BLASTX nr result
ID: Sinomenium22_contig00016965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00016965
(1230 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 314 4e-83
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 314 4e-83
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 313 1e-82
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 313 1e-82
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 299 1e-78
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 299 2e-78
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 298 3e-78
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 298 4e-78
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 291 5e-76
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 291 5e-76
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 286 2e-74
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6... 285 4e-74
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 285 4e-74
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 284 6e-74
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun... 281 4e-73
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 281 5e-73
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 279 2e-72
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 278 3e-72
gb|AFK40562.1| unknown [Lotus japonicus] 265 2e-68
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s... 252 2e-64
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 314 bits (805), Expect = 4e-83
Identities = 153/232 (65%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Frame = -3
Query: 979 SLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLN 800
SLKRKRP+ + SQ L DAE+ +YD IRSKE MGIW+ D+KRET L D++ KSLK+L
Sbjct: 8 SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQV 67
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K+LIKEVVNIQS+ +KHYMAVEFEPS ELTGGAWYV+G LD ++I +LKE C+R + KLK
Sbjct: 68 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLK 127
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT EGI ESI K+GL EC+TQQI EI+R LV DNE+MEV S+ +G+F++IP G VCY
Sbjct: 128 VATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY 187
Query: 439 KSSNKQGV----PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+ +NK G+ P +GA+ASIPCGVCPRI +CTPDGIISP TC YYTKWLDF
Sbjct: 188 RCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 314 bits (805), Expect = 4e-83
Identities = 152/235 (64%), Positives = 188/235 (80%), Gaps = 4/235 (1%)
Frame = -3
Query: 988 ENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKS 809
+ LSLKRKRP+ + SQ L DAE+ +YD IRSKE MGIW+ D+KRET L D++ KSLK+
Sbjct: 5 QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKA 64
Query: 808 LLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIY 629
L K+LIKEVVNIQS+ +KHYMAVEFEPS ELTGGAWYV+G LD ++I +LKE C++ +
Sbjct: 65 LQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLS 124
Query: 628 KLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGT 449
KLKVAT EGI ESI K+GL EC+TQQI EI+R LV DNE+MEV S+ +G+F++IP G
Sbjct: 125 KLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGA 184
Query: 448 VCYKSSNKQGV----PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
VCY+ +NK G+ PK+GA+ASIPCGVCPRI +CTPDGIISP +C YY KWLDF
Sbjct: 185 VCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 313 bits (801), Expect = 1e-82
Identities = 152/232 (65%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Frame = -3
Query: 979 SLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLN 800
SLKRKRP+ + SQ L DAE+ +YD IRSKE MGIW+ D+KRET L D++ KSLK+L
Sbjct: 69 SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQV 128
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K+LIKEVVNIQS+ +KHYMAVEFEPS ELTGGAWYV+G LD ++I +LK+ C+R + KLK
Sbjct: 129 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLK 188
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT EGI ESI K+GL EC+TQQI EI+R LV DNE+MEV S+ +G+F++IP G VCY
Sbjct: 189 VATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY 248
Query: 439 KSSNKQGV----PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+ +NK G+ P +GA+ASIPCGVCPRI +CTPDGIISP TC YYTKWLDF
Sbjct: 249 RCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 313 bits (801), Expect = 1e-82
Identities = 152/232 (65%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Frame = -3
Query: 979 SLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLN 800
SLKRKRP+ + SQ L DAE+ +YD IRSKE MGIW+ D+KRET L D++ KSLK+L
Sbjct: 8 SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQV 67
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K+LIKEVVNIQS+ +KHYMAVEFEPS ELTGGAWYV+G LD ++I +LK+ C+R + KLK
Sbjct: 68 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLK 127
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT EGI ESI K+GL EC+TQQI EI+R LV DNE+MEV S+ +G+F++IP G VCY
