BLASTX nr result
ID: Sinomenium22_contig00018620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00018620
(981 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 337 3e-90
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr... 337 6e-90
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi... 333 6e-89
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 327 5e-87
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 326 1e-86
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 323 5e-86
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi... 316 1e-83
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam... 316 1e-83
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 313 7e-83
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 306 8e-81
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi... 295 2e-77
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi... 294 3e-77
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas... 293 9e-77
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus... 285 2e-74
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi... 279 1e-72
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 277 5e-72
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar... 275 3e-71
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr... 272 2e-70
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ... 268 2e-69
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps... 260 7e-67
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 337 bits (865), Expect = 3e-90
Identities = 183/349 (52%), Positives = 231/349 (66%), Gaps = 23/349 (6%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
I+MYANCGFL F E FD VAWNSMIMGLAK G+VDESR+LFD+M ++TV+WN
Sbjct: 167 IYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWN 226
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI GYVRNGRL+EA DLF QMQ + I P+EF + SLL A LGAL+QGEWI Y RK+
Sbjct: 227 SMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKN 286
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
E+N IV +I++ YCKCGS+ +AFQVF AP KGLS+WN+MI+GLA+NG EAI+LF
Sbjct: 287 NFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLF 346
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
SRL+ S +PDDV+F+GVLT+ N+ G+V +A++YF +M+K KI+P+IKHYSCMVD LGR
Sbjct: 347 SRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGR 406
Query: 704 AGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMYFCHA 883
AG LEEAE I NM N + + W + S C V+ A H
Sbjct: 407 AGLLEEAEELIRNMPV-------------NPDAIIW-SSLLSACRKHGNVELAKRAAKHI 452
Query: 884 -----------------YRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
Y +S +FE+ M RL ++ + KEPGCSLIE
Sbjct: 453 VDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIE 501
Score = 67.4 bits (163), Expect = 8e-09
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Frame = +2
Query: 98 GQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQN-Q*IHPTEFALASL 274
G ++ + +F ++ S + +WN++I G+ ++ A LF M + P S+
Sbjct: 72 GDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSV 131
Query: 275 LTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGL 454
A LG G + K ++ + + I+ Y CG + + ++ F + +
Sbjct: 132 FKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDI 191
Query: 455 STWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLV 634
WNSMI+GLA G+ +E+ +LF + L + VS+ +++ G + EA F
Sbjct: 192 VAWNSMIMGLAKCGEVDESRKLFDEMPLRNT----VSWNSMISGYVRNGRLREALDLFGQ 247
Query: 635 MTKICKIKPTIKHYSCMVDALGRAGFLEEAE 727
M + +IKP+ +++A R G L++ E
Sbjct: 248 MQEE-RIKPSEFTMVSLLNASARLGALKQGE 277
>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
gi|557539373|gb|ESR50417.1| hypothetical protein
CICLE_v10031197mg [Citrus clementina]
Length = 534
Score = 337 bits (863), Expect = 6e-90
Identities = 182/338 (53%), Positives = 230/338 (68%), Gaps = 12/338 (3%)
Frame = +2
Query: 2 IFMYANCGFL------FDE-DSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNW 160
I+MYANCGFL FDE D+ FD VAWNSMI+GLAK G++DESRRLFDKM S++TV+W
Sbjct: 162 IYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 221
Query: 161 NSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRK 340
NSMI GYVRN + KEA +LF +MQ Q I P+EF + SLL AC LGA+ QGEWI +
Sbjct: 222 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 281
Query: 341 SKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIEL 520
+ E+N+IV+TAI++ YCKCG ++A QVFN PKKGLS WNSM+ GLA+NG EAI+L
Sbjct: 282 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 341
Query: 521 FSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALG 700
FS LQ S KPD +SFI VLT+ NH G V +A+ YF +MT+ KIKP+IKHYSCMVDALG
Sbjct: 342 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 401
Query: 701 RAGFLEEAEGPIANM---TQTLLHGH--PCFQLV*NMEILRWRNKQQSNCSNWNQVKAAA 865
RAG LEEAE I +M ++ G + N+E+ + KQ
Sbjct: 402 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGY 459
Query: 866 MYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + Y +S +FE+ M RLL ++ + KEPGCSLIE
Sbjct: 460 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 497
>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Citrus sinensis]
Length = 534
Score = 333 bits (854), Expect = 6e-89
Identities = 181/338 (53%), Positives = 228/338 (67%), Gaps = 12/338 (3%)
