BLASTX nr result
ID: Sinomenium22_contig00019729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00019729 (583 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai... 74 4e-11 gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum... 58 2e-08 gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii] 61 5e-08 gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] 56 2e-07 gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii] 58 2e-06 gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu] 56 8e-06 >gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops tauschii] Length = 950 Score = 73.6 bits (179), Expect = 4e-11 Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%) Frame = -3 Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGPRIRRSFVHQAALY 405 G+L +L PCD EV GSS GN+LLL C+ RLRTIDPKWSDPSP P S++H+AAL+ Sbjct: 4 GSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63 >gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu] Length = 1047 Score = 57.8 bits (138), Expect(2) = 2e-08 Identities = 29/40 (72%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -3 Query: 560 ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGP 444 EL PCD EV GSS GN+LL C+ RLRTID KWSDPSP P Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673 Score = 26.9 bits (58), Expect(2) = 2e-08 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 Query: 448 DPAYAGASCTRLPFI 404 DP AGA+CT LPF+ Sbjct: 672 DPGQAGATCTGLPFL 686 >gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii] Length = 562 Score = 61.2 bits (147), Expect(2) = 5e-08 Identities = 31/46 (67%), Positives = 34/46 (73%) Frame = -3 Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLLCKVRLRTIDPKWSDPSPGP 444 G+L +L PCD EVMGSS GN+LL RLRTIDPKWSDPSP P Sbjct: 353 GSLGAVVKLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDP 398 Score = 21.9 bits (45), Expect(2) = 5e-08 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -1 Query: 448 DPAYAGASCT 419 DPA AGA+CT Sbjct: 397 DPAQAGATCT 406 >gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] Length = 1176 Score = 55.8 bits (133), Expect(2) = 2e-07 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = -3 Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGP 444 G+L +L PCD EV GSS GN+LL C+ LRTIDPKWSDP P P Sbjct: 527 GSLGAVVKLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDP 573 Score = 25.4 bits (54), Expect(2) = 2e-07 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -1 Query: 448 DPAYAGASCTRLP 410 DPA AGA+CT LP Sbjct: 572 DPAQAGATCTGLP 584 >gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii] Length = 1424 Score = 58.2 bits (139), Expect = 2e-06 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%) Frame = +1 Query: 445 GPGEGSDHFGSIVRNLTLH-SKRLFPQLEPMTSRSHGDNSYRCAKAP 582 G GEGSDHFGSIVR+L LH KRLFP LEP+TS S G+N + P Sbjct: 63 GSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLP 109 >gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu] Length = 181 Score = 55.8 bits (133), Expect = 8e-06 Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +1 Query: 418 WCTKLLRMRGPGEGSDHFGSIVRNLTLH-SKRLFPQLEPMTSRSHGDNSYRCAKAP 582 W L + SDHFGSIVR L+LH KRLFP LEP+TS YRCA+AP Sbjct: 88 WLESFLPAKTLTSRSDHFGSIVRTLSLHFCKRLFPGLEPVTSLVTRQQLYRCARAP 143