncharacterized threonine-rich GP...    66   3e-08

>ref|XP_006235909.1| PREDICTED: uncharacterized threonine-rich GPI-anchored glycoprotein
           PJ4664.02-like [Rattus norvegicus]
          Length = 346

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
 Frame = -2

Query: 473 FTHI*DFLHIFVITVSHRCHFLHIFVLI-----CSMHISVHIC*SHITLFLVQSTHSCHI 309
           +TH+  + H+ + T  H C  +HI++ +       +HI VHIC   I + +    H C  
Sbjct: 128 YTHVHIYTHVHIRTHVHICTHVHIYIHVHIHTHAHIHIHVHIC---IPVHICTHVHIC-- 182

Query: 308 *IDLNIFV-IHKYSHIYHICYKVNMCFYLHIFIYMHF---VHICYKVHL 174
            I ++I+  +H Y+H+ HIC  V++C ++HI+ ++H    VHIC  VH+
Sbjct: 183 -IPVHIYTHVHIYTHV-HICTHVHICTHVHIYTHVHIYTHVHICTHVHI 229


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