Frame = +2
Query: 2 IFMYANCGFL------FDE-DSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNW 160
I+MYANCGFL FDE D+ FD VAWNSMI+GLAK G++DESRRLFDKM S++TV+W
Sbjct: 162 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 221
Query: 161 NSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRK 340
NSMI GYVRN + KEA +LF +MQ Q I P+EF + SLL AC LGA+ QGEWI +
Sbjct: 222 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 281
Query: 341 SKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIEL 520
+ E+N+IV+TAI++ YCKCG ++A QVFN PKKGLS WNSM+ GLA+NG EAI+L
Sbjct: 282 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 341
Query: 521 FSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALG 700
FS LQ S PD SFI VLT+ NH G V +A+ YF +MT+ KIKP+IKHYSCMVDALG
Sbjct: 342 FSGLQSSNLTPDYTSFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 401
Query: 701 RAGFLEEAEGPIANM---TQTLLHGH--PCFQLV*NMEILRWRNKQQSNCSNWNQVKAAA 865
RAG LEEAE I +M ++ G + N+E+ + KQ
Sbjct: 402 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGY 459
Query: 866 MYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + Y +S +FE+ M RLL ++ + KEPGCSLIE
Sbjct: 460 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 497
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 327 bits (838), Expect = 5e-87
Identities = 174/336 (51%), Positives = 228/336 (67%), Gaps = 12/336 (3%)
Frame = +2
Query: 8 MYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWNSM 169
MY NCGFL FD + FD V WN+MI+GLAK G++D+SRRLFDKM ++TV+WNSM
Sbjct: 141 MYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSM 200
Query: 170 IGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKI 349
I GYVR GR EA +LF +MQ + I P+EF + SLL AC LGAL QGEWI Y K+
Sbjct: 201 ISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNF 260
Query: 350 EVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSR 529
+NSIV+TAI++ Y KCGS+DKA QVF APKKGLS WNS+I+GLA++G+G EA+ LFS+
Sbjct: 261 ALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRLFSK 320
Query: 530 LQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAG 709
L+ S KPD VSFIGVLT+ NH GMV A+ YFL+M++ KI+P+IKHYSCMVD LGRAG
Sbjct: 321 LESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAG 380
Query: 710 FLEEAEGPIANM---TQTLLHG---HPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMY 871
LEEAE I +M ++ G C + N+E+ + K+ + ++ +
Sbjct: 381 LLEEAEELIKSMPVNPDAIIWGSLLSSCREYG-NIEMAKQAAKRVNELD--PNESSSFIL 437
Query: 872 FCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ Y + FE+ + RL ++ + KEPGCSLIE
Sbjct: 438 LSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIE 473
Score = 69.7 bits (169), Expect = 2e-09
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 35/245 (14%)
Frame = +2
Query: 95 SGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQ--NQ*IHPTEFALA 268
+G ++ + +F ++ + + WN++I G+ ++ A LF M + P
Sbjct: 42 AGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYP 101
Query: 269 SLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKK 448
S+ A LG +G + K +E + + I+ Y CG + +A ++F+ A
Sbjct: 102 SVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGF 161
Query: 449 GLSTWNSMIIGLAINGQGE-------------------------------EAIELFSRLQ 535
+ TWN+MIIGLA G+ + EA+ELFSR+Q
Sbjct: 162 DVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQ 221
Query: 536 LSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKH--YSCMVDALGRAG 709
G KP + + + +L N C +G R+ + I K + + ++D + G
Sbjct: 222 EEGIKPSEFTMVSLL---NACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCG 278
Query: 710 FLEEA 724
+++A
Sbjct: 279 SIDKA 283
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 326 bits (835), Expect = 1e-86
Identities = 179/348 (51%), Positives = 224/348 (64%), Gaps = 22/348 (6%)
Frame = +2
Query: 2 IFMYANCGF------LFDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
+FMY NCGF +FD FD VAWN+MIMG+AK G VDESRRLFDKM ++ V+WN
Sbjct: 164 LFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWN 223
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI GYVRNGR +A +LF +MQ + I P+EF + SLL AC LGA+ QGEWI Y K
Sbjct: 224 SMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKK 283
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
K E+N IV+TAI++ Y KCGS+DKA QVF AP++GLS WNSMI+GLA+NGQ EA++LF
Sbjct: 284 KFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLF 343
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
S LQ S +PDDVSFI VLT+ +H GMV +A+ YFL+M KIKP IKH+SCMVD LGR
Sbjct: 344 SVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGR 403
Query: 704 AGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNC--SNWNQVKAAAMYF- 874
AG LEEAE I +M H P + + W + S C N K AA +
Sbjct: 404 AGLLEEAEELIRSM-----HVDP--------DAIIWGSLLWSCCKYGNIKMAKRAANHLI 450
Query: 875 -------------CHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+AY ++ FE+ + RL ++ + KEPGCS IE
Sbjct: 451 ELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIE 498
Score = 59.7 bits (143), Expect = 2e-06
Identities = 48/246 (19%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Frame = +2
Query: 95 SGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQ-NQ*IHPTEFALAS 271
+G ++ + +F ++++ + WN++I G+ R+ + + L+ M + P S
Sbjct: 68 AGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPS 127
