BLASTX nr result
ID: Sinomenium22_contig00019661
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00019661
(1433 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ... 489 e-135
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 489 e-135
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun... 473 e-130
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 470 e-130
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 470 e-130
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 470 e-130
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [... 464 e-128
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [... 463 e-128
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei... 461 e-127
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,... 459 e-126
ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF,... 454 e-125
ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF,... 454 e-125
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 452 e-124
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 452 e-124
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 452 e-124
ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phas... 451 e-124
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,... 446 e-122
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,... 442 e-121
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus... 437 e-120
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,... 437 e-120
>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
Length = 572
Score = 489 bits (1259), Expect = e-135
Identities = 240/342 (70%), Positives = 285/342 (83%), Gaps = 1/342 (0%)
Frame = -3
Query: 1221 PKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTR 1042
PK VHE R+ ++QRKIN G+D DPLRLFL G ETR+LL+AKEE EL V+I+ L R
Sbjct: 231 PKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 290
Query: 1041 LEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQ 862
LEEVK RLQS REPT+VEWA+A G+SC +LQS LH GNRSR+K+ AN R+VVH+AKQ
Sbjct: 291 LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 350
Query: 861 YQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLP 682
YQGRGLNLQDL+QEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAIFQ+SRTIRLP
Sbjct: 351 YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 410
Query: 681 ENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWA 505
EN+YSLL +VK AK L+IQE HH PT EE+A RVGI +EKL+ LL TRMPLSMQQPVWA
Sbjct: 411 ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 470
Query: 504 DQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSL 325
DQ+TTFQE+TAD+G+EIP++ V K+LMR HV NLL +L PKERRIIRLRFGI DG P++L
Sbjct: 471 DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 530
Query: 324 SQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
S+IG VFG +KERVRQLE RAL KL++CLS GL +Y LL+
Sbjct: 531 SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 572
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 489 bits (1259), Expect = e-135
Identities = 240/342 (70%), Positives = 285/342 (83%), Gaps = 1/342 (0%)
Frame = -3
Query: 1221 PKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTR 1042
PK VHE R+ ++QRKIN G+D DPLRLFL G ETR+LL+AKEE EL V+I+ L R
Sbjct: 220 PKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 279
Query: 1041 LEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQ 862
LEEVK RLQS REPT+VEWA+A G+SC +LQS LH GNRSR+K+ AN R+VVH+AKQ
Sbjct: 280 LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 339
Query: 861 YQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLP 682
YQGRGLNLQDL+QEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAIFQ+SRTIRLP
Sbjct: 340 YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 399
Query: 681 ENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWA 505
EN+YSLL +VK AK L+IQE HH PT EE+A RVGI +EKL+ LL TRMPLSMQQPVWA
Sbjct: 400 ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 459
Query: 504 DQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSL 325
DQ+TTFQE+TAD+G+EIP++ V K+LMR HV NLL +L PKERRIIRLRFGI DG P++L
Sbjct: 460 DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 519
Query: 324 SQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
S+IG VFG +KERVRQLE RAL KL++CLS GL +Y LL+
Sbjct: 520 SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561
>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
gi|462400636|gb|EMJ06193.1| hypothetical protein
PRUPE_ppa003513mg [Prunus persica]
Length = 568
Score = 473 bits (1216), Expect = e-130
Identities = 239/344 (69%), Positives = 284/344 (82%), Gaps = 1/344 (0%)
