BLASTX nr result
ID: Sinomenium22_contig00018521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00018521
(1321 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006829732.1| hypothetical protein AMTR_s00126p00110160 [A... 223 e-102
sp|Q0D8N0.2|RH53_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 179 8e-81
ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 177 4e-80
ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 177 4e-80
ref|XP_002461445.1| hypothetical protein SORBIDRAFT_02g002790 [S... 175 1e-79
ref|XP_004491264.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 172 2e-79
ref|XP_007217634.1| hypothetical protein PRUPE_ppa002643mg [Prun... 177 7e-79
ref|XP_004955446.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 171 7e-79
ref|XP_007141482.1| hypothetical protein PHAVU_008G199700g [Phas... 173 9e-79
dbj|BAJ89481.1| predicted protein [Hordeum vulgare subsp. vulgare] 177 2e-78
ref|XP_006836382.1| hypothetical protein AMTR_s00092p00127820 [A... 173 4e-78
gb|EMS54347.1| DEAD-box ATP-dependent RNA helicase 53 [Triticum ... 175 4e-78
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 167 6e-78
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera] 167 8e-78
ref|NP_001147777.1| nucleolar RNA helicase 2 [Zea mays] gi|19561... 167 8e-78
ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase [Arabidopsi... 164 8e-78
ref|XP_006658271.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 170 2e-77
ref|XP_006297246.1| hypothetical protein CARUB_v10013251mg [Caps... 163 5e-77
ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag... 166 6e-77
ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 166 8e-77
>ref|XP_006829732.1| hypothetical protein AMTR_s00126p00110160 [Amborella trichopoda]
gi|548835251|gb|ERM97148.1| hypothetical protein
AMTR_s00126p00110160 [Amborella trichopoda]
Length = 654
Score = 223 bits (567), Expect(2) = e-102
Identities = 130/264 (49%), Positives = 166/264 (62%), Gaps = 5/264 (1%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+++ +GGKSI+FTRTKKDAE LSR++G L SRALHGNMQQFQRD+TLAAFRDG F+VLV
Sbjct: 319 TKFAQGGKSIVFTRTKKDAEVLSRTMGSTLGSRALHGNMQQFQRDRTLAAFRDGHFNVLV 378
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRS VLIYT+ QRR V +I
Sbjct: 379 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLIYTEDQRRTVRLI 438
Query: 621 EQDLGCKFDELPKVTD-GIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFAERQFESYRGS 445
E+D+GCKF+ELPK+ D G + G R +R P SG F+SYR S
Sbjct: 439 ERDVGCKFEELPKIKDVGSIPDNFEESPRGGFVDRVRSRFDRPSNSG---VTHFDSYRSS 495
Query: 444 RPNSYGNSNGTRNQFSKGSKKLDGYTR----GHESSKKNNLSQIRGVRSSYFSNSKRTPK 277
+ + Y ++ TR +GS+ D R G+ES ++ S RG S+ + + +
Sbjct: 496 QGSRYDTADETR---GRGSRDFDSSRRGQFGGYESYERTPFSSNRG--RSHCQPANQRTQ 550
Query: 276 FQNYEDFERSYTTEKNAAERKQDG 205
F +F TE+ +++G
Sbjct: 551 FGGSSNFGSKRFTERGKHYSEREG 574
Score = 177 bits (449), Expect(2) = e-102
Identities = 84/106 (79%), Positives = 99/106 (93%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PIM+Q R + G DI VGTPGRIIDL+E+GAL+LSEVKFVVLDEAD+MLAVGFQE VECI
Sbjct: 190 PIMNQVRVLSFGTDIVVGTPGRIIDLIERGALDLSEVKFVVLDEADEMLAVGFQEAVECI 249
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
++YLP++KQCMLFSATMPSWVN+L+KKYLRDPLV+DLVG+S+QKLA
Sbjct: 250 MNYLPSKKQCMLFSATMPSWVNELAKKYLRDPLVIDLVGDSEQKLA 295
>sp|Q0D8N0.2|RH53_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 53
gi|218199081|gb|EEC81508.1| hypothetical protein
OsI_24871 [Oryza sativa Indica Group]
gi|222636421|gb|EEE66553.1| hypothetical protein
OsJ_23067 [Oryza sativa Japonica Group]
Length = 602
Score = 179 bits (453), Expect(2) = 8e-81
Identities = 115/276 (41%), Positives = 149/276 (53%), Gaps = 33/276 (11%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK++A+ L+ ++G A +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 325 HANGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVAT 384
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLVIH+E+PNTSE+FVHRS +LIYT Q RAV IIEQ