Query: 272 LLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKG 451
+ A L +G + K +E +S + I+ Y CG +A +VF+
Sbjct: 128 VFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFD 187
Query: 452 LSTWNSMIIGLA-------------------------------INGQGEEAIELFSRLQL 538
+ WN+MI+G+A NG+ +A+ELF ++Q+
Sbjct: 188 IVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQV 247
Query: 539 SGSKPDDVSFIGVLTSGNHCGMVGEARK----YFLVMTKICKIKPTIKHYSCMVDALGRA 706
+P + + + +L N C +G R+ + ++ K ++ P + + ++D +
Sbjct: 248 ERIEPSEFTMVSLL---NACACLGAIRQGEWIHDYMVKKKFELNPIV--VTAIIDMYSKC 302
Query: 707 GFLEEA 724
G +++A
Sbjct: 303 GSIDKA 308
>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 550
Score = 323 bits (829), Expect = 5e-86
Identities = 180/349 (51%), Positives = 222/349 (63%), Gaps = 23/349 (6%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
I MY+NCG L FDED FD VAWNSMIMGL+K G+V ESRRLFDKM +++++WN
Sbjct: 163 IHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWN 222
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMIGG VRNG EA DLF +MQ Q I P+EF + SLL A LGA+ QGEWI Y RK+
Sbjct: 223 SMIGGSVRNGMYTEALDLFGEMQKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRKN 282
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
I++N IV+TAI+ Y KCGS++KA VF AP+ GLS WNS+I+GLA NG EEAIELF
Sbjct: 283 HIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPRTGLSCWNSIIMGLATNGCEEEAIELF 342
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
SRL+ S PDDVSF+GVLT+ +H GMV +ARKYF VM + +I P+IKHYSCMVD LGR
Sbjct: 343 SRLKSSSFVPDDVSFLGVLTACSHSGMVEKARKYFSVMRETYRIAPSIKHYSCMVDVLGR 402
Query: 704 AGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMYFCHA 883
AG LEEAE L+ G P + + W S+C ++ A H
Sbjct: 403 AGLLEEAE--------KLIDGMPL-----KADAIIW-GSLLSSCRKHRDIEMAKRAAKHV 448
Query: 884 -----------------YRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
Y +S++FE+ M RL + + KEPGCSLIE
Sbjct: 449 IELDPSDCCGYVLMSNVYAASSQFEEAMRERLSMKGQKIEKEPGCSLIE 497
Score = 69.7 bits (169), Expect = 2e-09
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Frame = +2
Query: 53 DAVAWNSMIMGLAK-SGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQM 229
D VA + ++ A +G ++ + +F + + + WN++I G+ + + A LF M
Sbjct: 52 DTVAASRVLAFCASPAGDINYAYMVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDM 111
Query: 230 Q-NQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGS 406
+ P S+ A LG G + K +E + V I+ Y CG
Sbjct: 112 LVTSTVQPQRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGL 171
Query: 407 VDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVLTS 586
+ +A +VF++ + + WNSMI+GL+ G+ E+ LF ++ S +S+ ++
Sbjct: 172 LSEARRVFDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNS----ISWNSMIGG 227
Query: 587 GNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFLEEAE 727
GM EA F M K KIKP+ +++A + G + + E
Sbjct: 228 SVRNGMYTEALDLFGEMQK-QKIKPSEFTMVSLLNASAQLGAIRQGE 273
>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum tuberosum]
Length = 522
Score = 316 bits (809), Expect = 1e-83
Identities = 169/345 (48%), Positives = 226/345 (65%), Gaps = 19/345 (5%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
++MYA+CGFL FDED D V+WNSMIMGLAKSG++D+S RLF KM +++ V+WN
Sbjct: 162 LYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWN 221
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI G+VRNG+ EA +LF MQ + I P+EF L SLL ACG LGALEQG WI Y +K+
Sbjct: 222 SMISGFVRNGKWNEALELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKN 281
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+E+N IV+TAI++ YCKCG+V+ A+ VF KGLS+WNSMI+GLA NG ++AI+LF
Sbjct: 282 NVELNVIVVTAIIDMYCKCGNVEMAWHVFISISNKGLSSWNSMILGLATNGFEDDAIKLF 341
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
+RLQ S KPD VSFIGVLT+ NH G+V +A+ YF +M K I+P+IKHY CMVD LGR
Sbjct: 342 ARLQCSILKPDSVSFIGVLTACNHSGLVDKAKDYFQLMKKEYGIEPSIKHYGCMVDILGR 401
Query: 704 AGFLEEAEGPIANMTQ--------TLL-----HGHPCFQLV*NMEILRWRNKQQSNCSNW 844
AG +EEA+ I +M +LL HG NME+ RW +
Sbjct: 402 AGLVEEADEVIRSMKMEPDAVIWCSLLSACRSHG--------NMELARWSAENLLELD-- 451
Query: 845 NQVKAAAMYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + + Y +S +F + ++ R+ + + KEPGCS +E
Sbjct: 452 PNESSGYVLMANMYAASGQFAEAIDERISMKDKHIAKEPGCSSVE 496
Score = 77.8 bits (190), Expect = 6e-12
Identities = 58/227 (25%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Frame = +2
Query: 53 DAVAWNSMIMGLAKS---GQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFF 223
D +A + ++ AKS G ++ + +F +E+ + WN++I G+ + + A LF
Sbjct: 49 DKIASSRVLAFSAKSPPIGDINYANLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFI 108
Query: 224 QM-QNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKC 400
+M N + P S+ A G ++ G + K +E ++ + ++ Y C
Sbjct: 109 EMLNNSQVQPHLLTYPSVFKAYARGGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASC 168
Query: 401 GSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVL 580
G + +A ++F++ + + +WNSMI+GLA +G+ +++ LFS++ S +DVS+ ++
Sbjct: 169 GFLVEARKLFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKM----STRNDVSWNSMI 224
Query: 581 TSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFLEE 721
+ G EA + F M + IKP+ +++A G G LE+
Sbjct: 225 SGFVRNGKWNEALELFSTMQEE-NIKPSEFTLVSLLNACGHLGALEQ 270
>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 538