Frame = -3
Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
PK K I HE+ S D+++KI+ GF+ NDPLRLFL G ETRQLL+AKEE EL ++ L
Sbjct: 225 PKSKVIGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDL 284
Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
+LEEVK RLQ+QF REPTL+EWA+A G+SC IL+S L G SREK+ AN R+VVH+A
Sbjct: 285 FKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIA 344
Query: 867 KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
KQYQGRGL LQDLMQEGSMGLMKS+EKFKPQAGCRF+TYAYWWIRQ++RKAIFQ+SRTIR
Sbjct: 345 KQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIR 404
Query: 687 LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
LPENVYSLL +V AK IQE H+P EELA RVGI VEKLE LL++TRMPLSMQQPV
Sbjct: 405 LPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPV 464
Query: 510 WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
WADQ+TTFQE+TAD+GVEIP++ V K+LMR HV +LLSIL +ER IIRLR+GIEDG+ +
Sbjct: 465 WADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQR 524
Query: 330 SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
SLS+IG +FG++KERVRQLESRA KLR+ L +GLGAY LL+
Sbjct: 525 SLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 568
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 470 bits (1210), Expect = e-130
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 219 KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 278
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+EWA A G+SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 279 RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 338
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 339 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 398
Query: 684 PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 399 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 458
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 459 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 518
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 519 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 470 bits (1210), Expect = e-130
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 227 KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 286
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+EWA A G+SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 287 RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 346
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 347 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 406
Query: 684 PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 407 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 466
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 467 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 526
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 527 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 470 bits (1210), Expect = e-130
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 228 KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 287
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+EWA A G+SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 288 RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 347
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 348 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 407
Query: 684 PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 408 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 467
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 468 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 527
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 528 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 570
>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
rpoD, putative [Theobroma cacao]
Length = 568
Score = 464 bits (1194), Expect = e-128
Identities = 226/343 (65%), Positives = 287/343 (83%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
+PK + ET S R+ D++RK++ GFD NDPLRLFL G ET+QLL+AKEE EL +++ L
Sbjct: 226 QPKVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLM 285
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+VK +LQSQF REPTLVEWA+A G+ CS LQ+ LH GN SR+K+ AN R+VVH+AK
Sbjct: 286 RLEKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAK 345
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQ RGL+LQDL+QEGSMGLMKS+E+FKPQ GCRF+TYAYWWIRQ+IRK+I Q+SRT+RL
Sbjct: 346 QYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRL 405
Query: 684 PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PENV++LL +V +AK YI+E +H P+ EELA RVGI VEKL+ LLF+TRMPLSMQQ VW