Sbjct: 385 DVAARGLDIPNVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQ 444
Query: 615 DLGCKFDELPK-------------VTDGIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFA 475
D+GCKF ELPK V D GS S+GR G S F
Sbjct: 445 DIGCKFTELPKIEVADEASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFG 504
Query: 474 ERQFESYRGSRPNSYGNSNGTRNQFSKG---------------SKKLDGYTRGHESSKKN 340
+ F+ + GS PN G S +++ G SK+ DG+ G +
Sbjct: 505 D--FDGF-GSSPNRGGRSRDAGSRYGSGFGDFRRPSNAFGRSSSKQPDGF--GFGDFGEG 559
Query: 339 NLSQIRGVRSSYFSNS-----KRTPKFQNYEDFERS 247
N S+ RS F +S R P DF RS
Sbjct: 560 NFSRNGNRRSRSFDDSGSTRYSRRPNGFGTSDFGRS 595
Score = 150 bits (379), Expect(2) = 8e-81
Identities = 69/105 (65%), Positives = 86/105 (81%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q RA+ G+D+ VGTPGRIIDL+ +G LNLSE++FVVLDEADQMLAVGF EDVE I
Sbjct: 194 PISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVI 253
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ ++ KYL+DP+++DLVG+ DQKL
Sbjct: 254 MENLPQNRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKL 298
>ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
sativus]
Length = 611
Score = 177 bits (450), Expect(2) = 4e-80
Identities = 99/202 (49%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ +GKGGK IIFT+TK+DA+ L+ ++G L ALHG++ Q QR++TL+ FRDGRF+VLV
Sbjct: 347 TEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLV 406
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDLVIHFE+PN +EIFVHRS +LIY++ Q RA+ +I
Sbjct: 407 ATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMI 466
Query: 621 EQDLGCKFDELPKVT--DGIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFAER--QFESY 454
E+++GC+F+ELP++T G +M S G +G D +++N SG F R F
Sbjct: 467 EREVGCRFNELPRITVEAGAHVDMFSGGSFGGGFG--DRQMNN---SGRFGNRGGSFGRS 521
Query: 453 RGSRPNSYGNSNGTRNQFSKGS 388
G +S+G S G + S GS
Sbjct: 522 GGYESSSFGRSIGRNSGPSSGS 543
Score = 149 bits (376), Expect(2) = 4e-80
Identities = 73/106 (68%), Positives = 88/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DIAVGTPGR+IDL+ +G+LNLSEV+FVVLDEADQML VGFQEDVE I
Sbjct: 218 PISQQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKI 277
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q M+FSATMPSW+ LS+ YL +PL +DLVG+SDQKLA
Sbjct: 278 LERLPQKRQSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLA 323
>ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
sativus]
Length = 593
Score = 177 bits (450), Expect(2) = 4e-80
Identities = 99/202 (49%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ +GKGGK IIFT+TK+DA+ L+ ++G L ALHG++ Q QR++TL+ FRDGRF+VLV
Sbjct: 347 TEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVLV 406
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDLVIHFE+PN +EIFVHRS +LIY++ Q RA+ +I
Sbjct: 407 ATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRMI 466
Query: 621 EQDLGCKFDELPKVT--DGIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFAER--QFESY 454
E+++GC+F+ELP++T G +M S G +G D +++N SG F R F
Sbjct: 467 EREVGCRFNELPRITVEAGAHVDMFSGGSFGGGFG--DRQMNN---SGRFGNRGGSFGRS 521
Query: 453 RGSRPNSYGNSNGTRNQFSKGS 388
G +S+G S G + S GS
Sbjct: 522 GGYESSSFGRSIGRNSGPSSGS 543
Score = 149 bits (376), Expect(2) = 4e-80
Identities = 73/106 (68%), Positives = 88/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DIAVGTPGR+IDL+ +G+LNLSEV+FVVLDEADQML VGFQEDVE I
Sbjct: 218 PISQQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKI 277
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q M+FSATMPSW+ LS+ YL +PL +DLVG+SDQKLA
Sbjct: 278 LERLPQKRQSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLA 323
>ref|XP_002461445.1| hypothetical protein SORBIDRAFT_02g002790 [Sorghum bicolor]
gi|241924822|gb|EER97966.1| hypothetical protein
SORBIDRAFT_02g002790 [Sorghum bicolor]
Length = 602
Score = 175 bits (443), Expect(2) = 1e-79
Identities = 108/262 (41%), Positives = 147/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK+DA+ L+ +G +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 327 HANGGKCIVFTQTKRDADRLAYVMGRSYPCQALHGDISQNQRERTLSGFRDGRFNILVAT 386