Score = 316 bits (809), Expect = 1e-83
Identities = 177/350 (50%), Positives = 223/350 (63%), Gaps = 24/350 (6%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDS-SFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNW 160
I+MYANCG L FDE+ D VAWNSMI+GLAK G+VDESRRLF+KM S++TV+W
Sbjct: 164 IYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSW 223
Query: 161 NSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRK 340
NSMI GYVRNGR EA +LF +MQ + I P+EF + SLL AC LGA+ QG+WI Y K
Sbjct: 224 NSMISGYVRNGRFLEALELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIHDYILK 283
Query: 341 SKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIEL 520
E+N IV+TAI++ YCKCG+ +KA QVF +PK+GLS WNSMI+GLA NG EA +L
Sbjct: 284 QNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGLSCWNSMILGLATNGCENEARQL 343
Query: 521 FSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALG 700
FS+L+ KPD V+FIGVL + N GMV +A+ YF +MT+ KIKPTIKHYSCMVD LG
Sbjct: 344 FSKLESLSLKPDHVTFIGVLMACNSAGMVDKAKYYFSLMTEKYKIKPTIKHYSCMVDVLG 403
Query: 701 RAGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNC---SNWNQVKAAA-- 865
AG LEEAE I +M N + + W S C N K AA
Sbjct: 404 NAGLLEEAEQLIRSMPV-------------NEDAIIW-GSLLSACRKHGNVGMAKRAAKL 449
Query: 866 ------------MYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + Y ++ +FE+ + RL ++ L+KEPGCSLIE
Sbjct: 450 VIELDPAERSGYVLMSNVYAATRQFEEAIKQRLSMKEKQLQKEPGCSLIE 499
>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum lycopersicum]
Length = 522
Score = 313 bits (802), Expect = 7e-83
Identities = 167/345 (48%), Positives = 226/345 (65%), Gaps = 19/345 (5%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
++MYA+CGFL FDED D V+WNSMI+GLAKSG++D+S RLF KM +++ V+WN
Sbjct: 162 LYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWN 221
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI G+VRNG+ EA +LF MQ + + P+EF L SLL ACG LGALEQG WI Y +K+
Sbjct: 222 SMISGFVRNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKN 281
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+E+N IV+TAI++ YCKC +V+ A+ VF + KGLS+WNSMI+GLA NG ++AI+LF
Sbjct: 282 NVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFEDDAIKLF 341
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
+RLQ S KPD VSFIGVLT+ NH G+V +A+ YF +M I+P+IKHY CMVD LGR
Sbjct: 342 ARLQCSILKPDSVSFIGVLTACNHSGLVEKAKDYFQLMKMEYGIEPSIKHYGCMVDILGR 401
Query: 704 AGFLEEAEGPIANMTQ--------TLL-----HGHPCFQLV*NMEILRWRNKQQSNCSNW 844
AG +EEAE I +M +LL HG N+E+ RW +
Sbjct: 402 AGLVEEAEEVIRSMKMEPDAVIWGSLLSACRSHG--------NVELARWSAENLLELD-- 451
Query: 845 NQVKAAAMYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + + Y +S F++ MN R+ ++ + KEPGCS +E
Sbjct: 452 PNESSGYVLMANMYAASGLFDEAMNERISMKEKHIAKEPGCSSVE 496
Score = 77.4 bits (189), Expect = 8e-12
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 4/227 (1%)
Frame = +2
Query: 53 DAVAWNSMIMGLAKS---GQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFF 223
D +A + ++ AKS G ++ + +F +E+ + WN++I G+ + + A LF
Sbjct: 49 DKIAASRVLAFSAKSPPIGDINYANLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFI 108
Query: 224 QM-QNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKC 400
+M N + P S+ A G + G + K +E ++ + ++ Y C
Sbjct: 109 EMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASC 168
Query: 401 GSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVL 580
G + +A ++F++ + + +WNSMIIGLA +G+ +++ LFS++ +DVS+ ++
Sbjct: 169 GFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTR----NDVSWNSMI 224
Query: 581 TSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFLEE 721
+ G EA + F M + +KP+ +++A G G LE+
Sbjct: 225 SGFVRNGKWNEALELFSTMQEE-NVKPSEFTLVSLLNACGHLGALEQ 270
>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
gi|587904202|gb|EXB92403.1| hypothetical protein
L484_021387 [Morus notabilis]
Length = 530
Score = 306 bits (784), Expect = 8e-81
Identities = 168/336 (50%), Positives = 220/336 (65%), Gaps = 10/336 (2%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
I MY NCGFL FDE S D VAWNSMIMGL+K G+V ESRRLFD+M +++V+WN
Sbjct: 168 IHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWN 227
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI GYVRNG+ EA +LF +MQ + I +EF + SLL A G LGA+ QGEWI Y K+
Sbjct: 228 SMISGYVRNGKCVEALELFGKMQGEGIKASEFTMVSLLNASGRLGAIRQGEWIHEYITKN 287
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
IE+N IV+TAI++ YCKCGSV+KA VF APK GLS WNSM++GLA+NG EEA+ELF
Sbjct: 288 GIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPKLGLSCWNSMVMGLAMNGCEEEALELF 347
Query: 524 SRLQLS-GSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALG 700
SRL+ S +PD VSF+ VLT+ NH GMV +AR YF +M I+P+ +HYSCMVD LG
Sbjct: 348 SRLESSIDLRPDGVSFLAVLTACNHSGMVDKARDYFSLMRGKYNIEPSTRHYSCMVDVLG 407
Query: 701 RAGFLEEAEGPIANM---TQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMY 871
+AG LEEAE I +M ++ G + I + + +A +
Sbjct: 408 KAGHLEEAEKLILSMPINPDAIIWGSLLSACRKHGNIEMAQRALERVIELDPSESSAYVL 467
Query: 872 FCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ Y SS+ +++ + R+ ++ + KEPGCSLIE
Sbjct: 468 MSNVYGSSSHYDEAVKQRINMKEKRIEKEPGCSLIE 503
Score = 68.6 bits (166), Expect = 4e-09
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Frame = +2
