BLASTX nr result
ID: Sinomenium22_contig00019747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00019747
(259 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ... 68 1e-09
emb|CBI36722.3| unnamed protein product [Vitis vinifera] 66 4e-09
ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis ... 65 1e-08
emb|CBI36723.3| unnamed protein product [Vitis vinifera] 65 1e-08
ref|XP_006442985.1| hypothetical protein CICLE_v10020184mg [Citr... 64 2e-08
ref|XP_007033902.1| SKP1/ASK-interacting protein 16 isoform 4 [T... 63 5e-08
ref|XP_007033901.1| SKP1/ASK-interacting protein 16 isoform 3 [T... 63 5e-08
ref|XP_007033900.1| SKP1/ASK-interacting protein 16 isoform 2 [T... 63 5e-08
ref|XP_007033899.1| SKP1/ASK-interacting protein 16 isoform 1 [T... 63 5e-08
ref|XP_002529478.1| protein with unknown function [Ricinus commu... 62 1e-07
ref|XP_007222261.1| hypothetical protein PRUPE_ppa005874mg [Prun... 60 3e-07
ref|NP_563759.1| F-box protein SKIP16 [Arabidopsis thaliana] gi|... 60 3e-07
ref|XP_006417957.1| hypothetical protein EUTSA_v10007687mg [Eutr... 60 4e-07
ref|XP_004309806.1| PREDICTED: F-box protein SKIP16-like [Fragar... 60 4e-07
ref|XP_002892320.1| skp1/ask-interacting protein 16 [Arabidopsis... 59 5e-07
ref|NP_001242370.1| uncharacterized protein LOC100778108 [Glycin... 59 7e-07
ref|NP_001241035.1| uncharacterized protein LOC100809876 [Glycin... 59 7e-07
ref|XP_006306469.1| hypothetical protein CARUB_v10012429mg [Caps... 59 9e-07
ref|XP_002309790.1| F-box family protein [Populus trichocarpa] g... 57 3e-06
gb|ACB87912.1| F-box-containing protein 2 [Malus domestica] 57 3e-06
>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
Length = 444
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 104 EMGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
EMGLE+LGD A+N I+SKL KD ++CVSK+L VSASEE LWL CSQ+L
Sbjct: 2 EMGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDL 53
>emb|CBI36722.3| unnamed protein product [Vitis vinifera]
Length = 354
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
MGLE+LGD A+N I+SKL KD ++CVSK+L VSASEE LWL CSQ+L
Sbjct: 1 MGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDL 51
>ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
Length = 443
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
M LE+LGD A+N I+SKL AKD ++CVSK+L VSASEE LWL CSQ+L
Sbjct: 1 MRLEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDL 51
>emb|CBI36723.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
M LE+LGD A+N I+SKL AKD ++CVSK+L VSASEE LWL CSQ+L
Sbjct: 1 MRLEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDL 51
>ref|XP_006442985.1| hypothetical protein CICLE_v10020184mg [Citrus clementina]
gi|568850033|ref|XP_006478735.1| PREDICTED: F-box
protein SKIP16-like [Citrus sinensis]
gi|557545247|gb|ESR56225.1| hypothetical protein
CICLE_v10020184mg [Citrus clementina]
Length = 440
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE +GD ALN+I+S LG KD A +AC+SKR +ASEE LW +FCS +LD
Sbjct: 1 MGLESVGDLALNVILSGLGPKDTAKVACLSKRFKAAASEECLWSKFCSDDLD 52
>ref|XP_007033902.1| SKP1/ASK-interacting protein 16 isoform 4 [Theobroma cacao]
gi|508712931|gb|EOY04828.1| SKP1/ASK-interacting protein
16 isoform 4 [Theobroma cacao]
Length = 469
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 LEREMGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
+ERE+GL++LGD AL++I+SKLG +D ++CVS+RL +S SE+ LW FC Q+L
Sbjct: 1 MEREVGLDQLGDLALHIILSKLGPEDTVRVSCVSRRLRLSTSEDSLWALFCFQDL 55
>ref|XP_007033901.1| SKP1/ASK-interacting protein 16 isoform 3 [Theobroma cacao]
gi|508712930|gb|EOY04827.1| SKP1/ASK-interacting protein
16 isoform 3 [Theobroma cacao]
Length = 483
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 LEREMGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
+ERE+GL++LGD AL++I+SKLG +D ++CVS+RL +S SE+ LW FC Q+L
Sbjct: 1 MEREVGLDQLGDLALHIILSKLGPEDTVRVSCVSRRLRLSTSEDSLWALFCFQDL 55
>ref|XP_007033900.1| SKP1/ASK-interacting protein 16 isoform 2 [Theobroma cacao]
gi|508712929|gb|EOY04826.1| SKP1/ASK-interacting protein
16 isoform 2 [Theobroma cacao]
Length = 429
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 LEREMGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
+ERE+GL++LGD AL++I+SKLG +D ++CVS+RL +S SE+ LW FC Q+L
Sbjct: 1 MEREVGLDQLGDLALHIILSKLGPEDTVRVSCVSRRLRLSTSEDSLWALFCFQDL 55
>ref|XP_007033899.1| SKP1/ASK-interacting protein 16 isoform 1 [Theobroma cacao]
gi|508712928|gb|EOY04825.1| SKP1/ASK-interacting protein
16 isoform 1 [Theobroma cacao]
Length = 503
