BLASTX nr result
ID: Sinomenium22_contig00019209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00019209
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320901.2| hypothetical protein POPTR_0014s10150g [Popu... 107 1e-21
emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera] 104 1e-20
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 102 4e-20
emb|CBI38715.3| unnamed protein product [Vitis vinifera] 99 5e-19
ref|XP_007051427.1| Pentatricopeptide repeat-containing protein,... 99 6e-19
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ... 97 2e-18
ref|XP_007219416.1| hypothetical protein PRUPE_ppa021922mg [Prun... 97 2e-18
ref|XP_002515077.1| pentatricopeptide repeat-containing protein,... 92 6e-17
ref|XP_004494974.1| PREDICTED: conserved oligomeric Golgi comple... 92 7e-17
ref|XP_006491485.1| PREDICTED: conserved oligomeric Golgi comple... 92 1e-16
gb|AHB18410.1| pentatricopeptide repeat-containing protein [Goss... 90 3e-16
ref|XP_007139019.1| hypothetical protein PHAVU_009G258200g, part... 87 2e-15
ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
gb|EYU43069.1| hypothetical protein MIMGU_mgv1a025889mg, partial... 86 7e-15
ref|XP_006605274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 84 3e-14
ref|XP_002872894.1| pentatricopeptide repeat-containing protein ... 83 5e-14
ref|NP_001154199.1| uncharacterized protein [Arabidopsis thalian... 82 6e-14
gb|AAC19289.1| contains similarity to Arabidopsis membrane-assoc... 77 2e-12
emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana] 77 2e-12
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ... 70 3e-10
>ref|XP_002320901.2| hypothetical protein POPTR_0014s10150g [Populus trichocarpa]
gi|550323886|gb|EEE99216.2| hypothetical protein
POPTR_0014s10150g [Populus trichocarpa]
Length = 475
Score = 107 bits (268), Expect = 1e-21
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG++EEA V+E++LKHG+APHTETWV ++ RIC+ D+ + ILDK+ K E+ D
Sbjct: 391 FCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVELKGD 450
Query: 235 SRIVDVGRGLEEYLYKKLQAKAWK 164
+RIV+ G GLEEYL K+ Q KAW+
Sbjct: 451 TRIVEAGIGLEEYLIKRTQQKAWR 474
>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 104 bits (259), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG++EEA EVL +ML+HG+A HTETWVAI+PRIC+ D+ + +E+I D+ LK EI +
Sbjct: 338 FCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLEITPN 397
Query: 235 SRIVDVGRGLEEYLYKKLQAKAWK 164
+R+V+ G GLEEY+ +K++ K+ K
Sbjct: 398 TRLVEAGIGLEEYVIRKVRDKSRK 421
>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 102 bits (255), Expect = 4e-20
Identities = 45/74 (60%), Positives = 62/74 (83%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG++EEA EVL +ML+HG+APHTETWVAI+PRIC+ D+ + +E+I D+ LK EI +
Sbjct: 295 FCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMENIFDEALKLEITPN 354
Query: 235 SRIVDVGRGLEEYL 194
+R+V+ G GLEEY+
Sbjct: 355 TRLVEAGIGLEEYM 368
>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 99.4 bits (246), Expect = 5e-19
Identities = 44/72 (61%), Positives = 60/72 (83%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG++EEA EVL +ML+HG+APHTETWVAI+PRIC+ D+ + +E+I D+ LK EI +
Sbjct: 311 FCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMENIFDEALKLEITPN 370
Query: 235 SRIVDVGRGLEE 200
+R+V+ G GLEE
Sbjct: 371 TRLVEAGIGLEE 382
>ref|XP_007051427.1| Pentatricopeptide repeat-containing protein, mitochondrial