Query: 95 SGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQ-NQ*IHPTEFALAS 271
+G ++ + +F ++++ + WN++I G+ R+ + A LF M + P S
Sbjct: 72 AGNINYALMVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPS 131
Query: 272 LLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKG 451
+ A LG G + K ++ + V I+ Y CG + +A Q+F+++ +
Sbjct: 132 VFKAYAQLGLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELD 191
Query: 452 LSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFL 631
L WNSMI+GL+ G+ E+ LF R+ L S VS+ +++ G EA + F
Sbjct: 192 LVAWNSMIMGLSKCGEVGESRRLFDRMPLRNS----VSWNSMISGYVRNGKCVEALELFG 247
Query: 632 VMTKICKIKPTIKHYSCMVDALGRAGFLEEAE 727
M IK + +++A GR G + + E
Sbjct: 248 KMQGE-GIKASEFTMVSLLNASGRLGAIRQGE 278
>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cicer arietinum]
Length = 536
Score = 295 bits (754), Expect = 2e-77
Identities = 160/337 (47%), Positives = 217/337 (64%), Gaps = 11/337 (3%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSF-DAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNW 160
I+MYAN G L FDE D VA+NSMIMG AK G++DE+R+LFD+M ++++V W
Sbjct: 166 IYMYANSGLLSEAKRVFDEKLELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTW 225
Query: 161 NSMIGGYVRNGRLKEAFDLFFQMQ-NQ*IHPTEFALASLLTACGGLGALEQGEWICAYNR 337
NSMI GYVRNG+L EA +LF +MQ + + P+EF + SLL AC LGAL+ G+W+ Y +
Sbjct: 226 NSMISGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIK 285
Query: 338 KSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIE 517
++ E+N IVLTAI++ YCKCGSV+ A QVF+ P +GLS WNS+IIGLA+NG EA E
Sbjct: 286 RNDFELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGRGLSCWNSIIIGLAMNGHEREAFE 345
Query: 518 LFSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDAL 697
FS L+LS KPD VSFIGVLT+ H G V +A+ YF +M KI+P+IKHY+CMV+ L
Sbjct: 346 FFSELELSKFKPDSVSFIGVLTACKHLGAVDKAKDYFALMMNEYKIEPSIKHYTCMVEVL 405
Query: 698 GRAGFLEEAEGPIANM---TQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAM 868
G+A FLEEAE I M ++ G + + R + Q + +
Sbjct: 406 GQAAFLEEAEELIQGMPIKPDAIIWGSLLSSCRKHGNVQRAKRAAQRVYELNPSDASGYV 465
Query: 869 YFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ Y +S +FE+ + R+L ++ KEPGCS IE
Sbjct: 466 LMSNVYAASNKFEEAVEQRVLMKENLTEKEPGCSSIE 502
Score = 70.5 bits (171), Expect = 1e-09
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Frame = +2
Query: 95 SGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASL 274
SG ++ + +LF +M + + +WN++I + R+ + A LF M I P S+
Sbjct: 71 SGNINYAYKLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQHLTYPSV 130
Query: 275 LTACGGLGALEQGEWICAYNRK-------------------------------SKIEVNS 361
A L A + G + K K+E+
Sbjct: 131 FKAYAQLSAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVFDEKLELGD 190
Query: 362 IV-LTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQL 538
+V +++ + KCG +D+A ++F++ + TWNSMI G NG+ EA+ELF ++QL
Sbjct: 191 VVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLMEALELFHKMQL 250
Query: 539 SGS-KPDDVSFIGVLTSGNHCG 601
+P + + + +L + H G
Sbjct: 251 EERVEPSEFTMVSLLNACAHLG 272
>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 294 bits (753), Expect = 3e-77
Identities = 167/349 (47%), Positives = 215/349 (61%), Gaps = 23/349 (6%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
I+MYAN G L FDE D VA NSMIMGLAK G+VD+SRRLFD M +++ V WN
Sbjct: 166 IYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWN 225
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI GYVRN RL EA +LF +MQ + + P+EF + SLL+AC LGAL+ GEW+ Y ++
Sbjct: 226 SMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRG 285
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
E+N IVLTAI++ YCKCG + KA +VF +P +GLS WNS+IIGLA+NG +AIE F
Sbjct: 286 HFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYF 345
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
S+L+ S KPD VSFIGVLT+ + G VG+AR YF +M +I+P+IKHY+CMV+ LG+
Sbjct: 346 SKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQ 405
Query: 704 AGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQV---KAAAMYF 874
A LEEAE L+ G P + + W S+C V K AA
Sbjct: 406 AALLEEAE--------QLIKGMPL-----KADFIIW-GSLLSSCRKHGNVEIAKRAAQRV 451
Query: 875 CHAYRSSA--------------RFEDTMNLRLLTQKTGLRKEPGCSLIE 979
C S A +FE+ M R+L ++ KEPGCS IE
Sbjct: 452 CELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIE 500
Score = 70.5 bits (171), Expect = 1e-09
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Frame = +2
Query: 89 AKSGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALA 268
+ SG ++ + LF + S + WN++I G+ R+ A LF M + P
Sbjct: 69 SSSGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYP 128
Query: 269 SLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKY------------------- 391
S+ A LGA G + K +E + + I+ Y
Sbjct: 129 SVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDL 188
Query: 392 ------------CKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQ 535
KCG VDK+ ++F++ P + TWNSMI G N + EA+ELF ++Q
Sbjct: 189 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQ 248
Query: 536 LSGSKPDDVSFIGVLTSGNHCG 601
+P + + + +L++ H G
Sbjct: 249 GERVEPSEFTMVSLLSACAHLG 270
>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
gi|561014990|gb|ESW13851.1| hypothetical protein
PHAVU_008G231600g [Phaseolus vulgaris]
Length = 525
Score = 293 bits (749), Expect = 9e-77