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLV+H+EIPNTSE+FVHRS +LIYT Q RAV +IEQ
Sbjct: 387 DVAARGLDIPNVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQ 446
Query: 615 DLGCKFDELPKVTDGIKEEMGSM-----DVNDGSYGRHDT--RVSNPGYSGHFAERQFES 457
D+GC+F ELPK+ + +E M D S G T S GY G F
Sbjct: 447 DIGCRFTELPKMP--VSDEAADMFNVTRDTRSRSAGSRRTGGPFSREGYGG------FGD 498
Query: 456 YRGSRPNSYGNSNGTRNQFSKGSKKLDGYTRG--HESSKKNNLSQIRGVRSSYFSNSKRT 283
+R S +G S+ F + G + G SS+ S R R F +S +
Sbjct: 499 HRSSSFGDFGGSSDRSGGFRDSGSRYRGGSGGLRRSSSELGRPSFSRSDRFGDFGDSDFS 558
Query: 282 PKFQNYEDFERSYTTEKNAAER 217
+ DF RS +++ + + R
Sbjct: 559 RR--GNTDFGRSRSSDDSGSSR 578
Score = 150 bits (378), Expect(2) = 1e-79
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DI VGTPGRIIDL+ +G LNLS+++FVVLDEADQMLAVGF EDVE I
Sbjct: 196 PINQQMRVLNYGVDIVVGTPGRIIDLLRRGVLNLSQIQFVVLDEADQMLAVGFDEDVEVI 255
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ +S KYL DP+++DLVG+SDQKL
Sbjct: 256 MEQLPQNRQSMLFSATMPSWIRKISNKYLNDPVIIDLVGDSDQKL 300
>ref|XP_004491264.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cicer
arietinum]
Length = 592
Score = 172 bits (436), Expect(2) = 2e-79
Identities = 106/252 (42%), Positives = 142/252 (56%), Gaps = 9/252 (3%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ KGGK I+FT+TK+DA+ LS + + ALHG++ Q QR++TLA FR G F+VLVAT
Sbjct: 325 HAKGGKCIVFTQTKRDADRLSHGMSKSIPCEALHGDISQAQRERTLAGFRSGDFNVLVAT 384
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVA+RGLDIPNVDLVIH+E+PN SEIFVHRS +LIYT+ Q R + IE+
Sbjct: 385 DVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILIYTEDQSRTLRTIER 444
Query: 615 DLGCKFDELPKVT--DGIKEEMGSMDVND-GSYGRHDTRVSNPGYSGHFAERQFESYRG- 448
D+GC+F ELPKV + GSM GS+G R S+ G+ + Y G
Sbjct: 445 DVGCRFKELPKVAVDSASVDAFGSMGGGRFGSFGGSRGRFSDAGFGRDAGPSRSGGYGGN 504
Query: 447 -----SRPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSNSKRT 283
S +S+G SN R S+ + +R ES S+ + R FS S R+
Sbjct: 505 SGGRFSGESSFGRSNSGRFGSFGSSQSHNSGSRSGESP-----SEFKFSRPGGFSGSDRS 559
Query: 282 PKFQNYEDFERS 247
F + +RS
Sbjct: 560 GGFGGFGGSDRS 571
Score = 152 bits (383), Expect(2) = 2e-79
Identities = 72/106 (67%), Positives = 89/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DIAVGTPGRIIDL+ +GALNL EV+FV+LDEADQML VGFQEDVE I
Sbjct: 194 PISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKI 253
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LPA++Q ++FSATMP+W+ L++ YL+DPL +DLVG+SDQKLA
Sbjct: 254 LERLPAKRQTLMFSATMPTWIKQLTRNYLKDPLTIDLVGDSDQKLA 299
>ref|XP_007217634.1| hypothetical protein PRUPE_ppa002643mg [Prunus persica]
gi|462413784|gb|EMJ18833.1| hypothetical protein
PRUPE_ppa002643mg [Prunus persica]
Length = 649
Score = 177 bits (450), Expect(2) = 7e-79
Identities = 113/274 (41%), Positives = 155/274 (56%), Gaps = 16/274 (5%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ KGGK I+FT+TK+DA+ L+ ++ ALHG++ Q QR++TLA FRDG F++LVAT
Sbjct: 354 HAKGGKCIVFTQTKRDADRLAYAMSRSYKCEALHGDINQTQRERTLAGFRDGNFNILVAT 413
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLD+PNVDLVIH+E+PN SEIFVHRS +L+YT+ Q RAV IEQ
Sbjct: 414 DVAARGLDVPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGSAILVYTQDQSRAVRTIEQ 473
Query: 615 DLGCKFDELPKV-TDG----IKEEMGSMDVNDGSYGRHDTRVSNPGY---SGH-FAERQF 463
D+GCKF ELP++ DG + +MG + +G+ S PG+ SG+ + Q
Sbjct: 474 DVGCKFTELPRIAVDGKSIDMMPDMGRFNTKSSRFGQAGPGFSRPGFGRSSGYGDSSGQM 533
Query: 462 ESYRGSRP---NSYGNSNGTRNQFS-KGSKK---LDGYTRGHESSKKNNLSQIRGVRSSY 304
GSRP S+G+S + FS GS + G G S S R
Sbjct: 534 GRSSGSRPGRFGSFGDSAQSGGGFSGSGSNRGGNFGGSGFGRSSGSGGFGSSDRSSGFGG 593
Query: 303 FSNSKRTPKFQNYEDFERSYTTEKNAAERKQDGF 202
F +S R+ F + +RS +N + +Q GF
Sbjct: 594 FGSSDRSSGFGGFGGSDRS-GGSRNFSLDRQSGF 626
Score = 145 bits (365), Expect(2) = 7e-79
Identities = 69/106 (65%), Positives = 86/106 (81%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+D+AVGTPGR+IDL+ +GALNLSEV+FVVLDEADQML VGFQE VE I