[Theobroma cacao] gi|508703688|gb|EOX95584.1|
Pentatricopeptide repeat-containing protein,
mitochondrial [Theobroma cacao]
Length = 461
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/82 (52%), Positives = 64/82 (78%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG++EEA V +MLK+G+ PH +TWV I+PRIC+ ET + IL++++K EI RD
Sbjct: 377 FCNVGKIEEAIGVFGEMLKYGEVPHMDTWVLIIPRICEDYETERMGEILEEVMKVEIKRD 436
Query: 235 SRIVDVGRGLEEYLYKKLQAKA 170
+RIVD G GLE+YL +K+++++
Sbjct: 437 TRIVDAGTGLEDYLIRKIRSRS 458
>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 451
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/82 (51%), Positives = 65/82 (79%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVGR+EEA VL + L+H +APH +TW+ I+P+IC+ D+ + ++ +L+++LK EI D
Sbjct: 367 FCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLKIEIKGD 426
Query: 235 SRIVDVGRGLEEYLYKKLQAKA 170
+RIVD G GLE+YL +K++AK+
Sbjct: 427 TRIVDAGIGLEDYLIRKIRAKS 448
>ref|XP_007219416.1| hypothetical protein PRUPE_ppa021922mg [Prunus persica]
gi|462415878|gb|EMJ20615.1| hypothetical protein
PRUPE_ppa021922mg [Prunus persica]
Length = 465
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/81 (55%), Positives = 62/81 (76%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVGRVEEA VLE++LKHG+ PHT+TW+ I+P IC+ E +E IL +++K EI +
Sbjct: 380 FCNVGRVEEAFAVLEEVLKHGEVPHTDTWLTIVPGICEEIELERLEEILREVMKVEIRPN 439
Query: 235 SRIVDVGRGLEEYLYKKLQAK 173
+RIV+ GLE+YL KK++AK
Sbjct: 440 TRIVEAAIGLEDYLIKKIRAK 460
>ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545557|gb|EEF47061.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 262
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC VG++EEA V+E +LKHG+ PH +TW+ ILPRIC+ D+ + LDK + EI D
Sbjct: 179 FCIVGKIEEACGVVEVLLKHGEVPHADTWIIILPRICEVDDLEGIRQSLDKAMMVEIMGD 238
Query: 235 SRIVDVGRGLEEYLYKKLQAKAWK 164
+RIV+ G GLE+YL KK Q K W+
Sbjct: 239 TRIVEAGIGLEDYLIKKAQPK-WR 261
>ref|XP_004494974.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Cicer
arietinum]
Length = 1302
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/81 (48%), Positives = 63/81 (77%)
Frame = -1
Query: 412 CNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRDS 233
CN+GR+EEA VL + L+H +APHT+TW+ ++P+IC+ D+ + + +L+++LK EI +
Sbjct: 358 CNIGRIEEACGVLTKSLEHREAPHTDTWMIVVPQICEVDDGLKIGGVLEEVLKIEIKGHT 417
Query: 232 RIVDVGRGLEEYLYKKLQAKA 170
RIVD G GLE+YL +K++AK+
Sbjct: 418 RIVDAGIGLEDYLIRKIRAKS 438
>ref|XP_006491485.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Citrus sinensis]
Length = 1352
Score = 91.7 bits (226), Expect = 1e-16
Identities = 42/81 (51%), Positives = 62/81 (76%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVG+V+EA VLE++LK G+APH +TWV I+P+IC G+E + +L++I+K EI D
Sbjct: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
Query: 235 SRIVDVGRGLEEYLYKKLQAK 173
+RIV+ G GLE+YL K +++
Sbjct: 446 TRIVEAGIGLEDYLIGKTRSR 466
>gb|AHB18410.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 458
Score = 90.1 bits (222), Expect = 3e-16
Identities = 39/82 (47%), Positives = 63/82 (76%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+VG+++ A EVL +ML++ + PHT+TW I+P IC+ ET +E IL++++K EI RD
Sbjct: 376 FCSVGKIDAATEVLGEMLEYREVPHTDTWGTIVPTICEDYETEKMEEILEEVMKIEIKRD 435
Query: 235 SRIVDVGRGLEEYLYKKLQAKA 170
+RIV+ G GLE+YL +K++ ++
Sbjct: 436 TRIVEAGIGLEDYLIRKIRNRS 457
>ref|XP_007139019.1| hypothetical protein PHAVU_009G258200g, partial [Phaseolus