Sbjct: 406 PENVHTLLSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVW 465
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
DQ+ TFQE+T D+G+EIP++ V K+LMR HV NLLS+L P+ER II+LRFGIE+ + S
Sbjct: 466 VDQDITFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEESKENS 525
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS+IG++FG++KERVRQLESRAL KL++CL++ GLGAY LL+
Sbjct: 526 LSEIGNMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568
>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 548
Score = 463 bits (1192), Expect = e-128
Identities = 236/343 (68%), Positives = 278/343 (81%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
K K I HE S R+ +Q+KIN GFD DPLRLFL G ET+QLL+AKEE EL +++ L
Sbjct: 206 KTKEIFHEPYSSRRAGVQKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLM 265
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
LE VK + + QF R+PTLVEWADA G+S S++QS LH GNRSREK+ AN R+VVH+AK
Sbjct: 266 SLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIAK 325
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRGL+LQDL+QEGSMGLMKSIEKFKPQ GCRF+TYAYWWIRQ++RKAIFQ+SRTIRL
Sbjct: 326 QYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIRL 385
Query: 684 PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PENVY L +V AK YI E H+PT EELA R+GI +LE LL+ RMPLSMQQ VW
Sbjct: 386 PENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTVW 445
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ TTFQEITAD VEIPEL V K+LMR HV +LL+IL P+ER+IIRLR+GIEDG+ KS
Sbjct: 446 ADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNPRERKIIRLRYGIEDGKKKS 505
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS+IGSVFG++KERVRQLESRAL KL++CL+ GL AYA LL+
Sbjct: 506 LSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEAYADLLV 548
>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
FACTOR family protein [Populus trichocarpa]
Length = 535
Score = 461 bits (1185), Expect = e-127
Identities = 232/343 (67%), Positives = 278/343 (81%), Gaps = 1/343 (0%)
Frame = -3
Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
PK K ++ ET + D+Q++++ GFD NDPLRLFL G ET+QLL+AKEE EL +I+ L
Sbjct: 192 PKTKDLIFETYDSKSADVQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDL 251
Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
LE VK RL+SQF REPTLVEWA A G+SC +L+ LH GNRSREK+ AN R+VVH+A
Sbjct: 252 MNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIA 311
Query: 867 KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
K+YQ RGL LQDL+QEG++GLMKSIEKFKPQAGCRF+TYAYWWIRQ+I KAIFQ+SRTIR
Sbjct: 312 KRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIR 371
Query: 687 LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
LPENVY LL +V AK YIQE H PT EE+A RVGI ++KLE LL TR PLSMQQ V
Sbjct: 372 LPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTV 431
Query: 510 WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
W+DQNTTFQEITAD+ +EIP++ V K+LMR H+ LL+IL KERRIIRLRFGIEDG+ K
Sbjct: 432 WSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQK 491
Query: 330 SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLL 202
SLS+IG+VFG++KERVRQLESRAL KL++C+ GL AYA LL
Sbjct: 492 SLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534
>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max]
Length = 554
Score = 459 bits (1181), Expect = e-126
Identities = 231/349 (66%), Positives = 282/349 (80%), Gaps = 7/349 (2%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINM------GFDQNDPLRLFLSGSETRQLLSAKEERELFV 1063
K K + E+ RK D+QR++ + G+D NDPLRLFLSG E+RQLL+ +EE +L
Sbjct: 206 KSKFLDEESYLERKSDVQRRLRLEKKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLIT 265
Query: 1062 EIKALTRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRL 883
+++ L+RLEEVK+RLQ+Q REPTL EWADA G SC LQ+ LH NRS+EK+ AN R+
Sbjct: 266 QLQDLSRLEEVKIRLQTQLRREPTLAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRM 325
Query: 882 VVHVAKQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQN 703
VVH+AK YQGRGL+LQDL QEGS GLMKSIEKFKP+AGCRF TYAYWWIR ++RKAIF +
Sbjct: 326 VVHIAKHYQGRGLSLQDLFQEGSTGLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLH 385
Query: 702 SRTIRLPENVYSLLRQVKNAKNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLS 526
SRTIRLPEN+Y+LL +V AK YIQE + HPT EELA +VGI +EK+++LLF++R P+S
Sbjct: 386 SRTIRLPENLYTLLGKVIEAKKSYIQEGNLHPTKEELARKVGITIEKMDNLLFASRNPIS 445
Query: 525 MQQPVWADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIE 346
MQQ VWADQ+TTFQEITADS +EIP++ V+K+LMR HVHNLL+IL PKER IIRLRFGIE
Sbjct: 446 MQQTVWADQDTTFQEITADSAIEIPDVTVSKQLMRMHVHNLLNILSPKERGIIRLRFGIE 505