Sbjct: 223 PISSQMRQLDYGVDVAVGTPGRVIDLINRGALNLSEVQFVVLDEADQMLQVGFQEAVEII 282
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q ++FSATMP W+ L++ YL++P V+DLVG SDQKLA
Sbjct: 283 LEKLPKKRQTLMFSATMPGWIKKLTQNYLKNPEVIDLVGESDQKLA 328
>ref|XP_004955446.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
53-like [Setaria italica]
Length = 609
Score = 171 bits (433), Expect(2) = 7e-79
Identities = 102/264 (38%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK++A+ L+ +G +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 331 HANGGKCIVFTQTKREADRLAYVMGRSYPCQALHGDISQNQRERTLSGFRDGRFNILVAT 390
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLV+H+EIPNTSE+FVHRS +LIYT Q RAV +IEQ
Sbjct: 391 DVAARGLDIPNVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQ 450
Query: 615 DLGCKFDELPKVTDGIKEEMGSM-----DVNDGSYGRHDTRVSNPGYSGHFAERQFESYR 451
D+GC+F ELPK+ + +E M D S G T G F + +
Sbjct: 451 DIGCRFTELPKM--AVADEXADMFNVMRDTRSRSVGSRRT-------GGXFGRESYGGFG 501
Query: 450 GSRPNSYGNSNGTRNQFSKGSKKLD---GYTRGHESSKK--NNLSQIRGVRSSYFSN-SK 289
R +G+ + F +G D GY G ++ N+ + RS F + +
Sbjct: 502 DHRSGGFGDFDSFGGSFDRGGGSRDSGSGYRGGSGGFRRPSNDFGRSSFGRSDRFGDFGE 561
Query: 288 RTPKFQNYEDFERSYTTEKNAAER 217
+ DF RS +++ + + R
Sbjct: 562 GDFSRRGSPDFGRSRSSDDSGSSR 585
Score = 151 bits (382), Expect(2) = 7e-79
Identities = 70/105 (66%), Positives = 86/105 (81%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DI VGTPGR+IDL+ +G LNLSE++FVVLDEADQMLAVGF EDVE I
Sbjct: 200 PINQQMRVLNYGVDIVVGTPGRVIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVI 259
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ +S KYL+DP+++DLVG+SDQKL
Sbjct: 260 MEQLPQNRQSMLFSATMPSWIRKISNKYLKDPVIIDLVGDSDQKL 304
>ref|XP_007141482.1| hypothetical protein PHAVU_008G199700g [Phaseolus vulgaris]
gi|561014615|gb|ESW13476.1| hypothetical protein
PHAVU_008G199700g [Phaseolus vulgaris]
Length = 619
Score = 173 bits (438), Expect(2) = 9e-79
Identities = 105/253 (41%), Positives = 139/253 (54%), Gaps = 23/253 (9%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ + KGGK I+FT+TK+DA+ LS ++G + ALHG++ Q QR+KTLA FR+G FSVLV
Sbjct: 319 TEHAKGGKCIVFTQTKRDADRLSFTMGKSVQCEALHGDISQAQREKTLAGFRNGHFSVLV 378
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVA+RGLDIPNVDLVIH+E+PN+SEIFVHRS +L+YT+ Q RAV +I
Sbjct: 379 ATDVASRGLDIPNVDLVIHYELPNSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVRLI 438
Query: 621 EQDLGCKFDELPKVTDGIKEEMGSMDV-------------------NDGSYGRHDTRVSN 499
E+D+GCKF ELP+ I + SMD D +GR +
Sbjct: 439 ERDVGCKFTELPR----IAVDSASMDAIGMGGGRFGSSGGIRDRRYGDTGFGRGPGSGRS 494
Query: 498 PGYSGHFAERQF----ESYRGSRPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLS 331
GY+ F F E + G N +G S GS + G G S +S
Sbjct: 495 GGYNSGFGRPSFGDSGERFGGQSYNRFGGS---------GSSQSGG---GFSGSSSGEMS 542
Query: 330 QIRGVRSSYFSNS 292
+ G S F +S
Sbjct: 543 RYSGSNSGRFGSS 555
Score = 149 bits (376), Expect(2) = 9e-79
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DIAVGTPGRIIDL+ +GALNL EV+FVVLDEADQML VGFQE+VE I
Sbjct: 190 PISKQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVVLDEADQMLQVGFQEEVEKI 249
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q ++FSATMPSW+ +S+ YL DPL +DLVG+SDQKLA
Sbjct: 250 LERLPLKRQTLMFSATMPSWIKQISRNYLNDPLTIDLVGDSDQKLA 295
>dbj|BAJ89481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 177 bits (450), Expect(2) = 2e-78
Identities = 109/245 (44%), Positives = 148/245 (60%), Gaps = 9/245 (3%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK++A+ L+ ++G A +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 328 HADGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVAT 387
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLV+H+EIPN+SE+FVHRS +L+YT Q R V IEQ
Sbjct: 388 DVAARGLDIPNVDLVVHYEIPNSSELFVHRSGRTARAGKKGIAILMYTYEQSRTVKGIEQ 447
Query: 615 DLGCKFDELPKV--TDGIKEEMGSM-DVNDGSYGRHDTRVSNPGYSGHFAER------QF 463
D+GC+F ELPKV TD E M D S G + S+ + G F ER +F
Sbjct: 448 DIGCRFTELPKVAATDEAAELFNVMRDTRSRSVGTRRSGGSSFSHYGGFGERHSRGFGEF 507