vulgaris] gi|561012106|gb|ESW11013.1| hypothetical
protein PHAVU_009G258200g, partial [Phaseolus vulgaris]
Length = 418
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVGR E+A VL L+HG+APH +TW+ ++P IC+ D+ + L+++LK EI
Sbjct: 334 FCNVGRAEDACGVLTMSLEHGEAPHVDTWMVLMPVICEVDDGGKISGALEEVLKIEIKGH 393
Query: 235 SRIVDVGRGLEEYLYKKLQAKA 170
+RIVD G GLE YL KK++A +
Sbjct: 394 TRIVDAGIGLENYLIKKIRANS 415
>ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
F ++GR+ E+ VLE MLK G APH++TW I+ IC+ ++T + +KILKK++ RD
Sbjct: 397 FHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGICEVEDTAKFCEVWEKILKKDVRRD 456
Query: 235 SRIVDVGRGLEEYLYKKLQA 176
+RIV+ G GL EYL +KLQA
Sbjct: 457 TRIVEAGTGLGEYLIRKLQA 476
>gb|EYU43069.1| hypothetical protein MIMGU_mgv1a025889mg, partial [Mimulus
guttatus]
Length = 458
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC +G++E+A EVL ++L HG++PHT+TW IL +C+ T + +L ++LK EI +
Sbjct: 351 FCRIGKIEDACEVLCELLGHGNSPHTDTWAEILHTVCEEYNTEAMGDVLKQVLKVEIKPN 410
Query: 235 SRIVDVGRGLEEYLYKKLQAK 173
+RIVDVG LEEYL KK++ +
Sbjct: 411 TRIVDVGAALEEYLTKKIKTR 431
>ref|XP_006605274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g01400, mitochondrial-like, partial [Glycine
max]
Length = 403
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FCNVGR E+A VL + L+HG+APH +TW+ I+P IC+ D+ L+++LK EI
Sbjct: 319 FCNVGRTEDACGVLTKALEHGEAPHVDTWMIIMPVICEVDDEGKSSGALEEVLKIEIKGH 378
Query: 235 SRIVDVGRGLEEYLYKKLQAKA 170
+RIVD G GLE YL K+++++
Sbjct: 379 TRIVDAGIGLENYLIGKIRSRS 400
>ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318731|gb|EFH49153.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1162
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/81 (48%), Positives = 57/81 (70%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+ G+VEEA +V+E ++K+G+ H++TW I+P IC DE+ ++ L+ +K+EI D
Sbjct: 337 FCSFGKVEEACDVVEVVMKNGEILHSDTWEMIIPLICKEDESEKIKRFLEDAVKEEITGD 396
Query: 235 SRIVDVGRGLEEYLYKKLQAK 173
+RIVDVG GL YL KLQ K
Sbjct: 397 TRIVDVGIGLGSYLSSKLQMK 417
>ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein
AT4G01400 [Arabidopsis thaliana]
Length = 466
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+ G+VEEA +V+E ++K+G+ H++TW ++P IC+ DE+ ++ L+ +K+EI D
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
Query: 235 SRIVDVGRGLEEYLYKKLQAK 173
+RIVDVG GL YL KLQ K
Sbjct: 435 TRIVDVGIGLGSYLSSKLQMK 455
>gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+ G+VEEA +V+E ++K+G+ H++TW ++P IC+ DE+ ++ L+ +K+EI D
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
Query: 235 SRIVDVGRGLEEYLYK 188
+RIVDVG GL YL K
Sbjct: 435 TRIVDVGIGLGSYLSK 450
>emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
Length = 1117
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+ G+VEEA +V+E ++K+G+ H++TW ++P IC+ DE+ ++ L+ +K+EI D
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Query: 235 SRIVDVGRGLEEYLYK 188
+RIVDVG GL YL K
Sbjct: 361 TRIVDVGIGLGSYLSK 376
>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
gi|332656619|gb|AEE82019.1| uncharacterized protein
AT4G01400 [Arabidopsis thaliana]
Length = 1110
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/67 (44%), Positives = 50/67 (74%)
Frame = -1
Query: 415 FCNVGRVEEAGEVLEQMLKHGDAPHTETWVAILPRICDGDETILVEHILDKILKKEINRD 236
FC+ G+VEEA +V+E ++K+G+ H++TW ++P IC+ DE+ ++ L+ +K+EI D
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Query: 235 SRIVDVG 215
+RIVDVG
Sbjct: 361 TRIVDVG 367