BLASTX nr result
ID: Sinomenium22_contig00017321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00017321
(836 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272014.2| PREDICTED: transcription elongation regulato... 87 8e-15
ref|XP_004236882.1| PREDICTED: pre-mRNA-processing protein 40C-l... 76 1e-11
ref|XP_006847887.1| hypothetical protein AMTR_s00029p00102340 [A... 73 2e-10
ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-l... 71 6e-10
ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-l... 71 6e-10
ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-l... 69 2e-09
ref|NP_001064893.1| Os10g0485000 [Oryza sativa Japonica Group] g... 64 7e-08
gb|EEE51166.1| hypothetical protein OsJ_31941 [Oryza sativa Japo... 64 7e-08
ref|XP_007131664.1| hypothetical protein PHAVU_011G031500g [Phas... 59 2e-06
ref|XP_007131663.1| hypothetical protein PHAVU_011G031500g [Phas... 59 2e-06
gb|AFW68545.1| hypothetical protein ZEAMMB73_527446 [Zea mays] 58 5e-06
gb|AFW68544.1| hypothetical protein ZEAMMB73_527446 [Zea mays] 58 5e-06
>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis
vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
product [Vitis vinifera]
Length = 1046
Score = 87.0 bits (214), Expect = 8e-15
Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPS---APAAGVGQQPCKSPTGN 535
M+S AWL +V+ S + PV+ GGP+ TP+ APA+ + + +G
Sbjct: 1 MASPAWLPVEVQSSAS----QNPVTGLPAGGPSGGPPTPTGAIAPASVATIRTSEGASGT 56
Query: 534 ASDTLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSA 355
AS+++QESA+ F SFSY+ +P++ ASG+SQQ + V+ SN S
Sbjct: 57 ASNSIQESAQGKFVNAPPHVLPGP--SFSYSGIPHVTTASGTSQQLPSGSVISSNPLAST 114
Query: 354 ATLQSPVPGQSSATGPSFSYNINMHNHADSFSSQQF 247
Q+PVPG SS++GPSFSYNI H A SQ F
Sbjct: 115 VVFQTPVPGPSSSSGPSFSYNI-AHKGAGFPGSQPF 149
>ref|XP_004236882.1| PREDICTED: pre-mRNA-processing protein 40C-like [Solanum
lycopersicum]
Length = 1042
Score = 76.3 bits (186), Expect = 1e-11
Identities = 61/196 (31%), Positives = 91/196 (46%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPCKSPTGNASD 526
M+S AWL Q+ + S+ ++ + + G PT STP+A D
Sbjct: 1 MASPAWLPQETQSSSSQTSVMSSAT----GEPTTSSSTPNA------------------D 38
Query: 525 TLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSAATL 346
+ QE+A+ F S+ VP SGSSQQSS++PV+ S S+A+L
Sbjct: 39 STQEAAQGKFISPPGYSVCRASFSYMNANVP-----SGSSQQSSSSPVIPSTSAGSSASL 93
Query: 345 QSPVPGQSSATGPSFSYNINMHNHADSFSSQQFLTXXXXXXXXXXXXXXXXXSAATLQSP 166
Q P+PGQS+ G SFSYNI+ ++ S S QF + AA+LQ P
Sbjct: 94 QPPIPGQSANVGSSFSYNISQTDNNFS-SGLQFSSSTLRPAAPDHSVDINASPAASLQPP 152
Query: 165 VQAQSGHPNLFITGSS 118
+ S + F+ G++