Query: 462 ESYRGSRPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSNSKRT 283
+S+ G PN G S GS+ G+ +SS+ +N RSS F +S+R
Sbjct: 508 DSF-GGTPNRAGWS------ADAGSRYRGGFGDSRQSSQPSN----GFGRSSGFGDSRRG 556
Query: 282 PKFQN 268
P+ N
Sbjct: 557 PQTSN 561
Score = 143 bits (361), Expect(2) = 2e-78
Identities = 65/105 (61%), Positives = 85/105 (80%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+D+ VGTPGR+IDL+ +G LNLSE++F+VLDEADQMLAVGF E VE I
Sbjct: 197 PISQQMRTLNYGVDVVVGTPGRVIDLLRRGVLNLSEIQFMVLDEADQMLAVGFDEAVEVI 256
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ L+ +YL+DP+++DLVG+S+QKL
Sbjct: 257 MEKLPQNRQSMLFSATMPSWIRKLTNQYLKDPVIIDLVGDSEQKL 301
>ref|XP_006836382.1| hypothetical protein AMTR_s00092p00127820 [Amborella trichopoda]
gi|548838900|gb|ERM99235.1| hypothetical protein
AMTR_s00092p00127820 [Amborella trichopoda]
Length = 622
Score = 173 bits (439), Expect(2) = 4e-78
Identities = 106/265 (40%), Positives = 143/265 (53%), Gaps = 23/265 (8%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ + KGGK I+FT+TK+DA+ L+ ++G L ALHG++ Q QR++TL+ FRDGRF++LV
Sbjct: 346 TEHAKGGKCIVFTQTKRDADRLAYAMGRNLKCEALHGDISQNQRERTLSGFRDGRFNILV 405
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDL+IH+E+P+TSEIFVHRS +LIYT Q RAV +I
Sbjct: 406 ATDVAARGLDIPNVDLIIHYELPSTSEIFVHRSGRTGRAGKKGTAILIYTDQQTRAVRVI 465
Query: 621 EQDLGCKFDELP--KVTDGIKEEMG--------------------SMDVNDGSYGRHDTR 508
EQD+G KF ELP KV G ++ G S D +GR R
Sbjct: 466 EQDVGSKFTELPRIKVEGGDRDMFGDIGGGRFGSGSRFGSTGFGRSGGFGDSGFGRSSNR 525
Query: 507 VSNPGYSGHFAERQFESYRGSRPNSYGNSN-GTRNQFSKGSKKLDGYTRGHESSKKNNLS 331
+ G SG F + R +G S G + F + G G SS+
Sbjct: 526 SGSFGASGSGRSSGFGDFGSGRSGGFGGSGFGRSSGFGESGSSSFG---GSGSSRSGGFG 582
Query: 330 QIRGVRSSYFSNSKRTPKFQNYEDF 256
RS F +S + +F ++ F
Sbjct: 583 DSGSKRSGGFGDSS-SSRFGSFGGF 606
Score = 146 bits (369), Expect(2) = 4e-78
Identities = 71/106 (66%), Positives = 88/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q + G+D+ VGTPGRIIDL+++GALNLSEV+FVVLDEADQMLAVGF+E VE I
Sbjct: 217 PISSQMNTLDYGVDVVVGTPGRIIDLLKRGALNLSEVQFVVLDEADQMLAVGFEEAVEII 276
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q M+FSATMPSW+ L++KYL+ PL VDLVG+S+QKLA
Sbjct: 277 LDKLPPKRQSMMFSATMPSWIRTLTQKYLKAPLTVDLVGDSEQKLA 322
>gb|EMS54347.1| DEAD-box ATP-dependent RNA helicase 53 [Triticum urartu]
Length = 619
Score = 175 bits (444), Expect(2) = 4e-78
Identities = 108/246 (43%), Positives = 145/246 (58%), Gaps = 3/246 (1%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK IIFT+TK++A+ L+ ++G A +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 328 HADGGKCIIFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVAT 387
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLV+H+EIPN+SE+FVHRS +L+YT Q R V +IEQ
Sbjct: 388 DVAARGLDIPNVDLVVHYEIPNSSELFVHRSGRTARAGKKGIAILMYTYEQSRTVKVIEQ 447
Query: 615 DLGCKFDELPKV--TDGIKEEMGSM-DVNDGSYGRHDTRVSNPGYSGHFAERQFESYRGS 445
D+GC+F ELPKV TD + M D S G + S+ + G F ER + G
Sbjct: 448 DIGCRFTELPKVAATDEAADLFNVMRDTRSRSVGTRRSGGSSFSHGGGFGERHSRGF-GD 506
Query: 444 RPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSNSKRTPKFQNY 265
+ G N T GS+ G+ S+ +N RSS F +S R P Q
Sbjct: 507 FDSFGGTPNRTGWSRDAGSRYRGGFGDSRRPSQPSN----GFGRSSGFGDSWRGP--QPS 560
Query: 264 EDFERS 247
+ F RS
Sbjct: 561 DGFGRS 566
Score = 144 bits (364), Expect(2) = 4e-78
Identities = 66/105 (62%), Positives = 85/105 (80%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+D+ VGTPGR+IDL+ +G LNLSE++FVVLDEADQMLAVGF E VE I
Sbjct: 197 PISQQMRTLNYGVDVVVGTPGRVIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEAVEVI 256
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ L+ +YL+DP+++DLVG+S+QKL
Sbjct: 257 MEKLPQNRQSMLFSATMPSWIRKLTNQYLKDPVIIDLVGDSEQKL 301
>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
vinifera]
Length = 666
Score = 167 bits (424), Expect(2) = 6e-78
Identities = 110/269 (40%), Positives = 146/269 (54%), Gaps = 8/269 (2%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ + KGGK I+FT+TK+DA+ L+ ++ ALHG++ Q QR++TL+ FRDG F+VLV