Query: 345 DGEPKSLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
DGE K+LS IG VFG+TKERVRQLESRAL KLR+CL +GL AY LL+
Sbjct: 506 DGEEKTLSDIGKVFGLTKERVRQLESRALLKLRQCLESQGLDAYTDLLV 554
>ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Glycine max]
Length = 477
Score = 454 bits (1168), Expect = e-125
Identities = 237/385 (61%), Positives = 290/385 (75%), Gaps = 7/385 (1%)
Frame = -3
Query: 1332 YSLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRKINM- 1156
+ L STSLA + L+K K K I E+ RK D+QR++ +
Sbjct: 94 FGLASTSLA-NSSLKKNKVVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQRRLRLE 152
Query: 1155 -----GFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFNREPT 991
G+DQNDPLRLFLSG E+RQLL+ +EE L +++ L+R EEVK+RLQSQ REPT
Sbjct: 153 KKLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQLRREPT 212
Query: 990 LVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQEGSM 811
L EWADA G+SC LQ+ LH NRS+EK+ AN R+VVH+AK YQGRGL+LQDL QEGS
Sbjct: 213 LAEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGST 272
Query: 810 GLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNAKNLY 631
GLMKSI+KFKP+AGCRF TYAYWWIR +IRKAIF +SRTIRLPEN+Y+LL ++ AK Y
Sbjct: 273 GLMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSY 332
Query: 630 IQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADSGVEI 454
IQE + HPT EELA RVGI VEKL++LLF++R P+SMQQ +W DQ+TTFQEITADS +EI
Sbjct: 333 IQEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEI 392
Query: 453 PELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKERVRQL 274
P + V+K+LMR HVHNLL+IL PKE+ IIRLRFGIEDG+ K+LS IG VFG+TKERVRQL
Sbjct: 393 PGVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQL 452
Query: 273 ESRALDKLRKCLSREGLGAYAGLLI 199
E RAL KL++CL +GL AY LL+
Sbjct: 453 ECRALSKLKQCLESQGLDAYIDLLV 477
>ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Glycine max]
Length = 554
Score = 454 bits (1168), Expect = e-125
Identities = 237/385 (61%), Positives = 290/385 (75%), Gaps = 7/385 (1%)
Frame = -3
Query: 1332 YSLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRKINM- 1156
+ L STSLA + L+K K K I E+ RK D+QR++ +
Sbjct: 171 FGLASTSLA-NSSLKKNKVVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQRRLRLE 229
Query: 1155 -----GFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFNREPT 991
G+DQNDPLRLFLSG E+RQLL+ +EE L +++ L+R EEVK+RLQSQ REPT
Sbjct: 230 KKLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQLRREPT 289
Query: 990 LVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQEGSM 811
L EWADA G+SC LQ+ LH NRS+EK+ AN R+VVH+AK YQGRGL+LQDL QEGS
Sbjct: 290 LAEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGST 349
Query: 810 GLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNAKNLY 631
GLMKSI+KFKP+AGCRF TYAYWWIR +IRKAIF +SRTIRLPEN+Y+LL ++ AK Y
Sbjct: 350 GLMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSY 409
Query: 630 IQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADSGVEI 454
IQE + HPT EELA RVGI VEKL++LLF++R P+SMQQ +W DQ+TTFQEITADS +EI
Sbjct: 410 IQEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEI 469
Query: 453 PELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKERVRQL 274
P + V+K+LMR HVHNLL+IL PKE+ IIRLRFGIEDG+ K+LS IG VFG+TKERVRQL
Sbjct: 470 PGVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQL 529
Query: 273 ESRALDKLRKCLSREGLGAYAGLLI 199
E RAL KL++CL +GL AY LL+
Sbjct: 530 ECRALSKLKQCLESQGLDAYIDLLV 554
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 452 bits (1164), Expect = e-124
Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 219 KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 278
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+ +SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 279 RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 338
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 339 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 398
Query: 684 PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE +H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 399 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 458
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 459 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 518
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 519 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 452 bits (1164), Expect = e-124
Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 227 KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 286