Sbjct: 153 LPLVSTRLSSFMPGTA 168
>ref|XP_006847887.1| hypothetical protein AMTR_s00029p00102340 [Amborella trichopoda]
gi|548851192|gb|ERN09468.1| hypothetical protein
AMTR_s00029p00102340 [Amborella trichopoda]
Length = 808
Score = 72.8 bits (177), Expect = 2e-10
Identities = 73/238 (30%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPCKSPTGNASD 526
MSS AWLS +V+ S P + + PL G T P P P +D
Sbjct: 1 MSSQAWLSPEVQPSAPGVPPQ-----PLTPGQTTTGGPPGP------SPPIPRPQ---ND 46
Query: 525 TLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSAATL 346
QES RA F SFSY VV + ++ ++S P + P+SA ++
Sbjct: 47 QPQESVRAKFVASPGYILPAP--SFSYGVVSQ----NNNAPRASLPP---QSTPLSAVSV 97
Query: 345 QSPVPGQSSATGPSFSYNINMHNHADSFSSQQFLTXXXXXXXXXXXXXXXXXSAATLQSP 166
Q PVPG S+ +G SFSY++ H S ++ SAA+LQ P
Sbjct: 98 QPPVPGHSATSGASFSYSVASHATTTSATASN---------PMQGGKPAGPTSAASLQPP 148
Query: 165 VQAQSG---HPNLFITGSSGQNVQDXXXXXXXXPKGAPSIAAGFSFSRAPRSLAAVDA 1
V QS HPN + QN KG PS +GFSFS +S+++ D+
Sbjct: 149 VPGQSSVSVHPNSWDPERPVQNALAQARPPFLVRKGPPS-TSGFSFSGNSQSVSSEDS 205
>ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Solanum
tuberosum]
Length = 1036
Score = 70.9 bits (172), Expect = 6e-10
Identities = 58/194 (29%), Positives = 85/194 (43%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPCKSPTGNASD 526
M+S AWL Q+ + S+ ++ + + G PT STP+A D
Sbjct: 1 MASPAWLPQETQSSSSQTSVMSSAT----GEPTTSSSTPNA------------------D 38
Query: 525 TLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSAATL 346
+ QE+A+ F S+ VP SGSSQQ S++PV+ S S+A L
Sbjct: 39 STQEAAQGKFISPPGYSVCRASFSYMNANVP-----SGSSQQPSSSPVIPSTSAGSSALL 93
Query: 345 QSPVPGQSSATGPSFSYNINMHNHADSFSSQQFLTXXXXXXXXXXXXXXXXXSAATLQSP 166
Q P+PGQS+ G SFSYNI+ ++ S Q + AA+LQ P
Sbjct: 94 QPPIPGQSANVGSSFSYNISQTDNNFSSGLQFSSSTLRPAAPDHSVDVKNASPAASLQPP 153
Query: 165 VQAQSGHPNLFITG 124
+ S + F+ G
Sbjct: 154 LPLVSTRLSSFMPG 167
>ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Solanum
tuberosum] gi|565390252|ref|XP_006360859.1| PREDICTED:
pre-mRNA-processing protein 40C-like isoform X2 [Solanum
tuberosum]
Length = 1038
Score = 70.9 bits (172), Expect = 6e-10
Identities = 58/194 (29%), Positives = 85/194 (43%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPCKSPTGNASD 526
M+S AWL Q+ + S+ ++ + + G PT STP+A D
Sbjct: 1 MASPAWLPQETQSSSSQTSVMSSAT----GEPTTSSSTPNA------------------D 38
Query: 525 TLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSAATL 346
+ QE+A+ F S+ VP SGSSQQ S++PV+ S S+A L
Sbjct: 39 STQEAAQGKFISPPGYSVCRASFSYMNANVP-----SGSSQQPSSSPVIPSTSAGSSALL 93
Query: 345 QSPVPGQSSATGPSFSYNINMHNHADSFSSQQFLTXXXXXXXXXXXXXXXXXSAATLQSP 166