Sbjct: 355 TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLV 414
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDL+IH+E+PN+SEIFVHRS +LIY + Q R V I
Sbjct: 415 ATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFI 474
Query: 621 EQDLGCKFDELPKVT-DGIKEEMGSMDVNDGSYGRHDTRVSNPG--YSGHFAERQFESYR 451
E+D+GCKF ELP++ +G +M S G GR + S G G F R S+
Sbjct: 475 ERDIGCKFSELPRIAIEGGSRDMFSDMGGGGDGGRFGSFGSRGGGRVGGGFG-RSGSSF- 532
Query: 450 GSRPNSYGNS-NGTRNQFSK-GSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSN---SKR 286
R YG S +G F GS + G G SS+ N RS F + S R
Sbjct: 533 -GRSGGYGESGSGRSGSFGGFGSSRSGG---GSSSSRSGNFGGSSFGRSGEFGDTIGSDR 588
Query: 285 TPKFQNYEDFERSYTTEKNAAERKQDGFQ 199
+ F N RS + GF+
Sbjct: 589 SSGFGNSSGSHRSSGFGNFGGSDRSSGFR 617
Score = 152 bits (383), Expect(2) = 6e-78
Identities = 72/106 (67%), Positives = 90/106 (84%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q ++ G+D+ VGTPGRIIDL+++GALNLSEV+FVVLDEADQMLAVGF+EDVE I
Sbjct: 226 PISRQMNSLDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMI 285
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP +Q M+FSATMPSW+ L++KYL++PL +DLVG+SDQKLA
Sbjct: 286 LEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLA 331
>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
Length = 666
Score = 167 bits (423), Expect(2) = 8e-78
Identities = 110/269 (40%), Positives = 146/269 (54%), Gaps = 8/269 (2%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ + KGGK I+FT+TK+DA+ L+ ++ ALHG++ Q QR++TL+ FRDG F+VLV
Sbjct: 355 TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLV 414
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLDIPNVDL+IH+E+PN+SEIFVHRS +LIY + Q R V I
Sbjct: 415 ATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFI 474
Query: 621 EQDLGCKFDELPKVT-DGIKEEMGSMDVNDGSYGRHDTRVSNPG--YSGHFAERQFESYR 451
E+D+GCKF ELP++ +G +M S G GR + S G G F R S+
Sbjct: 475 ERDIGCKFSELPRIAIEGGSRDMLSDMGGGGDGGRFGSFGSRGGGRVGGGFG-RSGSSF- 532
Query: 450 GSRPNSYGNS-NGTRNQFSK-GSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSN---SKR 286
R YG S +G F GS + G G SS+ N RS F + S R
Sbjct: 533 -GRSGGYGESGSGRSGSFGGFGSSRSGG---GSSSSRSGNFGGSSFGRSGEFGDTIGSDR 588
Query: 285 TPKFQNYEDFERSYTTEKNAAERKQDGFQ 199
+ F N RS + GF+
Sbjct: 589 SSGFGNSSGSHRSSGFGNFGGSDRSSGFR 617
Score = 152 bits (383), Expect(2) = 8e-78
Identities = 72/106 (67%), Positives = 90/106 (84%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q ++ G+D+ VGTPGRIIDL+++GALNLSEV+FVVLDEADQMLAVGF+EDVE I
Sbjct: 226 PISRQMNSLDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMI 285
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP +Q M+FSATMPSW+ L++KYL++PL +DLVG+SDQKLA
Sbjct: 286 LEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLA 331
>ref|NP_001147777.1| nucleolar RNA helicase 2 [Zea mays] gi|195613718|gb|ACG28689.1|
nucleolar RNA helicase 2 [Zea mays]
Length = 613
Score = 167 bits (423), Expect(2) = 8e-78
Identities = 107/268 (39%), Positives = 149/268 (55%), Gaps = 14/268 (5%)
Frame = -2
Query: 963 GKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVATDVAA 784
GK I+FT+TK++A+ L+ +G +ALHG++ Q QR++TL+ FRDGRF++LVATDVAA
Sbjct: 340 GKCIVFTQTKREADRLAYVMGRSYQCQALHGDISQNQRERTLSGFRDGRFNILVATDVAA 399
Query: 783 RGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQDLGC 604
RGLDIPNVDLV+H+EIPNTSE+FVHRS +LIYT Q RAV +IEQD+GC
Sbjct: 400 RGLDIPNVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGC 459
Query: 603 KFDELPKVTDGIKEEMGSM-----DVNDGSYGRHDT--RVSNPGYSGHFAERQ------F 463
+F ELPK+ + +E M D S G T S GY G F + + F
Sbjct: 460 RFTELPKMP--VSDEAADMFNVMRDTRSRSVGSRRTGGPFSREGY-GDFEDHRSRGFGDF 516
Query: 462 ESYRGSRPNSYG-NSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSNSKR 286
+ + GS G +G+R G + G S +++ S G SYFS
Sbjct: 517 DRFGGSSDRGGGFRDSGSRYHGGSGGFRRSSSDFGRPSLSRSDRSGDFG--DSYFSR--- 571
Query: 285 TPKFQNYEDFERSYTTEKNAAERKQDGF 202
+ DF RS +++ + + G+
Sbjct: 572 ----RGNADFGRSRSSDDSGSSHYPRGY 595