Sbjct: 128 VATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY 187
Query: 439 KSSNKQGV----PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+ +NK G+ P +GA+ASIPCGVCPRI +CTPDGIISP TC YYTKWLDF
Sbjct: 188 RCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 299 bits (766), Expect = 1e-78
Identities = 147/231 (63%), Positives = 179/231 (77%), Gaps = 5/231 (2%)
Frame = -3
Query: 973 KRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRE--TELADSLFAKSLKSLLN 800
KRKRPE +PS +L+D E+ IYD IRSK+ MGIW+ D+KRE L D++ KS+KSL N
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K LIKEVVNI S+ KKH MAVEFEPS E++GGAWY +G LD +FI V+K QCL+ I KLK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT+EGI +SI++SG K++ T QQI EIVR LV DN++MEV S +G+F NIP G VCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 439 KSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
K+ +K G PK G+LASIPCGVCP+IN CTPDG+ISP TCVYYT WLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 299 bits (765), Expect = 2e-78
Identities = 144/238 (60%), Positives = 189/238 (79%), Gaps = 2/238 (0%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M R+ E SLKRK+P+ +SP +L++ E+ IY+ IRSK+ MGIW D+KR ++ D++
Sbjct: 1 MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
K+LKSL K+LIKEVVNIQ R KKHY+A EFEP+ E+TGGAWY +GK+D IN+LK+QC
Sbjct: 61 KALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQC 120
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
L+ IYK +VAT+EGIL++IRKSG+ +E TT QI E+VR LV DNEV+EV S G+F +
Sbjct: 121 LKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDS 180
Query: 463 IPFGTVCYKSSNK--QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
IP G VCYKS++K +G PK+GA++SIPCGVCPRI++CTPDGIISP TC YY++WLDF
Sbjct: 181 IPVGKVCYKSTSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLDF 238
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 298 bits (763), Expect = 3e-78
Identities = 146/231 (63%), Positives = 179/231 (77%), Gaps = 5/231 (2%)
Frame = -3
Query: 973 KRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRE--TELADSLFAKSLKSLLN 800
KRKRP+ +PS +L+D E+ IYD IRSK+ MGIW+ D+KRE L D++ KS+KSL N
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K LIKEVVNI S+ KKH MAVEFEPS E++GGAWY +G LD +FI V+K QCL+ I KLK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT+EGI +SI++SG K++ T QQI EIVR LV DN++MEV S +G+F NIP G VCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 439 KSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
K+ +K G PK G+LASIPCGVCP+IN C PDG+ISP TCVYYTKWLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 298 bits (762), Expect = 4e-78
Identities = 146/229 (63%), Positives = 183/229 (79%), Gaps = 4/229 (1%)
Frame = -3
Query: 988 ENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKS 809
+ LSLKRKRP+ + SQ L DAE+ +YD IRSKE MGIW+ D+KRET L D++ KSLK+
Sbjct: 95 QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKA 154
Query: 808 LLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIY 629
L K+LIKEVVNIQS+ +KHYMAVEFEPS ELTGGAWYV+G LD ++I +LKE C++ +
Sbjct: 155 LQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLS 214
Query: 628 KLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGT 449
KLKVAT EGI ESI K+GL EC+TQQI EI+R LV DNE+MEV S+ +G+F++IP G
Sbjct: 215 KLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGA 274
Query: 448 VCYKSSNKQGV----PKVGALASIPCGVCPRINECTPDGIISPTTCVYY 314
VCY+ +NK G+ PK+GA+ASIPCGVCPRI +CTPDGIISP + V+Y
Sbjct: 275 VCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 291 bits (744), Expect = 5e-76
Identities = 143/232 (61%), Positives = 180/232 (77%), Gaps = 6/232 (2%)
Frame = -3
Query: 973 KRKRPEGKSPSQNLSDAEQKIYDCIRS-KEGMGIWSMDIKRETE--LADSLFAKSLKSLL 803
KRKRP+ +PS +L+D E+ IYD IRS K+ MGIW+ D+KRE + L D++ KS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 802 NKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKL 623
NK LIKEVVNI ++ KKH MAVEFEPS E++GGAWY +G LD +FI V+K QCL+ I KL
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 622 KVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVC 443
KVAT+EGI +SI++SG K++ T QQI EIVR +V DN++MEV S +G+F NIP G VC
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 442 YKSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
YK+ +K G PK G+ AS+PCGVCP+IN CTPDG+ISP TCVYYTKWLDF
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 291 bits (744), Expect = 5e-76
Identities = 143/232 (61%), Positives = 180/232 (77%), Gaps = 6/232 (2%)
Frame = -3
Query: 973 KRKRPEGKSPSQNLSDAEQKIYDCIRS-KEGMGIWSMDIKRETE--LADSLFAKSLKSLL 803
KRKRP+ +PS +L+D E+ IYD IRS K+ MGIW+ D+KRE + L D++ KS+KSL
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 802 NKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKL 623
NK LIKEVVNI ++ KKH MAVEFEPS E++GGAWY +G LD +FI V+K QCL+ I KL