Q P+PGQS+ G SFSYNI+ ++ S Q + AA+LQ P
Sbjct: 94 QPPIPGQSANVGSSFSYNISQTDNNFSSGLQFSSSTLRPAAPDHSVDVKNASPAASLQPP 153
Query: 165 VQAQSGHPNLFITG 124
+ S + F+ G
Sbjct: 154 LPLVSTRLSSFMPG 167
>ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X4 [Solanum
tuberosum]
Length = 1027
Score = 68.9 bits (167), Expect = 2e-09
Identities = 51/150 (34%), Positives = 74/150 (49%)
Frame = -3
Query: 705 MSSSAWLSQDVECSTPDINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPCKSPTGNASD 526
M+S AWL Q+ + S+ ++ + + G PT STP+A D
Sbjct: 1 MASPAWLPQETQSSSSQTSVMSSAT----GEPTTSSSTPNA------------------D 38
Query: 525 TLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMPASGSSQQSSTTPVMKSNQPVSAATL 346
+ QE+A+ F S+ VP SGSSQQ S++PV+ S S+A L
Sbjct: 39 STQEAAQGKFISPPGYSVCRASFSYMNANVP-----SGSSQQPSSSPVIPSTSAGSSALL 93
Query: 345 QSPVPGQSSATGPSFSYNINMHNHADSFSS 256
Q P+PGQS+ G SFSYNI+ + ++FSS
Sbjct: 94 QPPIPGQSANVGSSFSYNISQTD--NNFSS 121
>ref|NP_001064893.1| Os10g0485000 [Oryza sativa Japonica Group]
gi|78708826|gb|ABB47801.1| FF domain containing protein,
expressed [Oryza sativa Japonica Group]
gi|113639502|dbj|BAF26807.1| Os10g0485000 [Oryza sativa
Japonica Group]
Length = 1078
Score = 63.9 bits (154), Expect = 7e-08
Identities = 47/143 (32%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = -3
Query: 657 DINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPC--KSPTGNASDTLQESARATFXXXX 484
D + A + P + + P+APA G P P AS R F
Sbjct: 33 DSGVVAAATTPAVVDSAVEGDAPAAPAPTSGSGPAAPSMPANPASPATPGPPRPQFAGSP 92
Query: 483 XXXXXXXXPSFSYNVVPNIMP----ASGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSA 316
+FSYNV+P P SG++QQ +P V+AA LQ PVPGQ
Sbjct: 93 AYASPPAP-AFSYNVLPRPSPRPQVGSGAAQQQLASPPAMMAPSVAAAALQPPVPGQYFG 151
Query: 315 TGPSFSYNINMHNHADSFSSQQF 247
PSFSYN+ H +A + QQF
Sbjct: 152 NRPSFSYNVVSHANAGLPTGQQF 174
>gb|EEE51166.1| hypothetical protein OsJ_31941 [Oryza sativa Japonica Group]
Length = 1088
Score = 63.9 bits (154), Expect = 7e-08
Identities = 47/143 (32%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = -3
Query: 657 DINLRAPVSVPLIGGPTMVHSTPSAPAAGVGQQPC--KSPTGNASDTLQESARATFXXXX 484
D + A + P + + P+APA G P P AS R F
Sbjct: 33 DSGVVAAATTPAVVDSAVEGDAPAAPAPTSGSGPAAPSMPANPASPATPGPPRPQFAGSP 92
Query: 483 XXXXXXXXPSFSYNVVPNIMP----ASGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSA 316
+FSYNV+P P SG++QQ +P V+AA LQ PVPGQ
Sbjct: 93 AYASPPAP-AFSYNVLPRPSPRPQVGSGAAQQQLASPPAMMAPSVAAAALQPPVPGQYFG 151
Query: 315 TGPSFSYNINMHNHADSFSSQQF 247
PSFSYN+ H +A + QQF
Sbjct: 152 NRPSFSYNVVSHANAGLPTGQQF 174
>ref|XP_007131664.1| hypothetical protein PHAVU_011G031500g [Phaseolus vulgaris]
