BLASTX nr result

ID: Sinomenium22_contig00016949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00016949
         (523 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...    51   6e-07

>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score = 50.8 bits (120), Expect(2) = 6e-07
 Identities = 28/51 (54%), Positives = 39/51 (76%)
 Frame = +1

Query: 19  LESSLHKSMVFTSNTDIEDGSIEEVAEAEALMILYEECLHRNYKSMEKLRK 171
           LE+ L + M+ + NT IEDGS+EEVAE   LMI++EECL  NY ++E+LR+
Sbjct: 81  LENILDEGMI-SLNTMIEDGSVEEVAEK--LMIMHEECLEGNYHTIEQLRQ 128



 Score = 28.1 bits (61), Expect(2) = 6e-07
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 212 SEDGDKTLAKEASVMVADEPKQRLESKLKDMSMTRQKPR-GSVRNEDVWSFVATQSDWG 385
           S+D D ++    S M+ D PK   +SK  ++ M   +P     + ED W+ ++++ + G
Sbjct: 154 SDDDDNSMGDNRSNMMMDAPK--FQSKPNEVDMQVNEPSCQEAQVEDEWTVISSKKNRG 210


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