Identities = 162/346 (46%), Positives = 221/346 (63%), Gaps = 20/346 (5%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
++MYAN G + FDE D VA NSMIMGLAK G+VD+SRRLFD M +++ V+WN
Sbjct: 164 LYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWN 223
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI GYVRNGRL E +LF +MQ + + P+EF + SLL+AC LGAL+ GEW+ Y ++
Sbjct: 224 SMISGYVRNGRLTEGLELFRKMQEEGVEPSEFTMVSLLSACAHLGALQHGEWVHDYIKRG 283
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
++N IVLTAI++ YCKCGS++KA +VF +P +GL WNS+IIGLA+NG EAIE F
Sbjct: 284 NFKLNVIVLTAIIDMYCKCGSIEKAVEVFAASPTRGLPCWNSIIIGLALNGHEREAIEYF 343
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
S+L+ S KPD VSFIGVLT+ + G V EAR YF +M +I+P+IKHY+C+V+ LG
Sbjct: 344 SKLESSNIKPDCVSFIGVLTACKYLGAVREARDYFALMMDKYEIEPSIKHYTCLVEVLGH 403
Query: 704 AGFLEEAEGPIANMT--------QTLL-----HGHPCFQLV*NMEILRWRNKQQSNCSNW 844
A LEEAE I M+ +LL HG N+EI + +
Sbjct: 404 AALLEEAEEVIKGMSIEADFIIWGSLLSSCRKHG--------NVEIAK---RAAQRVFEL 452
Query: 845 NQVKAAA-MYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
N +A+ + + +S +FE+ + R+L ++ + KEPGCS IE
Sbjct: 453 NPREASGYLLMSNVQAASNQFEEALEHRILMKERLVEKEPGCSSIE 498
Score = 75.5 bits (184), Expect = 3e-11
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Frame = +2
Query: 89 AKSGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALA 268
+ SG ++ + +F + + + WN++I G+ R+ + A LF M + P
Sbjct: 67 SSSGDINYAYLVFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSAVEPQRLTYP 126
Query: 269 SLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKY------------------- 391
S+ A LGA G + K +E + + I+ Y
Sbjct: 127 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLEL 186
Query: 392 ------------CKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQ 535
KCG VDK+ ++F++ P + +WNSMI G NG+ E +ELF ++Q
Sbjct: 187 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKMQ 246
Query: 536 LSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFL 715
G +P + + + +L++ H G + + ++ K K + + ++D + G +
Sbjct: 247 EEGVEPSEFTMVSLLSACAHLGAL-QHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSI 305
Query: 716 EEAEGPIANMTQTLLHGHPCFQLV 787
E+A + + G PC+ +
Sbjct: 306 EKA---VEVFAASPTRGLPCWNSI 326
>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
Length = 505
Score = 285 bits (730), Expect = 2e-74
Identities = 162/345 (46%), Positives = 213/345 (61%), Gaps = 19/345 (5%)
Frame = +2
Query: 2 IFMYANCGF------LFDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
I MYA+CG LFDED D VAWNSM+MGLAK G+VDES RLF K+ ++ ++WN
Sbjct: 149 IHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLAKCGEVDESWRLFCKIPCRNDISWN 208
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
+MI GYVRNG+ +A LF +MQ + I P+EF L S+L AC LGALEQG+WI Y +KS
Sbjct: 209 TMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLVSMLNACAKLGALEQGKWIHRYIKKS 268
Query: 344 ---KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAI 514
I+ N+IV+TAI++ YCKCG + A +VF P+K LS WNSMI+GLA NG EEA
Sbjct: 269 DINNIDRNTIVVTAIIDMYCKCGDIKTAREVFESTPQKALSGWNSMILGLATNGFEEEAF 328
Query: 515 ELFSRL-QLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVD 691
+LF+ L Q S PD VSFIGVLT+ NH V +AR+YF VM + I+PTIKHY C+VD
Sbjct: 329 QLFTELEQSSNLNPDSVSFIGVLTASNHSVRVDKAREYFKVMKETYGIEPTIKHYGCLVD 388
Query: 692 ALGRAGFLEEAEGPIANM---TQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKA- 859
LGRAG +E+A I +M ++ G R R+ + + N + A
Sbjct: 389 VLGRAGLIEQAAEVIKSMPMKPDAIIWGSLL------SACRRCRDVGVAELAARNLLLAG 442
Query: 860 -----AAMYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
A + + Y +S F+ +N R +K + K+PGCS IE
Sbjct: 443 PDETSAHVLMSNVYAASGDFKKAVNERTKMKKKKMEKQPGCSFIE 487
Score = 66.2 bits (160), Expect = 2e-08
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Frame = +2
Query: 53 DAVAWNSMIMGLAKSG---QVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFF 223
D +A + ++ A G +D + +F +E + WN++I G+ ++ A LF
Sbjct: 36 DTIAVSRILAFCAAPGPARDLDYAFSVFSHIEKPNLFTWNTIIRGFCQSSHPHVAISLFV 95
Query: 224 QM-QNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKC 400
M N + P S+ A LG G + K E + + +I+ Y C
Sbjct: 96 DMLTNSTLEPENLTYPSVFKAYTQLGLAGDGAQLHGRIIKLGFEHDPFIRNSIIHMYADC 155
Query: 401 GSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVL 580
G A ++F++ + WNSM++GLA G+ +E+ LF ++ +D+S+ ++
Sbjct: 156 GLFGSARKLFDEDEDTDVVAWNSMVMGLAKCGEVDESWRLFCKIPCR----NDISWNTMI 211
Query: 581 TSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFLEEAE 727
+ G +A F M + +I+P+ M++A + G LE+ +
Sbjct: 212 SGYVRNGKWVDALSLFAEMQQ-RQIRPSEFTLVSMLNACAKLGALEQGK 259
>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 279 bits (714), Expect = 1e-72
Identities = 152/337 (45%), Positives = 212/337 (62%), Gaps = 11/337 (3%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
++MYA GFL F+++ FD V+WNSMI+GLAK G++DESR+LFDKM K+ ++WN
Sbjct: 166 LYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWN 225
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMIGGYVRNG KEA LF +MQ + I P+EF + SLL A +GAL QG WI Y +K+
Sbjct: 226 SMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKN 285
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+++N+IV+TAI++ YCKCGS+ A QVF P + LS+WNSMI GLA+NG +EAI +F