Score = 152 bits (383), Expect(2) = 8e-78
Identities = 70/105 (66%), Positives = 87/105 (82%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q RA+ G+DI VGTPGR+IDL+ +G LNLS+++FVVLDEADQMLAVGF EDVE I
Sbjct: 205 PINQQMRALNYGVDIVVGTPGRVIDLLRRGVLNLSQIQFVVLDEADQMLAVGFDEDVEVI 264
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ +S KYL+DP+++DLVG+SDQKL
Sbjct: 265 MEQLPQNRQSMLFSATMPSWIRKISNKYLKDPVIIDLVGDSDQKL 309
>ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|75335517|sp|Q9LUW6.1|RH9_ARATH RecName: Full=DEAD-box
ATP-dependent RNA helicase 9 gi|9293865|dbj|BAB01768.1|
DEAD-Box RNA helicase-like protein [Arabidopsis thaliana]
gi|20268676|gb|AAM14042.1| putative RNA helicase
[Arabidopsis thaliana] gi|332643099|gb|AEE76620.1|
DEAD-box ATP-dependent RNA helicase [Arabidopsis
thaliana]
Length = 610
Score = 164 bits (414), Expect(2) = 8e-78
Identities = 93/239 (38%), Positives = 130/239 (54%), Gaps = 16/239 (6%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+GKGGK I+FT+TK+DA+ L+ + ALHG++ Q QR++TLA FRDG FS+LVAT
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVAT 417
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLD+PNVDLVIH+E+PN +E FVHR+ +LI+ + Q RAV +IE+
Sbjct: 418 DVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEK 477
Query: 615 DLGCKFDELPKVT---------DGIKEEMG-------SMDVNDGSYGRHDTRVSNPGYSG 484
++G +F+ELP + +G+ G S GSYG R Y G
Sbjct: 478 EVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGSYGG 537
Query: 483 HFAERQFESYRGSRPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSS 307
+ G SYG S G+ +++S GS + G+ R +SS
Sbjct: 538 YGGS---SGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSS 593
Score = 155 bits (392), Expect(2) = 8e-78
Identities = 76/106 (71%), Positives = 90/106 (84%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + GID+AVGTPGRIIDL+++GALNLSEV+FVVLDEADQML VGF EDVE I
Sbjct: 227 PIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEII 286
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LPA++Q M+FSATMPSW+ L+KKYL +PL +DLVG+SDQKLA
Sbjct: 287 LQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLA 332
>ref|XP_006658271.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like, partial
[Oryza brachyantha]
Length = 602
Score = 170 bits (431), Expect(2) = 2e-77
Identities = 107/274 (39%), Positives = 149/274 (54%), Gaps = 31/274 (11%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK++A+ L+ ++G A +ALHG++ Q QR++TL+ FRDGRF++LVAT
Sbjct: 322 HANGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVAT 381
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLVIH+EIPNTSE+FVHRS +LIYT Q RAV +IE
Sbjct: 382 DVAARGLDIPNVDLVIHYEIPNTSELFVHRSGRTARAGKKGSAILIYTSDQARAVRVIEH 441
Query: 615 DLGCKFDELPKV--TDGIKEEMG-SMDVNDGSYGRHDTRVSNPGYSGH--FAERQFESYR 451
D+GC+F ELPK+ TD + + D+ G T S+ G G+ F E + + +
Sbjct: 442 DIGCRFTELPKIPATDEAADMFNVARDIRSRLVGGQRTGGSSFGRGGYGGFGEGRSQGFG 501
Query: 450 -----GSRPNSYGNSNGTRNQFSKG---------------SKKLDGYTRG------HESS 349
G P+ G S +++ G S++ DG+ G S
Sbjct: 502 DFDGFGGFPDRAGRSRDAGSRYGSGFGDFRRPSNAFGRSSSRRPDGFGFGDFGEGKFSRS 561
Query: 348 KKNNLSQIRGVRSSYFSNSKRTPKFQNYEDFERS 247
+ + RG S + R P DF RS
Sbjct: 562 GNTDYRRPRGSDDSGSTRYSRRPNGFGSSDFSRS 595
Score = 147 bits (371), Expect(2) = 2e-77
Identities = 67/105 (63%), Positives = 85/105 (80%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+D+ VGTPGRIIDL+ +G LNLSE++FVVLDE DQMLAVGF EDVE I
Sbjct: 191 PISHQMRVLNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEVDQMLAVGFDEDVEVI 250
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ ++ KYL+DP+++DLVG++DQKL
Sbjct: 251 MENLPQNRQSMLFSATMPSWIRKITNKYLKDPVIIDLVGDADQKL 295
>ref|XP_006297246.1| hypothetical protein CARUB_v10013251mg [Capsella rubella]
gi|482565955|gb|EOA30144.1| hypothetical protein
CARUB_v10013251mg [Capsella rubella]
Length = 609
Score = 163 bits (412), Expect(2) = 5e-77
Identities = 97/257 (37%), Positives = 136/257 (52%), Gaps = 11/257 (4%)
Frame = -2
Query: 981 SRYGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLV 802