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 622 KVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVC 443
KVAT+EGI +SI++SG K++ T QQI EIVR +V DN++MEV S +G+F NIP G VC
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 442 YKSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
YK+ +K G PK G+ AS+PCGVCP+IN CTPDG+ISP TCVYYTKWLDF
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 252
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 286 bits (731), Expect = 2e-74
Identities = 139/231 (60%), Positives = 177/231 (76%), Gaps = 3/231 (1%)
Frame = -3
Query: 979 SLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLN 800
+LKRK+PE SP+Q+L++ E +Y+ I SK+ MGIW+ D+KRET L D++ KSLK L
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K LIKEVVNIQ++ +KHYMA EFEPS E+TGGAWYV+G LD +FI +LKE C + + KLK
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT+EGI +SI++SG+ E T QQI EIV+ LV DN ++EV S +F+ IP G VCY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 439 KSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
K K G P++GA+ASIPCGVCPRI++CTPDGIISP TCVYY+KWLDF
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236
>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|590615245|ref|XP_007023169.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 285 bits (728), Expect = 4e-74
Identities = 144/239 (60%), Positives = 181/239 (75%), Gaps = 3/239 (1%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M R+ +LKRKRP S S L++ E+ ++D I+ K+ MGI D+KRE L D+L
Sbjct: 1 MSRLQGPNALKRKRPGATSDS--LTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVT 58
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
K LKSLL K LIKEV NIQ+R +KH+++ EFEPSNE+TGGAWYV+G LD ++INVLKEQC
Sbjct: 59 KCLKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQC 118
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
R IY LKVAT+EG+ ++I++S + +IE + QQI EIV+ LV DNEVMEV S+ TG+FA+
Sbjct: 119 WRKIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFAS 178
Query: 463 IPFGTVCYKSSNKQGV---PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
IP G VCYK K+G PKVG +ASIPCGVCP+I+ CTPDGIISP TCVYY KWLDF
Sbjct: 179 IPVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLDF 237
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine
max]
Length = 239
Score = 285 bits (728), Expect = 4e-74
Identities = 138/239 (57%), Positives = 181/239 (75%), Gaps = 3/239 (1%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M + + SLKRKR + + +L+D E+ +Y+ I SK+ MGIW+ D+KRET L DS+
Sbjct: 1 MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
KSLK L +K LIKEVVNIQ++ +KHYMA EFEPS E+TGG WY G+LD DFIN++K+ C
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
L++I++ KVAT +G++E RKSG+ +E TTQQI EI+R LV D+E++EV ST GDF++
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180
Query: 463 IPFGTVCYKSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+P G +CY+ +K +G K GA+ASIPCGVCPRIN CTPDGIISP TCVYY KWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 284 bits (726), Expect = 6e-74
Identities = 140/239 (58%), Positives = 179/239 (74%), Gaps = 3/239 (1%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M ++ E+ SLKRKR + S +++D E+ +Y+ I SK+ MGIW+ D+KRET L DS+
Sbjct: 1 MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
KSLK L +K LIKEVVNIQ++ +KHYMA EFEPS E+TGG WY G LD DFIN++KE C
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVC 120
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
L+ I++ KVAT +G+LE RKSG+ +E T QQI EI+R LV D+E+ EV ST GDF++
Sbjct: 121 LKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSS 180
Query: 463 IPFGTVCYKSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+P G +CY+ +K +G K GA+ASIPCGVCPRIN CTPDGIISP TCVYY KWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
gi|462404542|gb|EMJ10006.1| hypothetical protein
PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 281 bits (719), Expect = 4e-73
Identities = 137/231 (59%), Positives = 176/231 (76%), Gaps = 3/231 (1%)
Frame = -3
Query: 979 SLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLN 800
+LKRK+P+ SPS++L++ E+ +Y IRSK+ MGIW+ D+K+E L D+L KS+KSL
Sbjct: 6 ALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQA 65
Query: 799 KQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLK 620
K LIKEVVN+QS+ +KHYMA EFEPS ELTGG WY +G LD +I+ +K+ + IY+LK
Sbjct: 66 KNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLK 125
Query: 619 VATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCY 440
VAT+EGI + ++KSG+ K T QQI EI+R LV D V EV ST G+F + P G VCY
Sbjct: 126 VATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCY 185
Query: 439 KSSNKQG---VPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
KS++K G PKVGA+ASIPCGVCPRI++CTPDGIISP TCVY+TKWLDF
Sbjct: 186 KSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 281 bits (718), Expect = 5e-73