Sbjct: 286 NLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVF 345
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
L+ S KPD +SF+ VLT+ NH MV E ++F M +I+P+IKHY+ MVD + R
Sbjct: 346 KMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISR 405
Query: 704 AGFLEEAEGPIANM---TQTLLHG--HPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAM 868
AGFLEEAE I M ++ G ++ N E+ + ++ + + M
Sbjct: 406 AGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLM 465
Query: 869 YFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
HA+ ++ F M R+ + + KEPG S IE
Sbjct: 466 ANIHAWGNN--FVGAMEKRVAMRMKKVEKEPGGSFIE 500
Score = 67.8 bits (164), Expect = 6e-09
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 GQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQMQ-NQ*IHPTEFALASL 274
G +D + +F +M++ + +WN++I G+ ++ + A LF M + + P S+
Sbjct: 71 GNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSI 130
Query: 275 LTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGL 454
A LG G + K ++ + + I+ Y G + +A ++FN + +
Sbjct: 131 FKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDV 190
Query: 455 STWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLV 634
+WNSMI+GLA G+ +E+ +LF ++ + + +S+ ++ GM EA K F+
Sbjct: 191 VSWNSMILGLAKCGEIDESRKLFDKMPVK----NPISWNSMIGGYVRNGMFKEALKLFIK 246
Query: 635 MTKICKIKPTIKHYSCMVDALGRAGFLEE 721
M + +I+P+ +++A + G L +
Sbjct: 247 MQEE-RIQPSEFTMVSLLNASAQIGALRQ 274
>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 542
Score = 277 bits (708), Expect = 5e-72
Identities = 153/340 (45%), Positives = 211/340 (62%), Gaps = 14/340 (4%)
Frame = +2
Query: 2 IFMYANCGFLFDEDSSFDA----------VAWNSMIMGLAKSGQVDESRRLFDKMESKST 151
I+MYAN G + + FD VA NSMIMG AK G++DESR LFD M ++++
Sbjct: 169 IYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTS 228
Query: 152 VNWNSMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAY 331
V+WNSMI GYVRNG+L EA +LF +MQ + +EF + SLL AC LGAL+ G+W+ Y
Sbjct: 229 VSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDY 288
Query: 332 NRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEA 511
+++ E+N IV+TAI++ YCKCGSV+ A +VF P++GLS WNS+IIGLA+NG EA
Sbjct: 289 IKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREA 348
Query: 512 IELFSRLQLSG-SKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMV 688
E FS+L+ S KPD VSFIGVLT+ H G + +AR YF +M +I+P+IKHY+C+V
Sbjct: 349 FEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIV 408
Query: 689 DALGRAGFLEEAEGPIANM---TQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKA 859
D LG+AG LEEAE I M ++ G + + R Q +
Sbjct: 409 DVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDAS 468
Query: 860 AAMYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ + + +S +FE+ + RLL ++ KEPGCS IE
Sbjct: 469 GYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIE 508
>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein
[Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein
[Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 559
Score = 275 bits (702), Expect = 3e-71
Identities = 153/339 (45%), Positives = 209/339 (61%), Gaps = 13/339 (3%)
Frame = +2
Query: 2 IFMYANCGFLFDEDS------SFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
+ MY CG L + FD VAWNSMIMG AK G +D+++ LFD+M ++ V+WN
Sbjct: 168 LHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWN 227
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI G+VRNGR K+A D+F +MQ + + P F + SLL AC LGA EQG WI Y ++
Sbjct: 228 SMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN 287
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+ E+NSIV+TA+++ YCKCG +++ VF APKK LS WNSMI+GLA NG E A++LF
Sbjct: 288 RFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLF 347
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
S L+ SG +PD VSFIGVLT+ H G V A ++F +M + I+P+IKHY+ MV+ LG
Sbjct: 348 SELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 704 AGFLEEAEGPIANM---TQTLLHGH--PCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAM 868
AG LEEAE I NM T++ + + N+E+ K+ + C
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA----KRAAKCLKKLDPDETCG 463
Query: 869 Y--FCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
Y +AY S FE+ + RLL ++ + KE GCS IE
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
Score = 60.5 bits (145), Expect = 1e-06
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 35/235 (14%)
Frame = +2
Query: 122 LFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQM--QNQ*IHPTEFALASLLTACGGL 295
+F ++ K+ WN++I G+ R+ + A +F M + + P S+ A G L
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 296 GALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMI 475
G G + K +E +S + ++ Y CG + +A+++F + WNSMI
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 476 IGLA-------------------------------INGQGEEAIELFSRLQLSGSKPDDV 562
+G A NG+ ++A+++F +Q KPD
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 563 SFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKH--YSCMVDALGRAGFLEE 721
+ + +L N C +G + + + I + + + + ++D + G +EE
Sbjct: 260 TMVSLL---NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
gi|557112734|gb|ESQ53018.1| hypothetical protein
EUTSA_v10017572mg [Eutrema salsugineum]
Length = 546
Score = 272 bits (695), Expect = 2e-70