+ +GKGGK I+FT+TK+DA+ L+ + ALHG++ Q QR++TLA FRDG F++LV
Sbjct: 358 TEHGKGGKCIVFTQTKRDADRLAYGLARSFKCEALHGDISQAQRERTLAGFRDGNFNILV 417
Query: 801 ATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNII 622
ATDVAARGLD+PNVDLVIH+E+PN +E FVHR+ +LI+ + Q RAV +I
Sbjct: 418 ATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQEQSRAVKMI 477
Query: 621 EQDLGCKFDELPKVT---------DGIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFAER 469
E+++G +F+ELP + +GI G G G S GY G
Sbjct: 478 EKEVGSRFNELPSIAVERGSASMFEGIGARSGGSSFGGGRSGGG----SYGGYGGSSGRS 533
Query: 468 QFESYRGSRPNSYGNSNGTRNQFSKGSKKLDGYTRGHESSKKNNLSQIRGVRSSYFSNSK 289
SY G G S G+ +++S GS + G+ + G S S S
Sbjct: 534 GGGSY-GGYGGGGGRSGGSSSRYSGGSDRSSGFGSFGSGGSDRSSGGFGGFSSDRSSQSS 592
Query: 288 RTPKFQNY--EDFERSY 244
F + D +RSY
Sbjct: 593 GRSSFGGFGSNDGKRSY 609
Score = 153 bits (387), Expect(2) = 5e-77
Identities = 75/106 (70%), Positives = 89/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + GID+AVGTPGRIIDL+++GALNLSEV+FVVLDEADQML VGF EDVE I
Sbjct: 229 PIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEII 288
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LP ++Q M+FSATMPSW+ L+KKYL +PL +DLVG+SDQKLA
Sbjct: 289 LQKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLA 334
>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 802
Score = 166 bits (419), Expect(2) = 6e-77
Identities = 93/212 (43%), Positives = 124/212 (58%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ KGGK I+FT+TK+DA+ +S + + ALHG++ Q QR++TLA FR+G F+VLVAT
Sbjct: 322 HAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHGDISQIQRERTLAGFRNGHFNVLVAT 381
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVA+RGLDIPNVDLVIH+E+PN SEIFVHRS +L+YT+ Q R + IE+
Sbjct: 382 DVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTIER 441
Query: 615 DLGCKFDELPKVTDGIKEEMGSMDVNDGSYGRHDTRVSNPGYSGHFAERQFESYRGSRPN 436
D+GCKF ELPK+ G G +G G+ G R S+ G R
Sbjct: 442 DVGCKFSELPKIAVDTASLGGFS--GGGRFG------GGGGFGGGGGGRS-GSFGGGRSG 492
Query: 435 SYGNSNGTRNQFSKGSKKLDGYTRGHESSKKN 340
Y NS G FS + G++ G S +N
Sbjct: 493 GYSNSGG----FSGSRQSGGGFSGGSSSYGEN 520
Score = 150 bits (379), Expect(2) = 6e-77
Identities = 71/106 (66%), Positives = 89/106 (83%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+DIAVGTPGRIIDL+ +GALNL EV+FV+LDEADQML VGFQEDVE I
Sbjct: 191 PISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKI 250
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKLA 1002
L LPA++Q ++FSATMP+W+ L++ YL++PL +DLVG+SDQKLA
Sbjct: 251 LERLPAERQTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLA 296
>ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like
[Brachypodium distachyon]
Length = 604
Score = 166 bits (421), Expect(2) = 8e-77
Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Frame = -2
Query: 975 YGKGGKSIIFTRTKKDAEELSRSIGGILASRALHGNMQQFQRDKTLAAFRDGRFSVLVAT 796
+ GGK I+FT+TK++A+ L+ S+G A +ALHG++ Q QR++TL+ FR+GRF++LVAT
Sbjct: 325 HANGGKCIVFTQTKREADRLAYSMGRSYACQALHGDITQNQRERTLSGFREGRFNILVAT 384
Query: 795 DVAARGLDIPNVDLVIHFEIPNTSEIFVHRSXXXXXXXXXXXTVLIYTKAQRRAVNIIEQ 616
DVAARGLDIPNVDLV+H+EIPN+SE+FVHRS +L+YT Q RAV +IEQ
Sbjct: 385 DVAARGLDIPNVDLVVHYEIPNSSELFVHRSGRTARAGKKGIAILMYTYEQSRAVRVIEQ 444
Query: 615 DLGCKFDELPKVTDGIKEEMGSMDVNDGSYGRHDTRVSNPGY---SGHFAERQFESYRGS 445
D+GC+F ELPK++ G+ + D D R + G F + + G
Sbjct: 445 DIGCRFTELPKIS-------GTAEAADMFNVSRDPRSRSAGTRTDGSFFGRESYSGFGGR 497
Query: 444 RPNSYGNSNG 415
+G+ +G
Sbjct: 498 SSRGFGDPDG 507
Score = 149 bits (376), Expect(2) = 8e-77
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = -3
Query: 1319 PIMDQARAVRLGIDIAVGTPGRIIDLVEKGALNLSEVKFVVLDEADQMLAVGFQEDVECI 1140
PI Q R + G+D+ VGTPGRIIDL+ +G LNLSE++FVVLDEADQMLAVGF EDVE I
Sbjct: 194 PINQQMRTLNYGVDVVVGTPGRIIDLLRRGNLNLSEIQFVVLDEADQMLAVGFDEDVEVI 253
Query: 1139 LSYLPAQKQCMLFSATMPSWVNDLSKKYLRDPLVVDLVGNSDQKL 1005
+ LP +Q MLFSATMPSW+ LS +YL+DP+++DLVG SDQKL
Sbjct: 254 MEKLPQNRQSMLFSATMPSWIRKLSNQYLKDPVIIDLVGESDQKL 298