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+ +SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 287 RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 346
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 347 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 406
Query: 684 PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE +H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 407 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 466
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 467 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 526
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 527 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 452 bits (1164), Expect = e-124
Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
Frame = -3
Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
KPK HET + RK +++K++ GFD NDPLRLFL G ETR+LL+A EE EL +I+ L
Sbjct: 216 KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 275
Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
RLE+ K +LQSQF REPTL+ +SC L+S LH GN SREK+ AN RLVVHVAK
Sbjct: 276 RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 335
Query: 864 QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 336 QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 395
Query: 684 PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
PEN+Y+LL +V AK LYIQE +H P E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 396 PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 455
Query: 507 ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 456 ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 515
Query: 327 LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
LS++G++FG++KERVRQLESRAL +L++ L + YA LLI
Sbjct: 516 LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 558
>ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phaseolus vulgaris]
gi|561036230|gb|ESW34760.1| hypothetical protein
PHAVU_001G178600g [Phaseolus vulgaris]
Length = 550
Score = 451 bits (1159), Expect = e-124
Identities = 221/331 (66%), Positives = 273/331 (82%), Gaps = 1/331 (0%)
Frame = -3
Query: 1188 RKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQ 1009
RK+ +++K+N GFDQNDPLR+FLS E+RQLL+ +EE +L +++ L+RLEEVK+RLQSQ
Sbjct: 220 RKLRLEKKLNEGFDQNDPLRMFLSDPESRQLLTREEESQLITQLQDLSRLEEVKIRLQSQ 279
Query: 1008 FNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDL 829
REPTL EWAD G+SC LQ+ LH NRS+EK+ AN R+VVH+AK YQGRGLNLQDL
Sbjct: 280 IRREPTLAEWADVLGLSCCALQTQLHCANRSKEKLFHANMRMVVHIAKYYQGRGLNLQDL 339
Query: 828 MQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVK 649
+QEGS GL+KSI+KFKP GCRF TYAYWWIR SIR+AIF +SRTIR+PEN+Y LL +V
Sbjct: 340 LQEGSTGLLKSIDKFKPGGGCRFGTYAYWWIRHSIRRAIFLHSRTIRVPENLYRLLGKVL 399
Query: 648 NAKNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITA 472
AK +IQE + HP+ EELA RVGI V+KLE+LLF++R P+SMQQ VWADQ TTFQEITA
Sbjct: 400 EAKKSFIQEGNIHPSKEELARRVGITVDKLENLLFTSRNPISMQQSVWADQETTFQEITA 459
Query: 471 DSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITK 292
DS +EIP++ V+K+LMR HVHNLL++L PKE+ I+RLRFGIEDG+ K+LS IG VFG+TK
Sbjct: 460 DSAIEIPDVCVSKQLMRRHVHNLLNMLSPKEKSILRLRFGIEDGKEKTLSDIGKVFGLTK 519
Query: 291 ERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
ERVRQLESRAL KL+ CL +GL +Y LLI
Sbjct: 520 ERVRQLESRALSKLKDCLESQGLDSYIDLLI 550
>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 554
Score = 446 bits (1146), Expect = e-122
Identities = 222/337 (65%), Positives = 272/337 (80%), Gaps = 1/337 (0%)
Frame = -3
Query: 1206 HETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVK 1027
+E S D++RK G + NDPLRLFL G ETRQLL+ KEE EL ++ + +LE VK
Sbjct: 218 YENSSSNSSDLRRKYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAVK 277
Query: 1026 VRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRG 847
RLQSQF REPTL+EWA+A G+SC +LQS L G SREK+ +N R+VVH+AKQYQGRG
Sbjct: 278 SRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVHIAKQYQGRG 337
Query: 846 LNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYS 667
L LQDL+QEGSMGLMKS+EKFKPQAGCRF+TYAYWW+RQ+IRKAIFQ+SRTIRLPENVY+
Sbjct: 338 LGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVYT 397
Query: 666 LLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTT 490
LL +V AK YIQE +P+ EELA RVG+ VEKL LL+ TRMP+SMQQ VWADQ+TT
Sbjct: 398 LLGKVLEAKKSYIQEGNQNPSREELARRVGMSVEKLGKLLYCTRMPVSMQQTVWADQDTT 457
Query: 489 FQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGS 310
FQE+TAD+G+EIP+L V K+LMR HV NLL L +ER+IIRLR+GIEDG+ +SL++IG
Sbjct: 458 FQEVTADTGIEIPDLSVAKQLMRQHVRNLLHTLEKRERQIIRLRYGIEDGKQRSLTEIGE 517