Identities = 137/239 (57%), Positives = 179/239 (74%), Gaps = 3/239 (1%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M R+ SLKRKRPE SP+Q+L++ E+ +YD IRSK+ +GIW+ D+K+E +L D++
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
KSLK+L K+LIKEVVNIQ++ +KH+MA EFEPS E++GGAWY++G LD +FI LK+ C
Sbjct: 61 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
R I + VAT+E + +SI ++ T QQI EI+R L+ DN +MEV S G+FA+
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180
Query: 463 IPFGTVCYKSSNKQGV---PKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
IPFG VCYK +K G+ PK GALASIPCGVCPRI++CTPDGIISP TCVYY KWLDF
Sbjct: 181 IPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 279 bits (714), Expect = 2e-72
Identities = 136/228 (59%), Positives = 172/228 (75%), Gaps = 2/228 (0%)
Frame = -3
Query: 973 KRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKSLLNKQ 794
KRK+PE S +Q+L++ EQ +Y+ IRSK+ MGIW+ D+KRET L D++ KSLK L K
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 793 LIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIYKLKVA 614
LIKEVVNIQ++ +K+YMA EFEPS E+TGG WYV+G LD FI VLK+QC + I KLKVA
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 613 TIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGTVCYKS 434
T+E + + I ++G+ + T QQI EI++ LV DN+V EV S G+FA+IP G VCYKS
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187
Query: 433 SNK--QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
K G PK+GA+ASIPCGVCPRI CTP+GIISP TCVYY KWL+F
Sbjct: 188 IGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 278 bits (712), Expect = 3e-72
Identities = 139/246 (56%), Positives = 178/246 (72%), Gaps = 3/246 (1%)
Frame = -3
Query: 1024 FNCLLT*MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETE 845
F+ L M RV SLKRKRPE SP Q+L++ E+ +YD IRSK+ +GIW+ D+K+E +
Sbjct: 46 FDVLSVGMSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAK 105
Query: 844 LADSLFAKSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFI 665
L D++ KSLK+L K LIKEVVNIQ++ +KH+MA EFEPS E++GGAWY++G LD +FI
Sbjct: 106 LPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFI 165
Query: 664 NVLKEQCLRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWST 485
L++ C R I K VAT+E + +SI ++ T QQI EI+R L+ DN +MEV S
Sbjct: 166 ESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSN 225
Query: 484 ETGDFANIPFGTVCYKSSNK---QGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYY 314
G+FA+IPFG VCY+ +K G PK GALASIPCGVCPRI+ CTPDGIISP TCVYY
Sbjct: 226 GMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYY 285
Query: 313 TKWLDF 296
KWLDF
Sbjct: 286 QKWLDF 291
>gb|AFK40562.1| unknown [Lotus japonicus]
Length = 232
Score = 265 bits (678), Expect = 2e-68
Identities = 133/239 (55%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = -3
Query: 1003 MGRVPENLSLKRKRPEGKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFA 824
M R+P + SLKRKRP+ L+D E +Y I SKE MGIW DIKRET++ D++
Sbjct: 1 MSRLPGSSSLKRKRPD-------LTDGEDVVYKLIHSKENMGIWIADIKRETKMPDNMVK 53
Query: 823 KSLKSLLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQC 644
K +KSL +K L+KEVVNIQSR KK YMAV+FEPS ELTGG WY DGK D DFIN K+
Sbjct: 54 KCIKSLQDKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVF 113
Query: 643 LRHIYKLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFAN 464
L++++K KVAT +G+LE RK+ + ++ T QQ+ EI+R LV D+E++EV ST +FA+
Sbjct: 114 LKYVFKQKVATCDGVLEWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFAS 173
Query: 463 IPFGTVCYKS-SNKQGVPKVGALASIPCGVCPRINECTP--DGIISPTTCVYYTKWLDF 296
+P G +CYKS +G K GA+ASIPCGVCPRI +C P DG ISP TC Y+ KWLDF
Sbjct: 174 VPKGKICYKSKGGVRGEKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWLDF 232
>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Cucumis sativus] gi|449506569|ref|XP_004162785.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Cucumis sativus]
Length = 243
Score = 252 bits (644), Expect = 2e-64
Identities = 131/235 (55%), Positives = 165/235 (70%), Gaps = 7/235 (2%)
Frame = -3
Query: 979 SLKRKRPE---GKSPSQNLSDAEQKIYDCIRSKEGMGIWSMDIKRETELADSLFAKSLKS 809
SLKRKRP+ S L E+ +YD I SK+ MGI + D+KRET+ A+S+ KSLKS
Sbjct: 9 SLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKS 68
Query: 808 LLNKQLIKEVVNIQSRWKKHYMAVEFEPSNELTGGAWYVDGKLDIDFINVLKEQCLRHIY 629
L K LIK V + Q++ KK Y++ +FEP+ ELTGG WY DG+LD D+IN LK+ C R I
Sbjct: 69 LQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQ 128
Query: 628 KLKVATIEGILESIRKSGLLKIECTTQQITEIVRNLVWDNEVMEVWSTETGDFANIPFGT 449
+ K+ TIEGI+ES ++SG K+E + +QI EIV LV DN+VMEV S+ G+F IP G
Sbjct: 129 RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGK 188
Query: 448 VCYK----SSNKQGVPKVGALASIPCGVCPRINECTPDGIISPTTCVYYTKWLDF 296
+CYK +G PK GA+ASIPCGVCPRI CTP+GIISP TCVYYTKWLDF
Sbjct: 189 ICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF 243