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 LEREMGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
+ERE+GL++LGD AL++I+SKLG +D ++CVS+RL +S SE+ LW FC Q+L
Sbjct: 1 MEREVGLDQLGDLALHIILSKLGPEDTVRVSCVSRRLRLSTSEDSLWALFCFQDL 55
>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
gi|223531036|gb|EEF32888.1| protein with unknown
function [Ricinus communis]
Length = 446
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
MGLE +GD ALN I+S LG ++ A++ACVSKRL SASEE LW +FC Q+L
Sbjct: 1 MGLEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDL 51
>ref|XP_007222261.1| hypothetical protein PRUPE_ppa005874mg [Prunus persica]
gi|462419197|gb|EMJ23460.1| hypothetical protein
PRUPE_ppa005874mg [Prunus persica]
Length = 439
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE +GD AL+ I+SKL A+D+A ACVSK+L SASE+ LW FC+++LD
Sbjct: 1 MGLEAVGDLALHTILSKLEAEDSARAACVSKKLRASASEDSLWSHFCARDLD 52
>ref|NP_563759.1| F-box protein SKIP16 [Arabidopsis thaliana]
gi|75264072|sp|Q9LND7.1|SKI16_ARATH RecName: Full=F-box
protein SKIP16; AltName: Full=SKP1-interacting partner
16 gi|8810473|gb|AAF80134.1|AC024174_16 Contains
similarity to a F-box protein FBA from Mus musculus
gb|AF233226. ESTs gb|AV536237, gb|AV541425, gb|AV542477,
gb|AV543534, gb|AV536862, gb|AI100662, gb|Z27285,
gb|Z29939, gb|T21404, gb|T44511, gb|H37689 come from
this gene [Arabidopsis thaliana]
gi|16930491|gb|AAL31931.1|AF419599_1 At1g06110/T21E18_13
[Arabidopsis thaliana] gi|20466211|gb|AAM20423.1|
unknown protein [Arabidopsis thaliana]
gi|25084008|gb|AAN72153.1| unknown protein [Arabidopsis
thaliana] gi|332189819|gb|AEE27940.1| F-box protein
SKIP16 [Arabidopsis thaliana]
Length = 436
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/52 (57%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE+ GD L++++SK+G ++ A +ACVSKRL VSASEE LW FCS +L+
Sbjct: 1 MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLN 52
>ref|XP_006417957.1| hypothetical protein EUTSA_v10007687mg [Eutrema salsugineum]
gi|557095728|gb|ESQ36310.1| hypothetical protein
EUTSA_v10007687mg [Eutrema salsugineum]
Length = 432
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE+ GD L++I+SK+G ++ A +ACVSKRL VSASEE LW FCS +L+
Sbjct: 1 MGLEDAGDLVLHIILSKIGPENTARVACVSKRLQVSASEESLWSIFCSIDLN 52
>ref|XP_004309806.1| PREDICTED: F-box protein SKIP16-like [Fragaria vesca subsp. vesca]
Length = 435
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
MGLE +GD AL++I+ KLGA+++A ACVSK+L SASE+ LW FC+Q+L
Sbjct: 1 MGLEAVGDLALHIILRKLGAEESARAACVSKQLRASASEDPLWSHFCAQDL 51
>ref|XP_002892320.1| skp1/ask-interacting protein 16 [Arabidopsis lyrata subsp. lyrata]
gi|297338162|gb|EFH68579.1| skp1/ask-interacting protein
16 [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGDA-LNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE+ GD L++++SK+G + A +ACVSKRL VSASEE LW FCS +L+
Sbjct: 1 MGLEDAGDLILHIVLSKIGPESTARVACVSKRLKVSASEESLWSIFCSNDLN 52
>ref|NP_001242370.1| uncharacterized protein LOC100778108 [Glycine max]
gi|255641731|gb|ACU21136.1| unknown [Glycine max]
Length = 443
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
MGLE +GD A+++I+SKLGA+D A +ACVSKR SAS++ LW+ C EL
Sbjct: 1 MGLESVGDLAIHVILSKLGAQDTARVACVSKRFCSSASDDTLWINHCFHEL 51
>ref|NP_001241035.1| uncharacterized protein LOC100809876 [Glycine max]
gi|255635912|gb|ACU18303.1| unknown [Glycine max]
Length = 443
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
MGLE +GD A+N+I+ KLGA+D A +ACVSKR SAS++ LW+ C EL
Sbjct: 1 MGLESVGDLAINVILKKLGAQDIARVACVSKRFSSSASDDTLWINLCFNEL 51
>ref|XP_006306469.1| hypothetical protein CARUB_v10012429mg [Capsella rubella]
gi|482575180|gb|EOA39367.1| hypothetical protein
CARUB_v10012429mg [Capsella rubella]
Length = 432
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE+ GD L+ + SK+G + A +ACVSKRL VSASEE LW FCS++L+
Sbjct: 1 MGLEDAGDLVLHTVFSKIGPESTARVACVSKRLQVSASEESLWSIFCSRDLN 52
>ref|XP_002309790.1| F-box family protein [Populus trichocarpa]
gi|222852693|gb|EEE90240.1| F-box family protein
[Populus trichocarpa]
Length = 443
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQELD 259
MGLE +GD ALN+I++KLG K+ + CVSK+ ASEE LW FC Q+LD
Sbjct: 1 MGLESVGDLALNIILTKLGPKETVQVLCVSKKFKDLASEESLWSLFCRQDLD 52
>gb|ACB87912.1| F-box-containing protein 2 [Malus domestica]
Length = 443
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 107 MGLEELGD-ALNLIVSKLGAKDAAVLACVSKRLWVSASEEVLWLRFCSQEL 256
M LE +GD AL++I+SKLGA+D+A ACVS +L SAS+E LW FC+++L
Sbjct: 1 MNLEAVGDLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDL 51