Query: 309 VFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
+FG++KERVRQLESRA KL++ L +GLGAYA LL+
Sbjct: 518 IFGLSKERVRQLESRAFLKLKESLGSQGLGAYAPLLV 554
>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max]
Length = 575
Score = 442 bits (1138), Expect = e-121
Identities = 227/350 (64%), Positives = 273/350 (78%), Gaps = 7/350 (2%)
Frame = -3
Query: 1227 PKPKAIVHETPSLRKVDIQRKI------NMGFDQNDPLRLFLSGSETRQLLSAKEERELF 1066
PK K I ET RK D Q K+ N DQ+DPLRLFL G ET+QLL+ ++E +L
Sbjct: 226 PKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQDDPLRLFLWGPETKQLLTLEQESQLI 285
Query: 1065 VEIKALTRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFR 886
+I+ L RLEEVK LQSQF REPT+ EWA+ G++C +LQS LH GNRSREK+ AN R
Sbjct: 286 SQIQDLLRLEEVKTNLQSQFGREPTMAEWAEGAGLNCRLLQSQLHSGNRSREKLIQANLR 345
Query: 885 LVVHVAKQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQ 706
+VVHVAK YQGRGL+LQDL+QEGSMGLMKS+EKF P AG RF YA+WWIRQ+IRKA+F+
Sbjct: 346 MVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFR 405
Query: 705 NSRTIRLPENVYSLLRQVKNAKNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPL 529
+SRTIRLPE V+ LL +V AK LYIQE + HPT EELA RVG+ VEK++ LLFS R+P+
Sbjct: 406 HSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPI 465
Query: 528 SMQQPVWADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGI 349
SMQQ VWADQNTTFQEITAD VE ++ V K+LMR HV N+LS+L PKERRIIRLR+G
Sbjct: 466 SMQQTVWADQNTTFQEITADPTVEATDVTVEKQLMRRHVLNVLSVLHPKERRIIRLRYGF 525
Query: 348 EDGEPKSLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
EDGE KSLS+IG +FG++KERVRQLE RAL KL+KCL ++GL AY LL+
Sbjct: 526 EDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 575
>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
Length = 559
Score = 437 bits (1123), Expect = e-120
Identities = 219/344 (63%), Positives = 275/344 (79%), Gaps = 1/344 (0%)
Frame = -3
Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
PKP+ E RK++ +K + G+D NDPLRLFL G ET QLLSAKEE +L +I+ L
Sbjct: 216 PKPQLEDQEMNHRRKLEPHKKSSEGYDPNDPLRLFLWGPETTQLLSAKEEADLIAKIQEL 275
Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
+L+EV+ RLQ+QF+REPTLVEWA A G+S LQ ++ GN SREK+ ANFRLVV++A
Sbjct: 276 MKLQEVRSRLQTQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVYIA 335
Query: 867 KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
KQYQGRGLNLQDL+Q GSMGLMKS+EKFKP GCRF+TYAYWWIRQSIRK++FQ+SRTIR
Sbjct: 336 KQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRTIR 395
Query: 687 LPENVYSLLRQVKNAKNLYI-QERHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
LPENVY+LL +V AK I Q H PT E++A G+ VEKL+ LL+++R+PLSMQ+PV
Sbjct: 396 LPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPV 455
Query: 510 WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
W DQ+TTFQEITAD+ VE P++ +K++MR H NLLS+L P+ER+IIRLRFGIEDGE K
Sbjct: 456 WMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQK 515
Query: 330 SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
SLS IG+ FG++KER+RQ+ESRAL KL++CLS GL AYA +L+
Sbjct: 516 SLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSAYAEMLV 559
>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Cucumis sativus] gi|449482444|ref|XP_004156283.1|
PREDICTED: RNA polymerase sigma factor sigF,
chloroplastic-like [Cucumis sativus]
Length = 562
Score = 437 bits (1123), Expect = e-120
Identities = 219/343 (63%), Positives = 274/343 (79%), Gaps = 1/343 (0%)
Frame = -3
Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
PK + E + R D +RK + FD NDPLRLFL G ET++LL+A+EE EL V+I+ L
Sbjct: 219 PKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDL 278
Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
L+ VK RLQSQF+REPTLVEWA+A G++C LQS LH+ SREK+ AN R+VVH+A
Sbjct: 279 MILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA 338
Query: 867 KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
KQYQGRGL+L DL+Q GS+GLMKS+EKFKPQAGCRF +YAYWWIR SI KAIFQ+SRTIR
Sbjct: 339 KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIR 398
Query: 687 LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
LPENVY+LL +V AKN +++ + P+ EELA RVGI VE+ + L+F +R+P S+QQPV
Sbjct: 399 LPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPV 458
Query: 510 WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
WADQ TTFQEITADS V+ P++ V ++LMR H+ NLLSIL PKERRIIRLRFGIEDG K
Sbjct: 459 WADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREK 518
Query: 330 SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLL 202
+L +IG++FG++KERVRQLE+RAL KL++C + +GLGAYA LL
Sbjct: 519 TLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL 561