Identities = 146/348 (41%), Positives = 208/348 (59%), Gaps = 22/348 (6%)
Frame = +2
Query: 2 IFMYANCGF------LFDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
+ MYA CG +F FD VAWNSM+MGLA+ G ++++++LFD+M ++ ++WN
Sbjct: 167 LHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWN 226
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI G+V+NGR K+A ++F +MQ + + P F + SLL AC LGA EQG WI Y K+
Sbjct: 227 SMISGFVKNGRFKDALEMFRKMQERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKN 286
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+ E+NSIV+TA+++ YCKCG +++ +VF AP K LS WNSM++GLA NG E A++LF
Sbjct: 287 RFELNSIVITALIDMYCKCGCIEEGLRVFESAPNKQLSCWNSMVLGLANNGYEERAMDLF 346
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
S L+ S +PD VSFIGVLT+ + G V EA ++F +M + I+P+IKHY+CMV+ LG
Sbjct: 347 SELESSDLEPDSVSFIGVLTACAYSGKVDEAGEFFRLMREKYLIEPSIKHYTCMVNVLGG 406
Query: 704 AGFLEEAEGPIANMTQTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMYFC-- 877
AG LEEAE I NM + + W + + N N A C
Sbjct: 407 AGLLEEAEAMIKNMPM-------------EQDAIIWSSLLSACRKNGNVEMAERAAKCLK 453
Query: 878 --------------HAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+AY S FE+ + R+L ++ + KE GCS IE
Sbjct: 454 KLDPDDTCGYVLMSNAYASYGLFEEAVEQRVLMKERQMEKEIGCSSIE 501
Score = 60.8 bits (146), Expect = 8e-07
Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 34/234 (14%)
Frame = +2
Query: 122 LFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFFQM-QNQ*IHPTEFALASLLTACGGLG 298
LF ++ K+ WN++I G+ R+ + + +F M + P S+ A LG
Sbjct: 80 LFTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQRLTYPSVFKAYASLG 139
Query: 299 ALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMII 478
G + K +E +S + ++ Y CG +A+++F + WNSM++
Sbjct: 140 KARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMM 199
Query: 479 GLA-------------------------------INGQGEEAIELFSRLQLSGSKPDDVS 565
GLA NG+ ++A+E+F ++Q KPD +
Sbjct: 200 GLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRKMQERNVKPDGFT 259
Query: 566 FIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKH--YSCMVDALGRAGFLEE 721
+ +L N C +G + + + I K + + + ++D + G +EE
Sbjct: 260 MVSLL---NACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCKCGCIEE 310
>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325851|gb|EFH56271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 542
Score = 268 bits (686), Expect = 2e-69
Identities = 150/339 (44%), Positives = 213/339 (62%), Gaps = 13/339 (3%)
Frame = +2
Query: 2 IFMYANCGFL------FDEDSSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWN 163
+ MY CG L F FD VAWNS+IMGLAK G +D++++LFD+M ++ V+WN
Sbjct: 168 LHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWN 227
Query: 164 SMIGGYVRNGRLKEAFDLFFQMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKS 343
SMI G+VRNGR K+A ++F +MQ + + P F + SLL AC LGA EQG WI Y ++
Sbjct: 228 SMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRN 287
Query: 344 KIEVNSIVLTAIVEKYCKCGSVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELF 523
+ E+NSIV+TA+++ YCKCG ++ +VF AP K LS WNSMI+GLA NG E A++LF
Sbjct: 288 RFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLF 347
Query: 524 SRLQLSGSKPDDVSFIGVLTSGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGR 703
L+ +G +PD VSFIGVLT+ H G V +A ++F +M + I+P+IKHY+CMV+ LG
Sbjct: 348 LELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGG 407
Query: 704 AGFLEEAEGPIANMT---QTLLHGH--PCFQLV*NMEILRWRNKQQSNC-SNWNQVKAAA 865
AG L+EAE I M T++ + N+E+ K+ +NC N + +
Sbjct: 408 AGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMA----KRAANCLKNLDPDETCG 463
Query: 866 -MYFCHAYRSSARFEDTMNLRLLTQKTGLRKEPGCSLIE 979
+ +AY S FE+ + RLL ++ + KE GCS IE
Sbjct: 464 YVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
gi|565472276|ref|XP_006293940.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562647|gb|EOA26837.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562648|gb|EOA26838.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
Length = 555
Score = 260 bits (664), Expect = 7e-67
Identities = 142/322 (44%), Positives = 201/322 (62%), Gaps = 10/322 (3%)
Frame = +2
Query: 44 SSFDAVAWNSMIMGLAKSGQVDESRRLFDKMESKSTVNWNSMIGGYVRNGRLKEAFDLFF 223
+ FD VAWNSMIMGLAK G + ++++LFD+M ++ V+WNSMI G+VRNGR K+A ++F
Sbjct: 183 TDFDVVAWNSMIMGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFR 242
Query: 224 QMQNQ*IHPTEFALASLLTACGGLGALEQGEWICAYNRKSKIEVNSIVLTAIVEKYCKCG 403
+MQ + + P F + SLL AC LGA EQG WI Y +++ E+NSIV+TA++E YCKCG
Sbjct: 243 EMQERNVKPDGFTMVSLLNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCG 302
Query: 404 SVDKAFQVFNDAPKKGLSTWNSMIIGLAINGQGEEAIELFSRLQLSGSKPDDVSFIGVLT 583
+++ +VF APKK LS WNSMI+GLA NG E A++LF L+ G +PD VSFIGVLT
Sbjct: 303 CIEEGLKVFECAPKKQLSCWNSMILGLANNGCEERAMDLFLELERFGLEPDSVSFIGVLT 362
Query: 584 SGNHCGMVGEARKYFLVMTKICKIKPTIKHYSCMVDALGRAGFLEEAEGPIANMT----- 748
+ + G V +A +F +M + ++P+IKHY+CMV+ LG AG L+EAE I M
Sbjct: 363 ACAYSGEVHKAGGFFRLMREKYMVEPSIKHYTCMVNVLGGAGLLDEAESLIKKMPVEEDA 422
Query: 749 ---QTLLHGHPCFQLV*NMEILRWRNKQQSNCSNWNQVKAAAMY--FCHAYRSSARFEDT 913
+LL + N+E+ K+ + C Y +AY FE+
Sbjct: 423 IIWSSLLAACRKYS---NVEMA----KRAAKCLKKLDPDETCGYVLMSNAYAHYGLFEEA 475
Query: 914 MNLRLLTQKTGLRKEPGCSLIE 979
+ R+L ++ + KE GCS IE
Sbjct: 476 VEQRILMKERKMEKEVGCSSIE 497