BLASTX nr result

ID: Sinomenium22_contig00019729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00019729
         (583 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    74   4e-11
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    58   2e-08
gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     61   5e-08
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]        56   2e-07
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             58   2e-06
gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]     56   8e-06

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -3

Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGPRIRRSFVHQAALY 405
           G+L    +L PCD EV GSS GN+LLL C+ RLRTIDPKWSDPSP P    S++H+AAL+
Sbjct: 4   GSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 29/40 (72%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -3

Query: 560 ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGP 444
           EL PCD EV GSS GN+LL  C+ RLRTID KWSDPSP P
Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673



 Score = 26.9 bits (58), Expect(2) = 2e-08
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 448 DPAYAGASCTRLPFI 404
           DP  AGA+CT LPF+
Sbjct: 672 DPGQAGATCTGLPFL 686


>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 61.2 bits (147), Expect(2) = 5e-08
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = -3

Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLLCKVRLRTIDPKWSDPSPGP 444
           G+L    +L PCD EVMGSS GN+LL    RLRTIDPKWSDPSP P
Sbjct: 353 GSLGAVVKLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDP 398



 Score = 21.9 bits (45), Expect(2) = 5e-08
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 448 DPAYAGASCT 419
           DPA AGA+CT
Sbjct: 397 DPAQAGATCT 406


>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
          Length = 1176

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = -3

Query: 581 GALAQR*ELSPCDLEVMGSSCGNNLLL-CKVRLRTIDPKWSDPSPGP 444
           G+L    +L PCD EV GSS GN+LL  C+  LRTIDPKWSDP P P
Sbjct: 527 GSLGAVVKLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDP 573



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 448 DPAYAGASCTRLP 410
           DPA AGA+CT LP
Sbjct: 572 DPAQAGATCTGLP 584


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +1

Query: 445 GPGEGSDHFGSIVRNLTLH-SKRLFPQLEPMTSRSHGDNSYRCAKAP 582
           G GEGSDHFGSIVR+L LH  KRLFP LEP+TS S G+N     + P
Sbjct: 63  GSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLP 109


>gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]
          Length = 181

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +1

Query: 418 WCTKLLRMRGPGEGSDHFGSIVRNLTLH-SKRLFPQLEPMTSRSHGDNSYRCAKAP 582
           W    L  +     SDHFGSIVR L+LH  KRLFP LEP+TS       YRCA+AP
Sbjct: 88  WLESFLPAKTLTSRSDHFGSIVRTLSLHFCKRLFPGLEPVTSLVTRQQLYRCARAP 143


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