gi|561004664|gb|ESW03658.1| hypothetical protein
PHAVU_011G031500g [Phaseolus vulgaris]
Length = 830
Score = 59.3 bits (142), Expect = 2e-06
Identities = 44/104 (42%), Positives = 51/104 (49%)
Frame = -3
Query: 600 HSTPSAPAAGVGQQPCKSPTGNASDTLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMP 421
H P P +G P SPT N+S+ +A A P F Y V+ N
Sbjct: 9 HEAPP-PVSGEMSLPVASPTPNSSNATPSTAPAP----------APVPPFPYGVLQNAN- 56
Query: 420 ASGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSATGPSFSYNI 289
ASGSSQQSS V+KSN V+ Q PVPG SS SFSYNI
Sbjct: 57 ASGSSQQSSAHNVIKSNSIVNPVVFQPPVPGVSSHAALSFSYNI 100
>ref|XP_007131663.1| hypothetical protein PHAVU_011G031500g [Phaseolus vulgaris]
gi|561004663|gb|ESW03657.1| hypothetical protein
PHAVU_011G031500g [Phaseolus vulgaris]
Length = 977
Score = 59.3 bits (142), Expect = 2e-06
Identities = 44/104 (42%), Positives = 51/104 (49%)
Frame = -3
Query: 600 HSTPSAPAAGVGQQPCKSPTGNASDTLQESARATFXXXXXXXXXXXXPSFSYNVVPNIMP 421
H P P +G P SPT N+S+ +A A P F Y V+ N
Sbjct: 9 HEAPP-PVSGEMSLPVASPTPNSSNATPSTAPAP----------APVPPFPYGVLQNAN- 56
Query: 420 ASGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSATGPSFSYNI 289
ASGSSQQSS V+KSN V+ Q PVPG SS SFSYNI
Sbjct: 57 ASGSSQQSSAHNVIKSNSIVNPVVFQPPVPGVSSHAALSFSYNI 100
>gb|AFW68545.1| hypothetical protein ZEAMMB73_527446 [Zea mays]
Length = 634
Score = 57.8 bits (138), Expect = 5e-06
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Frame = -3
Query: 615 GPTMVHSTPSAPAAG-----VGQQPCKSPTGNASDTLQESARATFXXXXXXXXXXXXPSF 451
GP + + P++PA V P SP A S A +F
Sbjct: 61 GPALATTPPASPATSAAPPPVSPAPLVSPAPPAEPGPPRSQFAGSLSYIAPGTPSPSAAF 120
Query: 450 SYNVVPNIMPA-----SGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSATGPSFSYNIN 286
SYNV+P PA + +S Q ++P + P+ A+ LQ P PGQ PSFSYN+
Sbjct: 121 SYNVLPRAPPAPQVGGAAASLQPCSSPALMV-APIPASALQPPAPGQYFGNRPSFSYNVV 179
Query: 285 MHNHADSFSSQQF 247
H +A + QQF
Sbjct: 180 SHANARLPTGQQF 192
>gb|AFW68544.1| hypothetical protein ZEAMMB73_527446 [Zea mays]
Length = 261
Score = 57.8 bits (138), Expect = 5e-06
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Frame = -3
Query: 615 GPTMVHSTPSAPAAG-----VGQQPCKSPTGNASDTLQESARATFXXXXXXXXXXXXPSF 451
GP + + P++PA V P SP A S A +F
Sbjct: 61 GPALATTPPASPATSAAPPPVSPAPLVSPAPPAEPGPPRSQFAGSLSYIAPGTPSPSAAF 120
Query: 450 SYNVVPNIMPA-----SGSSQQSSTTPVMKSNQPVSAATLQSPVPGQSSATGPSFSYNIN 286
SYNV+P PA + +S Q ++P + P+ A+ LQ P PGQ PSFSYN+
Sbjct: 121 SYNVLPRAPPAPQVGGAAASLQPCSSPALMV-APIPASALQPPAPGQYFGNRPSFSYNVV 179
Query: 285 MHNHADSFSSQQF 247
H +A + QQF
Sbjct: 180 SHANARLPTGQQF 192